RNA–Protein interactions for RNA: ENST00000554417.1

HNRNPC-210, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-210ENST00000554417 GPATCH8Q9UKJ3 1502 aaKnown RBP11.21□□□□□ -0.61
HNRNPC-210ENST00000554417 ARHGAP5Q13017 1502 aa11.2□□□□□ -0.62
HNRNPC-210ENST00000554417 AKNAQ7Z591 1439 aa11.2□□□□□ -0.62
HNRNPC-210ENST00000554417 KIAA1107Q9UPP5 1409 aa11.2□□□□□ -0.62
HNRNPC-210ENST00000554417 MYO5CQ9NQX4 1742 aa11.2□□□□□ -0.62
HNRNPC-210ENST00000554417 ITSN2Q9NZM3 1697 aa11.2□□□□□ -0.62
HNRNPC-210ENST00000554417 MYOM3Q5VTT5 1437 aa11.19□□□□□ -0.62
HNRNPC-210ENST00000554417 KIF12Q96FN5 646 aa11.19□□□□□ -0.62
HNRNPC-210ENST00000554417 BMP2KQ9NSY1 1161 aaPredicted RBP11.19□□□□□ -0.62
HNRNPC-210ENST00000554417 TTC37Q6PGP7 1564 aa11.19□□□□□ -0.62
HNRNPC-210ENST00000554417 TSPYL2Q9H2G4 693 aaPredicted RBP11.18□□□□□ -0.62
HNRNPC-210ENST00000554417 PREX2Q70Z35 1606 aa11.17□□□□□ -0.62
HNRNPC-210ENST00000554417 DENND4BO75064 1496 aaPredicted RBP11.17□□□□□ -0.62
HNRNPC-210ENST00000554417 ADGRL1O94910 1474 aa11.17□□□□□ -0.62
HNRNPC-210ENST00000554417 ZNF777Q9ULD5 760 aaPredicted RBP11.16□□□□□ -0.62
HNRNPC-210ENST00000554417 SCAPERQ9BY12 1400 aa11.16□□□□□ -0.62
HNRNPC-210ENST00000554417 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.16□□□□□ -0.62
HNRNPC-210ENST00000554417 TSPY4P0CV99 314 aa11.15□□□□□ -0.62
HNRNPC-210ENST00000554417 TSPY10P0CW01 314 aa11.15□□□□□ -0.62
HNRNPC-210ENST00000554417 ZNF518AQ6AHZ1 1483 aa11.14□□□□□ -0.63
HNRNPC-210ENST00000554417 MAGI2Q86UL8 1455 aa11.14□□□□□ -0.63
HNRNPC-210ENST00000554417 PPRC1Q5VV67 1664 aaKnown RBP11.14□□□□□ -0.63
HNRNPC-210ENST00000554417 KDM6BO15054 1643 aa11.13□□□□□ -0.63
HNRNPC-210ENST00000554417 TSPOAP1O95153 1857 aa11.13□□□□□ -0.63
HNRNPC-210ENST00000554417 CDC42BPAQ5VT25 1732 aa11.13□□□□□ -0.63
HNRNPC-210ENST00000554417 TIE1P35590 1138 aa11.13□□□□□ -0.63
HNRNPC-210ENST00000554417 TRPC6Q9Y210 931 aa11.13□□□□□ -0.63
HNRNPC-210ENST00000554417 FGD6Q6ZV73 1430 aa11.12□□□□□ -0.63
HNRNPC-210ENST00000554417 CDAN1Q8IWY9 1227 aa11.12□□□□□ -0.63
HNRNPC-210ENST00000554417 CDC42BPBQ9Y5S2 1711 aa11.12□□□□□ -0.63
HNRNPC-210ENST00000554417 POGZQ7Z3K3 1410 aa11.1□□□□□ -0.63
HNRNPC-210ENST00000554417 ABCC1P33527 1531 aa11.1□□□□□ -0.63
HNRNPC-210ENST00000554417 TCOF1Q13428 1488 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-210ENST00000554417 RTEL1-TNFRSF6BF6WH68 1400 aa11.09□□□□□ -0.63
HNRNPC-210ENST00000554417 CAMSAP2Q08AD1 1489 aa11.09□□□□□ -0.63
HNRNPC-210ENST00000554417 HNRNPMP52272 730 aaKnown RBP eCLIP11.09□□□□□ -0.637e-7■■■■□ 20.1
HNRNPC-210ENST00000554417 MYT1LQ9UL68 1186 aa11.09□□□□□ -0.63
HNRNPC-210ENST00000554417 COLQQ9Y215 455 aaPredicted RBP11.09□□□□□ -0.63
HNRNPC-210ENST00000554417 SPAG9O60271 1321 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-210ENST00000554417 CCDC141Q6ZP82 1450 aa11.08□□□□□ -0.64
HNRNPC-210ENST00000554417 MLH3Q9UHC1 1453 aa11.08□□□□□ -0.64
HNRNPC-210ENST00000554417 RAPGEF3O95398 923 aa11.08□□□□□ -0.64
HNRNPC-210ENST00000554417 FAM50AQ14320 339 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-210ENST00000554417 RRBP1Q9P2E9 1410 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-210ENST00000554417 ACIN1Q9UKV3 1341 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-210ENST00000554417 ARHGEF5Q12774 1597 aa11.07□□□□□ -0.64
HNRNPC-210ENST00000554417 SAMD9LQ8IVG5 1584 aa11.07□□□□□ -0.64
HNRNPC-210ENST00000554417 MBD5Q9P267 1494 aa11.07□□□□□ -0.64
HNRNPC-210ENST00000554417 AFAP1Q8N556 730 aa11.07□□□□□ -0.64
HNRNPC-210ENST00000554417 ZMYM4Q5VZL5 1548 aa11.07□□□□□ -0.64
HNRNPC-210ENST00000554417 PTPN23Q9H3S7 1636 aa11.06□□□□□ -0.64
HNRNPC-210ENST00000554417 MAP3K13O43283 966 aa11.06□□□□□ -0.64
HNRNPC-210ENST00000554417 PROM2Q8N271 834 aa11.06□□□□□ -0.64
HNRNPC-210ENST00000554417 ZNF644Q9H582 1327 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-210ENST00000554417 COL17A1Q9UMD9 1497 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-210ENST00000554417 SYCP2Q9BX26 1530 aa11.05□□□□□ -0.64
HNRNPC-210ENST00000554417 KDM5CP41229 1560 aa11.05□□□□□ -0.64
HNRNPC-210ENST00000554417 PPARGC1BQ86YN6 1023 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-210ENST00000554417 SHANK2Q9UPX8 1470 aa11.05□□□□□ -0.64
HNRNPC-210ENST00000554417 TRAPPC8Q9Y2L5 1435 aa11.04□□□□□ -0.64
HNRNPC-210ENST00000554417 TTLL13PA6NNM8 815 aa11.04□□□□□ -0.64
HNRNPC-210ENST00000554417 ARHGEF12Q9NZN5 1544 aa11.04□□□□□ -0.64
HNRNPC-210ENST00000554417 ANKRD30AQ9BXX3 1397 aa11.03□□□□□ -0.64
HNRNPC-210ENST00000554417 DAPK1P53355 1430 aa11.02□□□□□ -0.64
HNRNPC-210ENST00000554417 ATP10AO60312 1499 aa11.02□□□□□ -0.65
HNRNPC-210ENST00000554417 RICTORQ6R327 1708 aa11.02□□□□□ -0.65
HNRNPC-210ENST00000554417 SEC24BO95487 1268 aa11.02□□□□□ -0.65
HNRNPC-210ENST00000554417 IER5LQ5T953 404 aa11.02□□□□□ -0.65
HNRNPC-210ENST00000554417 ZFYVE16Q7Z3T8 1539 aa11.02□□□□□ -0.65
HNRNPC-210ENST00000554417 HECW2Q9P2P5 1572 aa11.02□□□□□ -0.65
HNRNPC-210ENST00000554417 MAST1Q9Y2H9 1570 aa11.01□□□□□ -0.65
HNRNPC-210ENST00000554417 ROCK1Q13464 1354 aa11.01□□□□□ -0.65
HNRNPC-210ENST00000554417 ABCC5O15440 1437 aa11.01□□□□□ -0.65
HNRNPC-210ENST00000554417 C9orf84Q5VXU9 1444 aa11.01□□□□□ -0.65
HNRNPC-210ENST00000554417 DNMT1P26358 1616 aaKnown RBP11□□□□□ -0.65
HNRNPC-210ENST00000554417 ATP7AQ04656 1500 aa10.99□□□□□ -0.65
HNRNPC-210ENST00000554417 DHX29Q7Z478 1369 aaKnown RBP10.99□□□□□ -0.65
HNRNPC-210ENST00000554417 FRMPD1Q5SYB0 1578 aa10.99□□□□□ -0.65
HNRNPC-210ENST00000554417 REREQ9P2R6 1566 aa10.99□□□□□ -0.65
HNRNPC-210ENST00000554417 ST18O60284 1047 aa10.98□□□□□ -0.65
HNRNPC-210ENST00000554417 RASEFQ8IZ41 740 aa10.98□□□□□ -0.65
HNRNPC-210ENST00000554417 ARHGEF40Q8TER5 1519 aa10.98□□□□□ -0.65
HNRNPC-210ENST00000554417 NCOA1Q15788 1441 aa10.97□□□□□ -0.65
HNRNPC-210ENST00000554417 ADGRL2O95490 1459 aa10.97□□□□□ -0.65
HNRNPC-210ENST00000554417 INO80Q9ULG1 1556 aaPredicted RBP10.97□□□□□ -0.65
HNRNPC-210ENST00000554417 AGLP35573 1532 aa10.96□□□□□ -0.65
HNRNPC-210ENST00000554417 A2MP01023 1474 aa10.96□□□□□ -0.65
HNRNPC-210ENST00000554417 ARID4BQ4LE39 1312 aaPredicted RBP10.96□□□□□ -0.65
HNRNPC-210ENST00000554417 PLXNC1O60486 1568 aa10.95□□□□□ -0.66
HNRNPC-210ENST00000554417 DUOX2Q9NRD8 1548 aa10.95□□□□□ -0.66
HNRNPC-210ENST00000554417 ERBINQ96RT1 1412 aa10.95□□□□□ -0.66
HNRNPC-210ENST00000554417 SGIP1Q9BQI5 828 aa10.95□□□□□ -0.66
HNRNPC-210ENST00000554417 ESF1Q9H501 851 aaKnown RBP10.95□□□□□ -0.66
HNRNPC-210ENST00000554417 TRIM35Q9UPQ4 493 aa10.95□□□□□ -0.66
HNRNPC-210ENST00000554417 ADGBQ8N7X0 1667 aa10.95□□□□□ -0.66
HNRNPC-210ENST00000554417 YEATS2Q9ULM3 1422 aa10.94□□□□□ -0.66
HNRNPC-210ENST00000554417 KIF15Q9NS87 1388 aa10.94□□□□□ -0.66
HNRNPC-210ENST00000554417 ITGAEP38570 1179 aa10.94□□□□□ -0.66
HNRNPC-210ENST00000554417 TRIM26Q12899 539 aaPredicted RBP10.94□□□□□ -0.66
HNRNPC-210ENST00000554417 SLAIN1Q8ND83 568 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms