RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 SPDYE16A6NNV3 312 aaPredicted RBP6.2□□□□□ -1.42
IFT43-208ENST00000554423 EVI5O60447 810 aa6.2□□□□□ -1.42
IFT43-208ENST00000554423 ITGBL1O95965 494 aaPredicted RBP6.2□□□□□ -1.42
IFT43-208ENST00000554423 VSIG10Q8N0Z9 540 aa6.2□□□□□ -1.42
IFT43-208ENST00000554423 MRPL50Q8N5N7 158 aaKnown RBP6.2□□□□□ -1.42
IFT43-208ENST00000554423 ANO8Q9HCE9 1232 aaPredicted RBP6.19□□□□□ -1.42
IFT43-208ENST00000554423 EMILIN3Q9NT22 766 aa6.19□□□□□ -1.42
IFT43-208ENST00000554423 NRG2O14511 850 aaPredicted RBP6.18□□□□□ -1.42
IFT43-208ENST00000554423 ARIH1Q9Y4X5 557 aaPredicted RBP6.18□□□□□ -1.42
IFT43-208ENST00000554423 KDM4FA0A1W2PPD8 638 aa6.17□□□□□ -1.42
IFT43-208ENST00000554423 DPYSL4O14531 572 aa6.17□□□□□ -1.42
IFT43-208ENST00000554423 ARHGEF1Q92888 912 aaKnown RBP6.17□□□□□ -1.42
IFT43-208ENST00000554423 BHMG1C9JSJ3 638 aaPredicted RBP6.15□□□□□ -1.42
IFT43-208ENST00000554423 KCNC4Q03721 635 aa6.15□□□□□ -1.42
IFT43-208ENST00000554423 ZNF454Q8N9F8 522 aa6.15□□□□□ -1.42
IFT43-208ENST00000554423 FBXW7Q969H0 707 aa6.15□□□□□ -1.42
IFT43-208ENST00000554423 JPH4Q96JJ6 628 aa6.15□□□□□ -1.42
IFT43-208ENST00000554423 EPAS1Q99814 870 aa6.15□□□□□ -1.42
IFT43-208ENST00000554423 SLC4A5Q9BY07 1137 aa6.15□□□□□ -1.42
IFT43-208ENST00000554423 PHF14O94880 888 aa6.13□□□□□ -1.43
IFT43-208ENST00000554423 FOSBP53539 338 aa6.13□□□□□ -1.43
IFT43-208ENST00000554423 PDIA6Q15084 440 aa6.13□□□□□ -1.43
IFT43-208ENST00000554423 TYW1BQ6NUM6 668 aa6.13□□□□□ -1.43
IFT43-208ENST00000554423 ZDHHC16Q969W1 377 aa6.13□□□□□ -1.43
IFT43-208ENST00000554423 NBPF3Q9H094 633 aa6.12□□□□□ -1.43
IFT43-208ENST00000554423 PTPREP23469 700 aa6.11□□□□□ -1.43
IFT43-208ENST00000554423 SMYD5Q6GMV2 418 aa6.1□□□□□ -1.43
IFT43-208ENST00000554423 ANKK1Q8NFD2 765 aa6.1□□□□□ -1.43
IFT43-208ENST00000554423 BCL2L12Q9HB09 334 aa6.1□□□□□ -1.43
IFT43-208ENST00000554423 KCNV2Q8TDN2 545 aa6.09□□□□□ -1.43
IFT43-208ENST00000554423 DDX12PQ92771 950 aa6.09□□□□□ -1.43
IFT43-208ENST00000554423 PRKD2Q9BZL6 878 aa6.09□□□□□ -1.43
IFT43-208ENST00000554423 GRXCR2A6NFK2 248 aa6.08□□□□□ -1.44
IFT43-208ENST00000554423 TULP1O00294 542 aaPredicted RBP6.08□□□□□ -1.44
IFT43-208ENST00000554423 ZBED2Q9BTP6 218 aa6.08□□□□□ -1.44
IFT43-208ENST00000554423 PCDHGA10Q9Y5H3 936 aa6.08□□□□□ -1.44
IFT43-208ENST00000554423 LOC100996750A0A140TA64 210 aa6.07□□□□□ -1.44
IFT43-208ENST00000554423 NBR1Q14596 966 aa6.07□□□□□ -1.44
IFT43-208ENST00000554423 NYAP1Q6ZVC0 841 aa6.07□□□□□ -1.44
IFT43-208ENST00000554423 KRTAP4-6Q9BYQ5 205 aa6.07□□□□□ -1.44
IFT43-208ENST00000554423 KDM2AQ9Y2K7 1162 aa6.07□□□□□ -1.44
IFT43-208ENST00000554423 PDZRN3Q9UPQ7 1066 aa6.06□□□□□ -1.44
IFT43-208ENST00000554423 MAP3K7O43318 606 aa6.05□□□□□ -1.44
IFT43-208ENST00000554423 BCAMP50895 628 aa6.05□□□□□ -1.44
IFT43-208ENST00000554423 CERKQ8TCT0 537 aa6.05□□□□□ -1.44
IFT43-208ENST00000554423 ADAM33Q9BZ11 813 aa6.05□□□□□ -1.44
IFT43-208ENST00000554423 C6orf132Q5T0Z8 1188 aa6.04□□□□□ -1.44
IFT43-208ENST00000554423 RBM33Q96EV2 1170 aaKnown RBP6.04□□□□□ -1.44
IFT43-208ENST00000554423 PPP1R3GB7ZBB8 358 aa6.03□□□□□ -1.44
IFT43-208ENST00000554423 EN1Q05925 392 aaPredicted RBP6.03□□□□□ -1.44
IFT43-208ENST00000554423 SOWAHBA6NEL2 793 aa6.02□□□□□ -1.45
IFT43-208ENST00000554423 ONECUT3O60422 494 aaPredicted RBP6.02□□□□□ -1.45
IFT43-208ENST00000554423 TREML4Q6UXN2 200 aa6.02□□□□□ -1.45
IFT43-208ENST00000554423 PACS2Q86VP3 889 aa6.01□□□□□ -1.45
IFT43-208ENST00000554423 WBP1LQ9NX94 342 aa6.01□□□□□ -1.45
IFT43-208ENST00000554423 V9GY48 417 aaPredicted RBP6.01□□□□□ -1.45
IFT43-208ENST00000554423 OSBPP22059 807 aa6□□□□□ -1.45
IFT43-208ENST00000554423 STK17AQ9UEE5 414 aa6□□□□□ -1.45
IFT43-208ENST00000554423 SEMA3EO15041 775 aa5.99□□□□□ -1.45
IFT43-208ENST00000554423 SLC24A1O60721 1099 aa5.99□□□□□ -1.45
IFT43-208ENST00000554423 TESPA1A2RU30 521 aaPredicted RBP5.98□□□□□ -1.45
IFT43-208ENST00000554423 RABGEF1Q9UJ41 708 aa5.98□□□□□ -1.45
IFT43-208ENST00000554423 NUTM2FA1L443 756 aa5.97□□□□□ -1.45
IFT43-208ENST00000554423 MLLT3P42568 568 aaPredicted RBP5.97□□□□□ -1.45
IFT43-208ENST00000554423 PRSS12P56730 875 aa5.97□□□□□ -1.45
IFT43-208ENST00000554423 TRIM6-TRIM34B2RNG4 842 aa5.96□□□□□ -1.46
IFT43-208ENST00000554423 POTECB2RU33 542 aa5.96□□□□□ -1.46
IFT43-208ENST00000554423 COL9A1P20849 921 aa5.96□□□□□ -1.46
IFT43-208ENST00000554423 TSR1Q2NL82 804 aaKnown RBP5.96□□□□□ -1.46
IFT43-208ENST00000554423 LAPTM4BQ86VI4 370 aa5.96□□□□□ -1.46
IFT43-208ENST00000554423 KIAA1468Q9P260 1216 aa5.96□□□□□ -1.46
IFT43-208ENST00000554423 RBM27Q9P2N5 1060 aaKnown RBP5.96□□□□□ -1.46
IFT43-208ENST00000554423 FCHSD2O94868 740 aa5.95□□□□□ -1.46
IFT43-208ENST00000554423 HDGFP51858 240 aaKnown RBP5.95□□□□□ -1.46
IFT43-208ENST00000554423 CDCA7LQ96GN5 454 aa5.95□□□□□ -1.46
IFT43-208ENST00000554423 PKDCCQ504Y2 493 aa5.94□□□□□ -1.46
IFT43-208ENST00000554423 LCE2AQ5TA79 106 aaPredicted RBP5.94□□□□□ -1.46
IFT43-208ENST00000554423 ZFRQ96KR1 1074 aaKnown RBP5.94□□□□□ -1.46
IFT43-208ENST00000554423 NBPF26B4DH59 902 aa5.93□□□□□ -1.46
IFT43-208ENST00000554423 SLC4A3P48751 1232 aa5.93□□□□□ -1.46
IFT43-208ENST00000554423 PROX2Q3B8N5 592 aa5.93□□□□□ -1.46
IFT43-208ENST00000554423 PPP1R18Q6NYC8 613 aa5.93□□□□□ -1.46
IFT43-208ENST00000554423 INSM1Q01101 510 aaPredicted RBP5.92□□□□□ -1.46
IFT43-208ENST00000554423 TSR3Q9UJK0 312 aaKnown RBP5.92□□□□□ -1.46
IFT43-208ENST00000554423 PRIM1P49642 420 aaKnown RBP5.91□□□□□ -1.46
IFT43-208ENST00000554423 MYT1Q01538 1121 aa5.91□□□□□ -1.46
IFT43-208ENST00000554423 PTGDRQ13258 359 aa5.91□□□□□ -1.46
IFT43-208ENST00000554423 HIC1Q14526 733 aa5.91□□□□□ -1.46
IFT43-208ENST00000554423 FAM98CQ17RN3 349 aaKnown RBP5.91□□□□□ -1.46
IFT43-208ENST00000554423 HPS5Q9UPZ3 1129 aa5.91□□□□□ -1.46
IFT43-208ENST00000554423 RBM26Q5T8P6 1007 aaKnown RBP5.9□□□□□ -1.46
IFT43-208ENST00000554423 NECTIN2Q92692 538 aa5.9□□□□□ -1.46
IFT43-208ENST00000554423 TATDN2Q93075 761 aa5.9□□□□□ -1.46
IFT43-208ENST00000554423 NPDC1Q9NQX5 325 aaPredicted RBP5.9□□□□□ -1.46
IFT43-208ENST00000554423 WFS1O76024 890 aa5.89□□□□□ -1.47
IFT43-208ENST00000554423 OATP04181 439 aa5.89□□□□□ -1.47
IFT43-208ENST00000554423 GPIHBP1Q8IV16 184 aa5.89□□□□□ -1.47
IFT43-208ENST00000554423 RBM46Q8TBY0 533 aaKnown RBP5.89□□□□□ -1.47
IFT43-208ENST00000554423 LRCH3Q96II8 777 aa5.89□□□□□ -1.47
IFT43-208ENST00000554423 CDHR5Q9HBB8 845 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms