RNA–Protein interactions for RNA: ENST00000553889.5

PRKCH-209, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-209ENST00000553889 LAMC1P11047 1609 aa12.84□□□□□ -0.35
PRKCH-209ENST00000553889 USP47Q96K76 1375 aa12.83□□□□□ -0.36
PRKCH-209ENST00000553889 STAC3Q96MF2 364 aa12.83□□□□□ -0.36
PRKCH-209ENST00000553889 PRKRIP1Q9H875 184 aaPredicted RBP12.82□□□□□ -0.36
PRKCH-209ENST00000553889 NEURL4Q96JN8 1562 aa12.81□□□□□ -0.36
PRKCH-209ENST00000553889 CCDC144AA2RUR9 1427 aa12.81□□□□□ -0.36
PRKCH-209ENST00000553889 TRAPPC8Q9Y2L5 1435 aa12.8□□□□□ -0.36
PRKCH-209ENST00000553889 DEPDC5O75140 1603 aa12.8□□□□□ -0.36
PRKCH-209ENST00000553889 PRAG1Q86YV5 1406 aa12.79□□□□□ -0.36
PRKCH-209ENST00000553889 ZFYVE16Q7Z3T8 1539 aa12.79□□□□□ -0.36
PRKCH-209ENST00000553889 VWDEQ8N2E2 1590 aa12.79□□□□□ -0.36
PRKCH-209ENST00000553889 SUPT16HQ9Y5B9 1047 aaKnown RBP12.79□□□□□ -0.36
PRKCH-209ENST00000553889 DHX29Q7Z478 1369 aaKnown RBP12.79□□□□□ -0.36
PRKCH-209ENST00000553889 KTN1Q86UP2 1357 aaKnown RBP12.79□□□□□ -0.36
PRKCH-209ENST00000553889 INO80Q9ULG1 1556 aaPredicted RBP12.78□□□□□ -0.36
PRKCH-209ENST00000553889 BCORL1Q5H9F3 1711 aa12.78□□□□□ -0.36
PRKCH-209ENST00000553889 PTPRTO14522 1441 aa12.78□□□□□ -0.36
PRKCH-209ENST00000553889 TRPM1Q7Z4N2 1603 aa12.77□□□□□ -0.36
PRKCH-209ENST00000553889 EIF2AK4Q9P2K8 1649 aaKnown RBP12.77□□□□□ -0.37
PRKCH-209ENST00000553889 SPAG9O60271 1321 aaKnown RBP12.75□□□□□ -0.37
PRKCH-209ENST00000553889 A2MP01023 1474 aa12.75□□□□□ -0.37
PRKCH-209ENST00000553889 PRDM15P57071 1507 aaPredicted RBP12.75□□□□□ -0.37
PRKCH-209ENST00000553889 FANCAO15360 1455 aa12.74□□□□□ -0.37
PRKCH-209ENST00000553889 TRPM2O94759 1503 aa12.73□□□□□ -0.37
PRKCH-209ENST00000553889 ATP7AQ04656 1500 aa12.73□□□□□ -0.37
PRKCH-209ENST00000553889 CARD11Q9BXL7 1154 aa12.73□□□□□ -0.37
PRKCH-209ENST00000553889 TET3O43151 1660 aa12.73□□□□□ -0.37
PRKCH-209ENST00000553889 ASXL2Q76L83 1435 aa12.72□□□□□ -0.37
PRKCH-209ENST00000553889 DCAF11Q8TEB1 546 aa12.72□□□□□ -0.37
PRKCH-209ENST00000553889 LMTK2Q8IWU2 1503 aa12.71□□□□□ -0.38
PRKCH-209ENST00000553889 E9PCH4 1651 aa12.7□□□□□ -0.38
PRKCH-209ENST00000553889 RNF17Q9BXT8 1623 aaKnown RBP12.7□□□□□ -0.38
PRKCH-209ENST00000553889 WASHC2CQ9Y4E1 1318 aa12.7□□□□□ -0.38
PRKCH-209ENST00000553889 ERICH6BQ5W0A0 696 aa12.7□□□□□ -0.38
PRKCH-209ENST00000553889 OSCARQ8IYS5 282 aa12.7□□□□□ -0.38
PRKCH-209ENST00000553889 PHF23Q9BUL5 403 aaPredicted RBP12.7□□□□□ -0.38
PRKCH-209ENST00000553889 CFAP74Q9C0B2 1584 aa12.69□□□□□ -0.38
PRKCH-209ENST00000553889 ADGRL1O94910 1474 aa12.69□□□□□ -0.38
PRKCH-209ENST00000553889 SCAPERQ9BY12 1400 aa12.69□□□□□ -0.38
PRKCH-209ENST00000553889 KANK1Q14678 1352 aa12.68□□□□□ -0.38
PRKCH-209ENST00000553889 ZBED9Q6R2W3 1325 aa12.67□□□□□ -0.38
PRKCH-209ENST00000553889 ZNF518AQ6AHZ1 1483 aa12.67□□□□□ -0.38
PRKCH-209ENST00000553889 ST20-MTHFSA0A0A6YYL1 179 aa12.67□□□□□ -0.38
PRKCH-209ENST00000553889 INSRP06213 1382 aa12.67□□□□□ -0.38
PRKCH-209ENST00000553889 MROH1Q8NDA8 1641 aa12.66□□□□□ -0.38
PRKCH-209ENST00000553889 MLH3Q9UHC1 1453 aa12.66□□□□□ -0.38
PRKCH-209ENST00000553889 COL17A1Q9UMD9 1497 aaPredicted RBP12.66□□□□□ -0.38
PRKCH-209ENST00000553889 CEP152O94986 1710 aa12.66□□□□□ -0.38
PRKCH-209ENST00000553889 SPHKAPQ2M3C7 1700 aa12.66□□□□□ -0.38
PRKCH-209ENST00000553889 RALBP1Q15311 655 aa12.66□□□□□ -0.38
PRKCH-209ENST00000553889 AFAP1Q8N556 730 aa12.66□□□□□ -0.38
PRKCH-209ENST00000553889 KIAA1210Q9ULL0 1709 aa12.65□□□□□ -0.38
PRKCH-209ENST00000553889 BRD4O60885 1362 aaPredicted RBP12.65□□□□□ -0.38
PRKCH-209ENST00000553889 KIDINS220Q9ULH0 1771 aa12.64□□□□□ -0.39
PRKCH-209ENST00000553889 ZMYM4Q5VZL5 1548 aa12.64□□□□□ -0.39
PRKCH-209ENST00000553889 HNRNPUQ00839 825 aaKnown RBP eCLIP12.64□□□□□ -0.39
PRKCH-209ENST00000553889 TESK2Q96S53 571 aa12.64□□□□□ -0.39
PRKCH-209ENST00000553889 MRS2Q9HD23 443 aa12.64□□□□□ -0.39
PRKCH-209ENST00000553889 NEO1Q92859 1461 aa12.64□□□□□ -0.39
PRKCH-209ENST00000553889 MADDQ8WXG6 1647 aa12.63□□□□□ -0.39
PRKCH-209ENST00000553889 NEFLP07196 543 aa12.63□□□□□ -0.39
PRKCH-209ENST00000553889 CCDC184Q52MB2 194 aa12.63□□□□□ -0.39
PRKCH-209ENST00000553889 ZNF326Q5BKZ1 582 aaKnown RBP12.63□□□□□ -0.39
PRKCH-209ENST00000553889 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.63□□□□□ -0.39
PRKCH-209ENST00000553889 KDM2AQ9Y2K7 1162 aa12.63□□□□□ -0.39
PRKCH-209ENST00000553889 MYOM2P54296 1465 aa12.62□□□□□ -0.39
PRKCH-209ENST00000553889 LRPPRCP42704 1394 aaKnown RBP12.62□□□□□ -0.39
PRKCH-209ENST00000553889 SLC24A1O60721 1099 aa12.62□□□□□ -0.39
PRKCH-209ENST00000553889 EFCAB6Q5THR3 1501 aa12.62□□□□□ -0.39
PRKCH-209ENST00000553889 POGZQ7Z3K3 1410 aa12.62□□□□□ -0.39
PRKCH-209ENST00000553889 PER1O15534 1290 aaPredicted RBP12.61□□□□□ -0.39
PRKCH-209ENST00000553889 NPM1P06748 294 aaKnown RBP eCLIP12.61□□□□□ -0.39
PRKCH-209ENST00000553889 CLTCL1P53675 1640 aa12.61□□□□□ -0.39
PRKCH-209ENST00000553889 IQGAP1P46940 1657 aa12.61□□□□□ -0.39
PRKCH-209ENST00000553889 PARD3Q8TEW0 1356 aa12.6□□□□□ -0.39
PRKCH-209ENST00000553889 CD109Q6YHK3 1445 aa12.6□□□□□ -0.39
PRKCH-209ENST00000553889 NRXN1Q9ULB1 1477 aa12.59□□□□□ -0.39
PRKCH-209ENST00000553889 NBPF1Q3BBV0 1214 aa12.59□□□□□ -0.39
PRKCH-209ENST00000553889 PNISRQ8TF01 805 aaKnown RBP12.59□□□□□ -0.39
PRKCH-209ENST00000553889 MYBBP1AQ9BQG0 1328 aaKnown RBP12.59□□□□□ -0.39
PRKCH-209ENST00000553889 FKBP8Q14318 412 aa12.58□□□□□ -0.4
PRKCH-209ENST00000553889 SCAF11Q99590 1463 aaKnown RBP12.58□□□□□ -0.4
PRKCH-209ENST00000553889 SMG6Q86US8 1419 aaKnown RBP12.57□□□□□ -0.4
PRKCH-209ENST00000553889 RGL3Q3MIN7 710 aa12.57□□□□□ -0.4
PRKCH-209ENST00000553889 GLI2P10070 1586 aa12.56□□□□□ -0.4
PRKCH-209ENST00000553889 HECW2Q9P2P5 1572 aa12.56□□□□□ -0.4
PRKCH-209ENST00000553889 TMF1P82094 1093 aa12.56□□□□□ -0.4
PRKCH-209ENST00000553889 FRMPD1Q5SYB0 1578 aa12.56□□□□□ -0.4
PRKCH-209ENST00000553889 NPC1L1Q9UHC9 1359 aa12.56□□□□□ -0.4
PRKCH-209ENST00000553889 KIF3BO15066 747 aa12.55□□□□□ -0.4
PRKCH-209ENST00000553889 CDCA8Q53HL2 280 aa12.55□□□□□ -0.4
PRKCH-209ENST00000553889 RNF123Q5XPI4 1314 aa12.55□□□□□ -0.4
PRKCH-209ENST00000553889 SBNO2Q9Y2G9 1366 aa12.55□□□□□ -0.4
PRKCH-209ENST00000553889 MAP3K4Q9Y6R4 1608 aa12.55□□□□□ -0.4
PRKCH-209ENST00000553889 IFT172Q9UG01 1749 aa12.54□□□□□ -0.4
PRKCH-209ENST00000553889 NLRP13Q86W25 1043 aa12.54□□□□□ -0.4
PRKCH-209ENST00000553889 PPRC1Q5VV67 1664 aaKnown RBP12.54□□□□□ -0.4
PRKCH-209ENST00000553889 DISP3Q9P2K9 1392 aa12.54□□□□□ -0.4
PRKCH-209ENST00000553889 ARHGAP31Q2M1Z3 1444 aa12.54□□□□□ -0.4
PRKCH-209ENST00000553889 FAM9BQ8IZU0 186 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms