RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 ERBINQ96RT1 1412 aa20.4■□□□□ 0.86
PPP4R3A-201ENST00000554308 WASHC2AQ641Q2 1341 aa20.38■□□□□ 0.85
PPP4R3A-201ENST00000554308 KIF3BO15066 747 aa20.37■□□□□ 0.85
PPP4R3A-201ENST00000554308 RTEL1-TNFRSF6BF6WH68 1400 aa20.37■□□□□ 0.85
PPP4R3A-201ENST00000554308 CCDC144AA2RUR9 1427 aa20.37■□□□□ 0.85
PPP4R3A-201ENST00000554308 C11orf95C9JLR9 678 aaPredicted RBP20.36■□□□□ 0.85
PPP4R3A-201ENST00000554308 ZFYVE16Q7Z3T8 1539 aa20.36■□□□□ 0.85
PPP4R3A-201ENST00000554308 ANP32CO43423 234 aa20.35■□□□□ 0.85
PPP4R3A-201ENST00000554308 UNC13BO14795 1591 aa20.34■□□□□ 0.85
PPP4R3A-201ENST00000554308 PLA2R1Q13018 1463 aa20.33■□□□□ 0.84
PPP4R3A-201ENST00000554308 ATP7AQ04656 1500 aa20.32■□□□□ 0.84
PPP4R3A-201ENST00000554308 RAPGEF3O95398 923 aa20.3■□□□□ 0.84
PPP4R3A-201ENST00000554308 CARD11Q9BXL7 1154 aa20.29■□□□□ 0.84
PPP4R3A-201ENST00000554308 IQGAP3Q86VI3 1631 aa20.29■□□□□ 0.84
PPP4R3A-201ENST00000554308 NEFLP07196 543 aa20.29■□□□□ 0.84
PPP4R3A-201ENST00000554308 POLR3GLQ9BT43 218 aa20.28■□□□□ 0.84
PPP4R3A-201ENST00000554308 RBM19Q9Y4C8 960 aaKnown RBP20.28■□□□□ 0.84
PPP4R3A-201ENST00000554308 DHX29Q7Z478 1369 aaKnown RBP20.27■□□□□ 0.84
PPP4R3A-201ENST00000554308 CCER2I3L3R5 266 aa20.27■□□□□ 0.84
PPP4R3A-201ENST00000554308 SPATA31E1Q6ZUB1 1445 aa20.27■□□□□ 0.84
PPP4R3A-201ENST00000554308 MAGI2Q86UL8 1455 aa20.27■□□□□ 0.84
PPP4R3A-201ENST00000554308 ZNF518AQ6AHZ1 1483 aa20.27■□□□□ 0.83
PPP4R3A-201ENST00000554308 USP47Q96K76 1375 aa20.26■□□□□ 0.83
PPP4R3A-201ENST00000554308 INO80Q9ULG1 1556 aaPredicted RBP20.25■□□□□ 0.83
PPP4R3A-201ENST00000554308 CCDC7Q96M83 1385 aa20.24■□□□□ 0.83
PPP4R3A-201ENST00000554308 KANK1Q14678 1352 aa20.24■□□□□ 0.83
PPP4R3A-201ENST00000554308 KIF7Q2M1P5 1343 aa20.23■□□□□ 0.83
PPP4R3A-201ENST00000554308 UHRF1BP1Q6BDS2 1440 aa20.23■□□□□ 0.83
PPP4R3A-201ENST00000554308 FAM69CQ0P6D2 419 aa20.22■□□□□ 0.83
PPP4R3A-201ENST00000554308 GGT6Q6P531 493 aa20.22■□□□□ 0.83
PPP4R3A-201ENST00000554308 RIMBP3CA6NJZ7 1639 aa20.22■□□□□ 0.83
PPP4R3A-201ENST00000554308 RIMBP3BA6NNM3 1639 aa20.22■□□□□ 0.83
PPP4R3A-201ENST00000554308 RIMBP3Q9UFD9 1639 aa20.22■□□□□ 0.83
PPP4R3A-201ENST00000554308 POGZQ7Z3K3 1410 aa20.2■□□□□ 0.82
PPP4R3A-201ENST00000554308 ROCK2O75116 1388 aaKnown RBP20.2■□□□□ 0.82
PPP4R3A-201ENST00000554308 NBPF1Q3BBV0 1214 aa20.2■□□□□ 0.82
PPP4R3A-201ENST00000554308 ST20-MTHFSA0A0A6YYL1 179 aa20.19■□□□□ 0.82
PPP4R3A-201ENST00000554308 KIDINS220Q9ULH0 1771 aa20.19■□□□□ 0.82
PPP4R3A-201ENST00000554308 RALGAPBQ86X10 1494 aa20.17■□□□□ 0.82
PPP4R3A-201ENST00000554308 A2MP01023 1474 aa20.17■□□□□ 0.82
PPP4R3A-201ENST00000554308 CNGB1Q14028 1251 aaPredicted RBP20.17■□□□□ 0.82
PPP4R3A-201ENST00000554308 ATP10AO60312 1499 aa20.17■□□□□ 0.82
PPP4R3A-201ENST00000554308 PRAG1Q86YV5 1406 aa20.15■□□□□ 0.82
PPP4R3A-201ENST00000554308 E9PCH4 1651 aa20.15■□□□□ 0.82
PPP4R3A-201ENST00000554308 IRX6P78412 446 aaPredicted RBP20.14■□□□□ 0.82
PPP4R3A-201ENST00000554308 CFAP74Q9C0B2 1584 aa20.14■□□□□ 0.81
PPP4R3A-201ENST00000554308 CNTLNQ9NXG0 1405 aa20.13■□□□□ 0.81
PPP4R3A-201ENST00000554308 NEO1Q92859 1461 aa20.13■□□□□ 0.81
PPP4R3A-201ENST00000554308 DEPDC5O75140 1603 aa20.12■□□□□ 0.81
PPP4R3A-201ENST00000554308 MLH3Q9UHC1 1453 aa20.12■□□□□ 0.81
PPP4R3A-201ENST00000554308 KDM5CP41229 1560 aa20.11■□□□□ 0.81
PPP4R3A-201ENST00000554308 MSH5O43196 834 aa20.1■□□□□ 0.81
PPP4R3A-201ENST00000554308 HNRNPUQ00839 825 aaKnown RBP eCLIP20.1■□□□□ 0.81
PPP4R3A-201ENST00000554308 WASHC2CQ9Y4E1 1318 aa20.1■□□□□ 0.81
PPP4R3A-201ENST00000554308 BCL11AQ9H165 835 aa20.09■□□□□ 0.81
PPP4R3A-201ENST00000554308 PTPRTO14522 1441 aa20.09■□□□□ 0.81
PPP4R3A-201ENST00000554308 MROH1Q8NDA8 1641 aa20.08■□□□□ 0.8
PPP4R3A-201ENST00000554308 HECW2Q9P2P5 1572 aa20.08■□□□□ 0.8
PPP4R3A-201ENST00000554308 PRDM15P57071 1507 aaPredicted RBP20.08■□□□□ 0.8
PPP4R3A-201ENST00000554308 BCORL1Q5H9F3 1711 aa20.08■□□□□ 0.8
PPP4R3A-201ENST00000554308 VWDEQ8N2E2 1590 aa20.07■□□□□ 0.8
PPP4R3A-201ENST00000554308 TET3O43151 1660 aa20.07■□□□□ 0.8
PPP4R3A-201ENST00000554308 EIF2AK4Q9P2K8 1649 aaKnown RBP20.07■□□□□ 0.8
PPP4R3A-201ENST00000554308 CHGAP10645 457 aaKnown RBP20.06■□□□□ 0.8
PPP4R3A-201ENST00000554308 TRPM2O94759 1503 aa20.06■□□□□ 0.8
PPP4R3A-201ENST00000554308 PRKRIP1Q9H875 184 aaPredicted RBP20.06■□□□□ 0.8
PPP4R3A-201ENST00000554308 MAP3K4Q9Y6R4 1608 aa20.04■□□□□ 0.8
PPP4R3A-201ENST00000554308 FRMPD1Q5SYB0 1578 aa20.04■□□□□ 0.8
PPP4R3A-201ENST00000554308 UGGT1Q9NYU2 1555 aa20.04■□□□□ 0.8
PPP4R3A-201ENST00000554308 YEATS2Q9ULM3 1422 aa20.03■□□□□ 0.8
PPP4R3A-201ENST00000554308 CCDC184Q52MB2 194 aa20.03■□□□□ 0.8
PPP4R3A-201ENST00000554308 SPHKAPQ2M3C7 1700 aa20.03■□□□□ 0.8
PPP4R3A-201ENST00000554308 ABCA6Q8N139 1617 aa20.03■□□□□ 0.8
PPP4R3A-201ENST00000554308 CLTCL1P53675 1640 aa20.02■□□□□ 0.8
PPP4R3A-201ENST00000554308 TRPM1Q7Z4N2 1603 aa20.02■□□□□ 0.8
PPP4R3A-201ENST00000554308 ARID4BQ4LE39 1312 aaPredicted RBP20■□□□□ 0.79
PPP4R3A-201ENST00000554308 EFCAB6Q5THR3 1501 aa19.99■□□□□ 0.79
PPP4R3A-201ENST00000554308 GLI2P10070 1586 aa19.99■□□□□ 0.79
PPP4R3A-201ENST00000554308 TSPOAP1O95153 1857 aa19.99■□□□□ 0.79
PPP4R3A-201ENST00000554308 GPRASP1Q5JY77 1395 aa19.99■□□□□ 0.79
PPP4R3A-201ENST00000554308 CFAP65Q6ZU64 1925 aaKnown RBP19.99■□□□□ 0.79
PPP4R3A-201ENST00000554308 DIP2BQ9P265 1576 aa19.98■□□□□ 0.79
PPP4R3A-201ENST00000554308 PPRC1Q5VV67 1664 aaKnown RBP19.98■□□□□ 0.79
PPP4R3A-201ENST00000554308 NPATQ14207 1427 aa19.98■□□□□ 0.79
PPP4R3A-201ENST00000554308 CEP152O94986 1710 aa19.98■□□□□ 0.79
PPP4R3A-201ENST00000554308 MRS2Q9HD23 443 aa19.96■□□□□ 0.79
PPP4R3A-201ENST00000554308 POLR1AO95602 1720 aaPredicted RBP19.96■□□□□ 0.79
PPP4R3A-201ENST00000554308 RICTORQ6R327 1708 aa19.95■□□□□ 0.78
PPP4R3A-201ENST00000554308 RNF17Q9BXT8 1623 aaKnown RBP19.95■□□□□ 0.78
PPP4R3A-201ENST00000554308 DIP2CQ9Y2E4 1556 aa19.95■□□□□ 0.78
PPP4R3A-201ENST00000554308 ADGRF5Q8IZF2 1346 aa19.95■□□□□ 0.78
PPP4R3A-201ENST00000554308 TESK2Q96S53 571 aa19.95■□□□□ 0.78
PPP4R3A-201ENST00000554308 FAM9BQ8IZU0 186 aa19.95■□□□□ 0.78
PPP4R3A-201ENST00000554308 CFAP70Q5T0N1 1121 aa19.94■□□□□ 0.78
PPP4R3A-201ENST00000554308 LMTK2Q8IWU2 1503 aa19.94■□□□□ 0.78
PPP4R3A-201ENST00000554308 STAC3Q96MF2 364 aa19.94■□□□□ 0.78
PPP4R3A-201ENST00000554308 DISP3Q9P2K9 1392 aa19.91■□□□□ 0.78
PPP4R3A-201ENST00000554308 ABCC3O15438 1527 aa19.91■□□□□ 0.78
PPP4R3A-201ENST00000554308 NUTM2DQ5VT03 806 aaPredicted RBP19.91■□□□□ 0.78
PPP4R3A-201ENST00000554308 TMF1P82094 1093 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms