RNA–Protein interactions for RNA: ENST00000554186.1

LINC00520-201, long intergenic non-protein coding RNA 520, humanhuman

TSL 5 BASIC

Gene LINC00520, Length 831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-201ENST00000554186 RABGEF1Q9UJ41 708 aa10.67□□□□□ -0.7
LINC00520-201ENST00000554186 PHF14O94880 888 aa10.66□□□□□ -0.7
LINC00520-201ENST00000554186 DPYSL4O14531 572 aa10.65□□□□□ -0.7
LINC00520-201ENST00000554186 CAMK2BQ13554 666 aa10.65□□□□□ -0.7
LINC00520-201ENST00000554186 RGS20O76081 388 aa10.64□□□□□ -0.71
LINC00520-201ENST00000554186 KIAA1468Q9P260 1216 aa10.63□□□□□ -0.71
LINC00520-201ENST00000554186 ANKK1Q8NFD2 765 aa10.62□□□□□ -0.71
LINC00520-201ENST00000554186 FBXW7Q969H0 707 aa10.62□□□□□ -0.71
LINC00520-201ENST00000554186 C6orf132Q5T0Z8 1188 aa10.61□□□□□ -0.71
LINC00520-201ENST00000554186 SEPT9Q9UHD8 586 aaPredicted RBP10.61□□□□□ -0.71
LINC00520-201ENST00000554186 RBM33Q96EV2 1170 aaKnown RBP10.6□□□□□ -0.71
LINC00520-201ENST00000554186 SOWAHBA6NEL2 793 aa10.58□□□□□ -0.72
LINC00520-201ENST00000554186 DDX12PQ92771 950 aa10.58□□□□□ -0.72
LINC00520-201ENST00000554186 ZFRQ96KR1 1074 aaKnown RBP10.58□□□□□ -0.72
LINC00520-201ENST00000554186 ITGBL1O95965 494 aaPredicted RBP10.57□□□□□ -0.72
LINC00520-201ENST00000554186 WBP1LQ9NX94 342 aa10.57□□□□□ -0.72
LINC00520-201ENST00000554186 LAPTM4BQ86VI4 370 aa10.56□□□□□ -0.72
LINC00520-201ENST00000554186 TRIM6-TRIM34B2RNG4 842 aa10.55□□□□□ -0.72
LINC00520-201ENST00000554186 EPAS1Q99814 870 aa10.55□□□□□ -0.72
LINC00520-201ENST00000554186 TSR1Q2NL82 804 aaKnown RBP10.53□□□□□ -0.72
LINC00520-201ENST00000554186 Q6ZNB5 142 aa10.52□□□□□ -0.73
LINC00520-201ENST00000554186 ONECUT3O60422 494 aaPredicted RBP10.51□□□□□ -0.73
LINC00520-201ENST00000554186 PRIM1P49642 420 aaKnown RBP10.51□□□□□ -0.73
LINC00520-201ENST00000554186 TSKSQ9UJT2 592 aa10.51□□□□□ -0.73
LINC00520-201ENST00000554186 NBR1Q14596 966 aa10.49□□□□□ -0.73
LINC00520-201ENST00000554186 FAM98CQ17RN3 349 aaKnown RBP10.49□□□□□ -0.73
LINC00520-201ENST00000554186 EN1Q05925 392 aaPredicted RBP10.48□□□□□ -0.73
LINC00520-201ENST00000554186 C3orf80F5H4A9 247 aa10.47□□□□□ -0.73
LINC00520-201ENST00000554186 PDIA6Q15084 440 aa10.47□□□□□ -0.73
LINC00520-201ENST00000554186 FAM198AQ9UFP1 575 aa10.47□□□□□ -0.73
LINC00520-201ENST00000554186 HPS5Q9UPZ3 1129 aa10.47□□□□□ -0.73
LINC00520-201ENST00000554186 MAP3K7O43318 606 aa10.46□□□□□ -0.73
LINC00520-201ENST00000554186 SMAPO00193 183 aa10.45□□□□□ -0.74
LINC00520-201ENST00000554186 BBXQ8WY36 941 aaPredicted RBP10.45□□□□□ -0.74
LINC00520-201ENST00000554186 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.45□□□□□ -0.74
LINC00520-201ENST00000554186 NYAP1Q6ZVC0 841 aa10.44□□□□□ -0.74
LINC00520-201ENST00000554186 LRCH3Q96II8 777 aa10.44□□□□□ -0.74
LINC00520-201ENST00000554186 TSR3Q9UJK0 312 aaKnown RBP10.44□□□□□ -0.74
LINC00520-201ENST00000554186 KCNC4Q03721 635 aa10.43□□□□□ -0.74
LINC00520-201ENST00000554186 CDCA7LQ96GN5 454 aa10.4□□□□□ -0.74
LINC00520-201ENST00000554186 LCE2BO14633 110 aa10.39□□□□□ -0.75
LINC00520-201ENST00000554186 SAMD7Q7Z3H4 446 aa10.39□□□□□ -0.75
LINC00520-201ENST00000554186 PACS2Q86VP3 889 aa10.39□□□□□ -0.75
LINC00520-201ENST00000554186 CDHR5Q9HBB8 845 aa10.38□□□□□ -0.75
LINC00520-201ENST00000554186 PRSS12P56730 875 aa10.37□□□□□ -0.75
LINC00520-201ENST00000554186 GRXCR2A6NFK2 248 aa10.36□□□□□ -0.75
LINC00520-201ENST00000554186 SPDYE16A6NNV3 312 aaPredicted RBP10.36□□□□□ -0.75
LINC00520-201ENST00000554186 TJAP1Q5JTD0 557 aa10.36□□□□□ -0.75
LINC00520-201ENST00000554186 E2F4Q16254 413 aa10.35□□□□□ -0.75
LINC00520-201ENST00000554186 PPP4CP60510 307 aa10.34□□□□□ -0.75
LINC00520-201ENST00000554186 SPRYD3Q8NCJ5 442 aa10.34□□□□□ -0.75
LINC00520-201ENST00000554186 OSBPP22059 807 aa10.33□□□□□ -0.76
LINC00520-201ENST00000554186 TATDN2Q93075 761 aa10.32□□□□□ -0.76
LINC00520-201ENST00000554186 LOC100996750A0A140TA64 210 aa10.31□□□□□ -0.76
LINC00520-201ENST00000554186 MTRQ99707 1265 aa10.31□□□□□ -0.76
LINC00520-201ENST00000554186 KRTAP4-6Q9BYQ5 205 aa10.31□□□□□ -0.76
LINC00520-201ENST00000554186 PNMA3Q9UL41 463 aa10.31□□□□□ -0.76
LINC00520-201ENST00000554186 ARIH1Q9Y4X5 557 aaPredicted RBP10.31□□□□□ -0.76
LINC00520-201ENST00000554186 NUDT18Q6ZVK8 323 aa10.29□□□□□ -0.76
LINC00520-201ENST00000554186 ZNF516Q92618 1163 aa10.29□□□□□ -0.76
LINC00520-201ENST00000554186 APLP1P51693 650 aa10.28□□□□□ -0.76
LINC00520-201ENST00000554186 NBPF26B4DH59 902 aa10.27□□□□□ -0.77
LINC00520-201ENST00000554186 CFAP44Q96MT7 982 aa10.27□□□□□ -0.77
LINC00520-201ENST00000554186 PAXIP1Q6ZW49 1069 aaPredicted RBP10.26□□□□□ -0.77
LINC00520-201ENST00000554186 CERKQ8TCT0 537 aa10.26□□□□□ -0.77
LINC00520-201ENST00000554186 NPDC1Q9NQX5 325 aaPredicted RBP10.26□□□□□ -0.77
LINC00520-201ENST00000554186 RNF40O75150 1001 aa10.25□□□□□ -0.77
LINC00520-201ENST00000554186 PPP1R18Q6NYC8 613 aa10.25□□□□□ -0.77
LINC00520-201ENST00000554186 PRKD2Q9BZL6 878 aa10.25□□□□□ -0.77
LINC00520-201ENST00000554186 TTC13Q8NBP0 860 aa10.24□□□□□ -0.77
LINC00520-201ENST00000554186 NKX2-3Q8TAU0 364 aa10.24□□□□□ -0.77
LINC00520-201ENST00000554186 IL21Q9HBE4 155 aa10.24□□□□□ -0.77
LINC00520-201ENST00000554186 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.24□□□□□ -0.77
LINC00520-201ENST00000554186 GFRA3O60609 400 aa10.23□□□□□ -0.77
LINC00520-201ENST00000554186 PADI6Q6TGC4 694 aa10.23□□□□□ -0.77
LINC00520-201ENST00000554186 TRAF7Q6Q0C0 670 aa10.22□□□□□ -0.77
LINC00520-201ENST00000554186 WDR70Q9NW82 654 aa10.22□□□□□ -0.77
LINC00520-201ENST00000554186 SWT1Q5T5J6 900 aaKnown RBP10.21□□□□□ -0.77
LINC00520-201ENST00000554186 RBM27Q9P2N5 1060 aaKnown RBP10.21□□□□□ -0.77
LINC00520-201ENST00000554186 COPS2P61201 443 aa10.18□□□□□ -0.78
LINC00520-201ENST00000554186 RTN4Q9NQC3 1192 aaKnown RBP10.17□□□□□ -0.78
LINC00520-201ENST00000554186 MLLT3P42568 568 aaPredicted RBP10.16□□□□□ -0.78
LINC00520-201ENST00000554186 LAPTM4AQ15012 233 aa10.16□□□□□ -0.78
LINC00520-201ENST00000554186 ZNF775Q96BV0 537 aaPredicted RBP10.16□□□□□ -0.78
LINC00520-201ENST00000554186 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.16□□□□□ -0.78
LINC00520-201ENST00000554186 EYA1Q99502 592 aa10.15□□□□□ -0.78
LINC00520-201ENST00000554186 NRG2O14511 850 aaPredicted RBP10.13□□□□□ -0.79
LINC00520-201ENST00000554186 V9GY48 417 aaPredicted RBP10.13□□□□□ -0.79
LINC00520-201ENST00000554186 HDGFP51858 240 aaKnown RBP10.12□□□□□ -0.79
LINC00520-201ENST00000554186 SLF2Q8IX21 1173 aa10.11□□□□□ -0.79
LINC00520-201ENST00000554186 EMID1Q96A84 441 aaPredicted RBP10.1□□□□□ -0.79
LINC00520-201ENST00000554186 NISCHQ9Y2I1 1504 aa10.09□□□□□ -0.79
LINC00520-201ENST00000554186 ZPR1O75312 459 aa10.08□□□□□ -0.8
LINC00520-201ENST00000554186 AMER1Q5JTC6 1135 aaPredicted RBP10.08□□□□□ -0.8
LINC00520-201ENST00000554186 TLL1O43897 1013 aa10.07□□□□□ -0.8
LINC00520-201ENST00000554186 FAM161AQ3B820 660 aa10.07□□□□□ -0.8
LINC00520-201ENST00000554186 ZNF787Q6DD87 383 aa10.07□□□□□ -0.8
LINC00520-201ENST00000554186 BLOC1S3Q6QNY0 202 aa10.07□□□□□ -0.8
LINC00520-201ENST00000554186 KCNV2Q8TDN2 545 aa10.07□□□□□ -0.8
LINC00520-201ENST00000554186 TSHZ2Q9NRE2 1034 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms