RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 PRDM15P57071 1507 aaPredicted RBP15.97■□□□□ 0.15
PABPN1-203ENST00000553960 ANKRD30BQ9BXX2 1392 aa15.96■□□□□ 0.15
PABPN1-203ENST00000553960 LMTK2Q8IWU2 1503 aa15.95■□□□□ 0.14
PABPN1-203ENST00000553960 A2MP01023 1474 aa15.95■□□□□ 0.14
PABPN1-203ENST00000553960 AGLP35573 1532 aa15.94■□□□□ 0.14
PABPN1-203ENST00000553960 DIP2CQ9Y2E4 1556 aa15.93■□□□□ 0.14
PABPN1-203ENST00000553960 NUP155O75694 1391 aa15.92■□□□□ 0.14
PABPN1-203ENST00000553960 ABCA6Q8N139 1617 aa15.92■□□□□ 0.14
PABPN1-203ENST00000553960 MROH1Q8NDA8 1641 aa15.92■□□□□ 0.14
PABPN1-203ENST00000553960 PPP6R1Q9UPN7 881 aa15.91■□□□□ 0.14
PABPN1-203ENST00000553960 RPRD2Q5VT52 1461 aaKnown RBP15.9■□□□□ 0.14
PABPN1-203ENST00000553960 SLC4A1APQ9BWU0 796 aaKnown RBP15.89■□□□□ 0.13
PABPN1-203ENST00000553960 TET3O43151 1660 aa15.89■□□□□ 0.13
PABPN1-203ENST00000553960 TSPOAP1O95153 1857 aa15.88■□□□□ 0.13
PABPN1-203ENST00000553960 TRIM52Q96A61 297 aa15.88■□□□□ 0.13
PABPN1-203ENST00000553960 NEURL4Q96JN8 1562 aa15.87■□□□□ 0.13
PABPN1-203ENST00000553960 COL17A1Q9UMD9 1497 aaPredicted RBP15.87■□□□□ 0.13
PABPN1-203ENST00000553960 ARHGEF40Q8TER5 1519 aa15.86■□□□□ 0.13
PABPN1-203ENST00000553960 RAPGEF3O95398 923 aa15.86■□□□□ 0.13
PABPN1-203ENST00000553960 PTPRTO14522 1441 aa15.85■□□□□ 0.13
PABPN1-203ENST00000553960 ZC3H13Q5T200 1668 aaKnown RBP15.85■□□□□ 0.13
PABPN1-203ENST00000553960 KANK1Q14678 1352 aa15.85■□□□□ 0.13
PABPN1-203ENST00000553960 ARHGAP31Q2M1Z3 1444 aa15.84■□□□□ 0.13
PABPN1-203ENST00000553960 PKD2Q13563 968 aa15.82■□□□□ 0.12
PABPN1-203ENST00000553960 YEATS2Q9ULM3 1422 aa15.82■□□□□ 0.12
PABPN1-203ENST00000553960 EFCAB6Q5THR3 1501 aa15.81■□□□□ 0.12
PABPN1-203ENST00000553960 PLA2R1Q13018 1463 aa15.8■□□□□ 0.12
PABPN1-203ENST00000553960 STAC3Q96MF2 364 aa15.79■□□□□ 0.12
PABPN1-203ENST00000553960 E9PCH4 1651 aa15.79■□□□□ 0.12
PABPN1-203ENST00000553960 TRPM2O94759 1503 aa15.78■□□□□ 0.12
PABPN1-203ENST00000553960 KIF3BO15066 747 aa15.78■□□□□ 0.12
PABPN1-203ENST00000553960 PPP1R15AO75807 674 aaPredicted RBP15.78■□□□□ 0.12
PABPN1-203ENST00000553960 ABCC3O15438 1527 aa15.77■□□□□ 0.11
PABPN1-203ENST00000553960 SIN3AQ96ST3 1273 aa15.75■□□□□ 0.11
PABPN1-203ENST00000553960 TONSLQ96HA7 1378 aa15.75■□□□□ 0.11
PABPN1-203ENST00000553960 SPHKAPQ2M3C7 1700 aa15.74■□□□□ 0.11
PABPN1-203ENST00000553960 UHRF1BP1Q6BDS2 1440 aa15.73■□□□□ 0.11
PABPN1-203ENST00000553960 NOS1P29475 1434 aa15.72■□□□□ 0.11
PABPN1-203ENST00000553960 CNTLNQ9NXG0 1405 aa15.72■□□□□ 0.11
PABPN1-203ENST00000553960 CCDC144AA2RUR9 1427 aa15.71■□□□□ 0.11
PABPN1-203ENST00000553960 CAMSAP1Q5T5Y3 1602 aa15.71■□□□□ 0.11
PABPN1-203ENST00000553960 SPATA31E1Q6ZUB1 1445 aa15.7■□□□□ 0.1
PABPN1-203ENST00000553960 NPATQ14207 1427 aa15.69■□□□□ 0.1
PABPN1-203ENST00000553960 CEP152O94986 1710 aa15.69■□□□□ 0.1
PABPN1-203ENST00000553960 MYT1LQ9UL68 1186 aa15.69■□□□□ 0.1
PABPN1-203ENST00000553960 PIK3C2BO00750 1634 aa15.67■□□□□ 0.1
PABPN1-203ENST00000553960 SIGLEC1Q9BZZ2 1709 aa15.66■□□□□ 0.1
PABPN1-203ENST00000553960 FOXD1Q16676 465 aa15.66■□□□□ 0.1
PABPN1-203ENST00000553960 L3MBTL2Q969R5 705 aa15.66■□□□□ 0.1
PABPN1-203ENST00000553960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.66■□□□□ 0.11e-12■□□□□ 10.7
PABPN1-203ENST00000553960 MROH2AA6NES4 1674 aa15.66■□□□□ 0.1
PABPN1-203ENST00000553960 WASHC2CQ9Y4E1 1318 aa15.65■□□□□ 0.1
PABPN1-203ENST00000553960 NEUROD1Q13562 356 aa15.64■□□□□ 0.09
PABPN1-203ENST00000553960 CLTCL1P53675 1640 aa15.62■□□□□ 0.09
PABPN1-203ENST00000553960 TRHP20396 242 aaPredicted RBP15.62■□□□□ 0.09
PABPN1-203ENST00000553960 SLC52A1Q9NWF4 448 aa15.62■□□□□ 0.09
PABPN1-203ENST00000553960 SPATA31D1Q6ZQQ2 1576 aa15.62■□□□□ 0.09
PABPN1-203ENST00000553960 KIF1BO60333 1816 aa15.6■□□□□ 0.09
PABPN1-203ENST00000553960 GGT6Q6P531 493 aa15.6■□□□□ 0.09
PABPN1-203ENST00000553960 KDM5AP29375 1690 aaKnown RBP15.6■□□□□ 0.09
PABPN1-203ENST00000553960 PREX1Q8TCU6 1659 aa15.6■□□□□ 0.09
PABPN1-203ENST00000553960 ADGRB3O60242 1522 aa15.59■□□□□ 0.09
PABPN1-203ENST00000553960 RPGRIP1LQ68CZ1 1315 aa15.58■□□□□ 0.08
PABPN1-203ENST00000553960 GPRASP1Q5JY77 1395 aa15.58■□□□□ 0.08
PABPN1-203ENST00000553960 MYOM2P54296 1465 aa15.58■□□□□ 0.08
PABPN1-203ENST00000553960 RALGAPBQ86X10 1494 aa15.58■□□□□ 0.08
PABPN1-203ENST00000553960 NRXN1Q9ULB1 1477 aa15.58■□□□□ 0.08
PABPN1-203ENST00000553960 SYNMO15061 1565 aa15.58■□□□□ 0.08
PABPN1-203ENST00000553960 LAMC1P11047 1609 aa15.57■□□□□ 0.08
PABPN1-203ENST00000553960 ZFYVE9O95405 1425 aa15.57■□□□□ 0.08
PABPN1-203ENST00000553960 ERVK-7P63135 1459 aa15.57■□□□□ 0.08
PABPN1-203ENST00000553960 KIAA1210Q9ULL0 1709 aa15.57■□□□□ 0.08
PABPN1-203ENST00000553960 ZNF316A6NFI3 1004 aaPredicted RBP15.56■□□□□ 0.08
PABPN1-203ENST00000553960 PRAG1Q86YV5 1406 aa15.56■□□□□ 0.08
PABPN1-203ENST00000553960 IFT172Q9UG01 1749 aa15.56■□□□□ 0.08
PABPN1-203ENST00000553960 AEBP2Q6ZN18 517 aaPredicted RBP15.55■□□□□ 0.08
PABPN1-203ENST00000553960 CLTCQ00610 1675 aaKnown RBP15.54■□□□□ 0.08
PABPN1-203ENST00000553960 ZMYM3Q14202 1370 aa15.51■□□□□ 0.07
PABPN1-203ENST00000553960 TRPM1Q7Z4N2 1603 aa15.51■□□□□ 0.07
PABPN1-203ENST00000553960 NBPF8Q3BBV2 869 aa15.51■□□□□ 0.07
PABPN1-203ENST00000553960 TMEM131LA2VDJ0 1609 aa15.5■□□□□ 0.07
PABPN1-203ENST00000553960 MADDQ8WXG6 1647 aa15.49■□□□□ 0.07
PABPN1-203ENST00000553960 PPLO60437 1756 aa15.49■□□□□ 0.07
PABPN1-203ENST00000553960 ADAMTSL3P82987 1691 aa15.48■□□□□ 0.07
PABPN1-203ENST00000553960 NLRP1Q9C000 1473 aa15.47■□□□□ 0.07
PABPN1-203ENST00000553960 UGGT1Q9NYU2 1555 aa15.46■□□□□ 0.07
PABPN1-203ENST00000553960 DCAF11Q8TEB1 546 aa15.46■□□□□ 0.07
PABPN1-203ENST00000553960 CFAP65Q6ZU64 1925 aaKnown RBP15.46■□□□□ 0.07
PABPN1-203ENST00000553960 ARID4BQ4LE39 1312 aaPredicted RBP15.45■□□□□ 0.06
PABPN1-203ENST00000553960 SETBP1Q9Y6X0 1596 aa15.45■□□□□ 0.06
PABPN1-203ENST00000553960 IDI1Q13907 227 aa15.45■□□□□ 0.06
PABPN1-203ENST00000553960 FER1L4A9Z1Z3 1794 aa15.44■□□□□ 0.06
PABPN1-203ENST00000553960 NEXMIFQ5QGS0 1516 aa15.44■□□□□ 0.06
PABPN1-203ENST00000553960 EIF4G2P78344 907 aaKnown RBP eCLIP15.44■□□□□ 0.06
PABPN1-203ENST00000553960 SETD1BQ9UPS6 1966 aaKnown RBP15.44■□□□□ 0.06
PABPN1-203ENST00000553960 ESF1Q9H501 851 aaKnown RBP15.43■□□□□ 0.06
PABPN1-203ENST00000553960 PIK3C2GO75747 1445 aa15.43■□□□□ 0.06
PABPN1-203ENST00000553960 C3P01024 1663 aa15.42■□□□□ 0.06
PABPN1-203ENST00000553960 POLR1AO95602 1720 aaPredicted RBP15.42■□□□□ 0.06
PABPN1-203ENST00000553960 A2ML1A8K2U0 1454 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms