RNA–Protein interactions for RNA: ENST00000554174.1

LRP1-207, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-207ENST00000554174 EFCAB2Q5VUJ9 269 aa16.85■□□□□ 0.29
LRP1-207ENST00000554174 MRS2Q9HD23 443 aa16.85■□□□□ 0.29
LRP1-207ENST00000554174 TRAPPC8Q9Y2L5 1435 aa16.85■□□□□ 0.29
LRP1-207ENST00000554174 CCDC144AA2RUR9 1427 aa16.85■□□□□ 0.29
LRP1-207ENST00000554174 ABCC1P33527 1531 aa16.85■□□□□ 0.29
LRP1-207ENST00000554174 IQGAP3Q86VI3 1631 aa16.84■□□□□ 0.29
LRP1-207ENST00000554174 FAM9BQ8IZU0 186 aa16.84■□□□□ 0.29
LRP1-207ENST00000554174 DUOX2Q9NRD8 1548 aa16.84■□□□□ 0.29
LRP1-207ENST00000554174 CNGB1Q14028 1251 aaPredicted RBP16.84■□□□□ 0.29
LRP1-207ENST00000554174 RGL3Q3MIN7 710 aa16.84■□□□□ 0.29
LRP1-207ENST00000554174 ST20-MTHFSA0A0A6YYL1 179 aa16.83■□□□□ 0.28
LRP1-207ENST00000554174 PRAG1Q86YV5 1406 aa16.81■□□□□ 0.28
LRP1-207ENST00000554174 ERBINQ96RT1 1412 aa16.81■□□□□ 0.28
LRP1-207ENST00000554174 MAGI2Q86UL8 1455 aa16.8■□□□□ 0.28
LRP1-207ENST00000554174 ROCK2O75116 1388 aaKnown RBP16.8■□□□□ 0.28
LRP1-207ENST00000554174 NEFLP07196 543 aa16.8■□□□□ 0.28
LRP1-207ENST00000554174 ARID4BQ4LE39 1312 aaPredicted RBP16.8■□□□□ 0.28
LRP1-207ENST00000554174 AFAP1Q8N556 730 aa16.79■□□□□ 0.28
LRP1-207ENST00000554174 TRPM1Q7Z4N2 1603 aa16.79■□□□□ 0.28
LRP1-207ENST00000554174 A2MP01023 1474 aa16.79■□□□□ 0.28
LRP1-207ENST00000554174 NBPF1Q3BBV0 1214 aa16.78■□□□□ 0.28
LRP1-207ENST00000554174 TSHZ2Q9NRE2 1034 aa16.75■□□□□ 0.27
LRP1-207ENST00000554174 SPAG9O60271 1321 aaKnown RBP16.75■□□□□ 0.27
LRP1-207ENST00000554174 WDR7Q9Y4E6 1490 aa16.75■□□□□ 0.27
LRP1-207ENST00000554174 ATP10AO60312 1499 aa16.74■□□□□ 0.27
LRP1-207ENST00000554174 ZFYVE16Q7Z3T8 1539 aa16.74■□□□□ 0.27
LRP1-207ENST00000554174 ARAP3Q8WWN8 1544 aa16.74■□□□□ 0.27
LRP1-207ENST00000554174 IRX6P78412 446 aaPredicted RBP16.72■□□□□ 0.27
LRP1-207ENST00000554174 ZBED9Q6R2W3 1325 aa16.71■□□□□ 0.27
LRP1-207ENST00000554174 RTEL1-TNFRSF6BF6WH68 1400 aa16.71■□□□□ 0.27
LRP1-207ENST00000554174 FANCAO15360 1455 aa16.71■□□□□ 0.27
LRP1-207ENST00000554174 GPRASP1Q5JY77 1395 aa16.7■□□□□ 0.26
LRP1-207ENST00000554174 E9PCH4 1651 aa16.7■□□□□ 0.26
LRP1-207ENST00000554174 ABCA9Q8IUA7 1624 aa16.7■□□□□ 0.26
LRP1-207ENST00000554174 PRDM15P57071 1507 aaPredicted RBP16.67■□□□□ 0.26
LRP1-207ENST00000554174 ASXL2Q76L83 1435 aa16.67■□□□□ 0.26
LRP1-207ENST00000554174 INO80Q9ULG1 1556 aaPredicted RBP16.66■□□□□ 0.26
LRP1-207ENST00000554174 ATP7AQ04656 1500 aa16.66■□□□□ 0.26
LRP1-207ENST00000554174 LAMC1P11047 1609 aa16.65■□□□□ 0.26
LRP1-207ENST00000554174 TESK2Q96S53 571 aa16.65■□□□□ 0.26
LRP1-207ENST00000554174 DEPDC5O75140 1603 aa16.65■□□□□ 0.26
LRP1-207ENST00000554174 DISP3Q9P2K9 1392 aa16.64■□□□□ 0.26
LRP1-207ENST00000554174 SENP3-EIF4A1A0A087X0R7 540 aa16.64■□□□□ 0.25
LRP1-207ENST00000554174 PNISRQ8TF01 805 aaKnown RBP16.64■□□□□ 0.25
LRP1-207ENST00000554174 SCAPERQ9BY12 1400 aa16.64■□□□□ 0.25
LRP1-207ENST00000554174 EIF2AK4Q9P2K8 1649 aaKnown RBP16.64■□□□□ 0.25
LRP1-207ENST00000554174 ADGRL1O94910 1474 aa16.64■□□□□ 0.25
LRP1-207ENST00000554174 COL17A1Q9UMD9 1497 aaPredicted RBP16.62■□□□□ 0.25
LRP1-207ENST00000554174 TRPM2O94759 1503 aa16.62■□□□□ 0.25
LRP1-207ENST00000554174 TMC1Q8TDI8 760 aa16.62■□□□□ 0.25
LRP1-207ENST00000554174 SPHKAPQ2M3C7 1700 aa16.62■□□□□ 0.25
LRP1-207ENST00000554174 CLTCL1P53675 1640 aa16.61■□□□□ 0.25
LRP1-207ENST00000554174 KIF3BO15066 747 aa16.61■□□□□ 0.25
LRP1-207ENST00000554174 MYT1LQ9UL68 1186 aa16.61■□□□□ 0.25
LRP1-207ENST00000554174 PTPRTO14522 1441 aa16.61■□□□□ 0.25
LRP1-207ENST00000554174 RNF17Q9BXT8 1623 aaKnown RBP16.6■□□□□ 0.25
LRP1-207ENST00000554174 PER1O15534 1290 aaPredicted RBP16.6■□□□□ 0.25
LRP1-207ENST00000554174 VWDEQ8N2E2 1590 aa16.6■□□□□ 0.25
LRP1-207ENST00000554174 TET3O43151 1660 aa16.6■□□□□ 0.25
LRP1-207ENST00000554174 MYBBP1AQ9BQG0 1328 aaKnown RBP16.6■□□□□ 0.25
LRP1-207ENST00000554174 MADDQ8WXG6 1647 aa16.59■□□□□ 0.25
LRP1-207ENST00000554174 CEP152O94986 1710 aa16.59■□□□□ 0.25
LRP1-207ENST00000554174 RALBP1Q15311 655 aa16.58■□□□□ 0.25
LRP1-207ENST00000554174 MROH1Q8NDA8 1641 aa16.58■□□□□ 0.24
LRP1-207ENST00000554174 OSCARQ8IYS5 282 aa16.57■□□□□ 0.24
LRP1-207ENST00000554174 BRD4O60885 1362 aaPredicted RBP16.57■□□□□ 0.24
LRP1-207ENST00000554174 KTN1Q86UP2 1357 aaKnown RBP16.57■□□□□ 0.24
LRP1-207ENST00000554174 LRPPRCP42704 1394 aaKnown RBP16.56■□□□□ 0.24
LRP1-207ENST00000554174 PARD3Q8TEW0 1356 aa16.56■□□□□ 0.24
LRP1-207ENST00000554174 KIDINS220Q9ULH0 1771 aa16.56■□□□□ 0.24
LRP1-207ENST00000554174 KANK1Q14678 1352 aa16.55■□□□□ 0.24
LRP1-207ENST00000554174 SMG6Q86US8 1419 aaKnown RBP16.55■□□□□ 0.24
LRP1-207ENST00000554174 TMF1P82094 1093 aa16.54■□□□□ 0.24
LRP1-207ENST00000554174 PANK3Q9H999 370 aa16.54■□□□□ 0.24
LRP1-207ENST00000554174 UGGT1Q9NYU2 1555 aa16.54■□□□□ 0.24
LRP1-207ENST00000554174 IQGAP1P46940 1657 aa16.53■□□□□ 0.24
LRP1-207ENST00000554174 CC2D1BQ5T0F9 858 aaKnown RBP16.52■□□□□ 0.24
LRP1-207ENST00000554174 NPM1P06748 294 aaKnown RBP eCLIP16.51■□□□□ 0.23
LRP1-207ENST00000554174 NUDCQ9Y266 331 aa16.51■□□□□ 0.23
LRP1-207ENST00000554174 NLRP13Q86W25 1043 aa16.51■□□□□ 0.23
LRP1-207ENST00000554174 ZNF518AQ6AHZ1 1483 aa16.5■□□□□ 0.23
LRP1-207ENST00000554174 ERICH6BQ5W0A0 696 aa16.5■□□□□ 0.23
LRP1-207ENST00000554174 PPP4R2Q9NY27 417 aa16.5■□□□□ 0.23
LRP1-207ENST00000554174 CD109Q6YHK3 1445 aa16.49■□□□□ 0.23
LRP1-207ENST00000554174 PPRC1Q5VV67 1664 aaKnown RBP16.48■□□□□ 0.23
LRP1-207ENST00000554174 EFCAB6Q5THR3 1501 aa16.48■□□□□ 0.23
LRP1-207ENST00000554174 SCAF11Q99590 1463 aaKnown RBP16.47■□□□□ 0.23
LRP1-207ENST00000554174 STAC3Q96MF2 364 aa16.47■□□□□ 0.23
LRP1-207ENST00000554174 RBM19Q9Y4C8 960 aaKnown RBP16.47■□□□□ 0.23
LRP1-207ENST00000554174 WASHC2CQ9Y4E1 1318 aa16.47■□□□□ 0.23
LRP1-207ENST00000554174 POGZQ7Z3K3 1410 aa16.46■□□□□ 0.23
LRP1-207ENST00000554174 B4GALNT3Q6L9W6 998 aa16.45■□□□□ 0.22
LRP1-207ENST00000554174 ADGRF5Q8IZF2 1346 aa16.45■□□□□ 0.22
LRP1-207ENST00000554174 CFAP70Q5T0N1 1121 aa16.45■□□□□ 0.22
LRP1-207ENST00000554174 FRMPD1Q5SYB0 1578 aa16.45■□□□□ 0.22
LRP1-207ENST00000554174 MROH2AA6NES4 1674 aa16.44■□□□□ 0.22
LRP1-207ENST00000554174 RNF123Q5XPI4 1314 aa16.44■□□□□ 0.22
LRP1-207ENST00000554174 NEURL4Q96JN8 1562 aa16.44■□□□□ 0.22
LRP1-207ENST00000554174 KIF1BO60333 1816 aa16.44■□□□□ 0.22
LRP1-207ENST00000554174 SALL2Q9Y467 1007 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms