RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 POTEFA5A3E0 1075 aa10.72□□□□□ -0.69
ATXN3-221ENST00000553498 C7P10643 843 aa10.72□□□□□ -0.69
ATXN3-221ENST00000553498 RTN4Q9NQC3 1192 aaKnown RBP10.72□□□□□ -0.69
ATXN3-221ENST00000553498 PLB1Q6P1J6 1458 aa10.72□□□□□ -0.69
ATXN3-221ENST00000553498 RGL2O15211 777 aa10.71□□□□□ -0.69
ATXN3-221ENST00000553498 ITGAEP38570 1179 aa10.71□□□□□ -0.69
ATXN3-221ENST00000553498 SHROOM2Q13796 1616 aa10.71□□□□□ -0.69
ATXN3-221ENST00000553498 METRNQ9UJH8 293 aa10.71□□□□□ -0.69
ATXN3-221ENST00000553498 TIMELESSQ9UNS1 1208 aa10.71□□□□□ -0.69
ATXN3-221ENST00000553498 PLEKHD1A6NEE1 506 aa10.7□□□□□ -0.7
ATXN3-221ENST00000553498 POTEB2H3BUK9 544 aa10.7□□□□□ -0.7
ATXN3-221ENST00000553498 ROCK1Q13464 1354 aa10.69□□□□□ -0.7
ATXN3-221ENST00000553498 AMER1Q5JTC6 1135 aaPredicted RBP10.69□□□□□ -0.7
ATXN3-221ENST00000553498 LRRIQ1Q96JM4 1722 aa10.69□□□□□ -0.7
ATXN3-221ENST00000553498 PTPN23Q9H3S7 1636 aa10.69□□□□□ -0.7
ATXN3-221ENST00000553498 UACAQ9BZF9 1416 aa10.68□□□□□ -0.7
ATXN3-221ENST00000553498 CLASP1Q7Z460 1538 aa10.68□□□□□ -0.7
ATXN3-221ENST00000553498 ATP10BO94823 1461 aa10.68□□□□□ -0.7
ATXN3-221ENST00000553498 IER5LQ5T953 404 aa10.67□□□□□ -0.7
ATXN3-221ENST00000553498 ADCY10Q96PN6 1610 aa10.66□□□□□ -0.7
ATXN3-221ENST00000553498 VGFO15240 615 aaPredicted RBP10.66□□□□□ -0.7
ATXN3-221ENST00000553498 COLQQ9Y215 455 aaPredicted RBP10.66□□□□□ -0.7
ATXN3-221ENST00000553498 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.65□□□□□ -0.7
ATXN3-221ENST00000553498 ZFP91Q96JP5 570 aaPredicted RBP10.65□□□□□ -0.7
ATXN3-221ENST00000553498 UHRF1BP1LA0JNW5 1464 aa10.65□□□□□ -0.7
ATXN3-221ENST00000553498 NAIPQ13075 1403 aa10.65□□□□□ -0.7
ATXN3-221ENST00000553498 IRX5P78411 483 aaPredicted RBP10.64□□□□□ -0.71
ATXN3-221ENST00000553498 CFDP1Q9UEE9 299 aaPredicted RBP10.64□□□□□ -0.71
ATXN3-221ENST00000553498 PTPRKQ15262 1439 aa10.64□□□□□ -0.71
ATXN3-221ENST00000553498 GPATCH8Q9UKJ3 1502 aaKnown RBP10.63□□□□□ -0.71
ATXN3-221ENST00000553498 POTEJP0CG39 1038 aa10.63□□□□□ -0.71
ATXN3-221ENST00000553498 CHD1O14646 1710 aa10.63□□□□□ -0.71
ATXN3-221ENST00000553498 ABCC2Q92887 1545 aa10.63□□□□□ -0.71
ATXN3-221ENST00000553498 KIF14Q15058 1648 aa10.62□□□□□ -0.71
ATXN3-221ENST00000553498 DAPK1P53355 1430 aa10.62□□□□□ -0.71
ATXN3-221ENST00000553498 RSPH4AQ5TD94 716 aa10.62□□□□□ -0.71
ATXN3-221ENST00000553498 ABCC10Q5T3U5 1492 aa10.61□□□□□ -0.71
ATXN3-221ENST00000553498 ZNF316A6NFI3 1004 aaPredicted RBP10.61□□□□□ -0.71
ATXN3-221ENST00000553498 ARID3CA6NKF2 412 aa10.61□□□□□ -0.71
ATXN3-221ENST00000553498 ITSN2Q9NZM3 1697 aa10.6□□□□□ -0.71
ATXN3-221ENST00000553498 ABCC5O15440 1437 aa10.6□□□□□ -0.71
ATXN3-221ENST00000553498 MAPKBP1O60336 1514 aa10.6□□□□□ -0.71
ATXN3-221ENST00000553498 ILDR1Q86SU0 546 aaPredicted RBP10.6□□□□□ -0.71
ATXN3-221ENST00000553498 CABP2Q9NPB3 220 aa10.6□□□□□ -0.71
ATXN3-221ENST00000553498 DNMT1P26358 1616 aaKnown RBP10.58□□□□□ -0.72
ATXN3-221ENST00000553498 ADGRL2O95490 1459 aa10.58□□□□□ -0.72
ATXN3-221ENST00000553498 CAMSAP2Q08AD1 1489 aa10.58□□□□□ -0.72
ATXN3-221ENST00000553498 SHANK2Q9UPX8 1470 aa10.58□□□□□ -0.72
ATXN3-221ENST00000553498 PLSCR2Q9NRY7 297 aa10.58□□□□□ -0.72
ATXN3-221ENST00000553498 KDM5BQ9UGL1 1544 aa10.58□□□□□ -0.72
ATXN3-221ENST00000553498 ANKRD30AQ9BXX3 1397 aa10.56□□□□□ -0.72
ATXN3-221ENST00000553498 SEC24BO95487 1268 aa10.56□□□□□ -0.72
ATXN3-221ENST00000553498 MKRN3Q13064 507 aaKnown RBP10.56□□□□□ -0.72
ATXN3-221ENST00000553498 PDCD7Q8N8D1 485 aaKnown RBP10.56□□□□□ -0.72
ATXN3-221ENST00000553498 OCEL1Q9H607 264 aa10.56□□□□□ -0.72
ATXN3-221ENST00000553498 TAOK2Q9UL54 1235 aa10.56□□□□□ -0.72
ATXN3-221ENST00000553498 PLEKHH2Q8IVE3 1493 aa10.55□□□□□ -0.72
ATXN3-221ENST00000553498 EFCAB3Q8N7B9 438 aa10.55□□□□□ -0.72
ATXN3-221ENST00000553498 GOLGA2Q08379 1002 aa10.54□□□□□ -0.72
ATXN3-221ENST00000553498 NCOA1Q15788 1441 aa10.54□□□□□ -0.72
ATXN3-221ENST00000553498 OTUD5Q96G74 571 aa10.54□□□□□ -0.72
ATXN3-221ENST00000553498 BCL11BQ9C0K0 894 aaPredicted RBP10.54□□□□□ -0.72
ATXN3-221ENST00000553498 KIAA1107Q9UPP5 1409 aa10.54□□□□□ -0.72
ATXN3-221ENST00000553498 GCC2Q8IWJ2 1684 aa10.53□□□□□ -0.72
ATXN3-221ENST00000553498 TSPY4P0CV99 314 aa10.53□□□□□ -0.72
ATXN3-221ENST00000553498 TSPY10P0CW01 314 aa10.53□□□□□ -0.72
ATXN3-221ENST00000553498 RRP7BPQ9NSQ0 103 aa10.53□□□□□ -0.72
ATXN3-221ENST00000553498 ZNF644Q9H582 1327 aaPredicted RBP10.53□□□□□ -0.72
ATXN3-221ENST00000553498 ARHGEF5Q12774 1597 aa10.52□□□□□ -0.72
ATXN3-221ENST00000553498 PLCG2P16885 1265 aa10.52□□□□□ -0.73
ATXN3-221ENST00000553498 DIEXFQ68CQ4 756 aaKnown RBP10.52□□□□□ -0.73
ATXN3-221ENST00000553498 CHIC2Q9UKJ5 165 aa10.52□□□□□ -0.73
ATXN3-221ENST00000553498 STK25O00506 426 aa10.51□□□□□ -0.73
ATXN3-221ENST00000553498 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.51□□□□□ -0.733e-6■■□□□ 13.5
ATXN3-221ENST00000553498 ARAP3Q8WWN8 1544 aa10.51□□□□□ -0.73
ATXN3-221ENST00000553498 ERCC6L2Q5T890 1561 aa10.51□□□□□ -0.73
ATXN3-221ENST00000553498 CCDC141Q6ZP82 1450 aa10.5□□□□□ -0.73
ATXN3-221ENST00000553498 MPHOSPH9Q99550 1183 aa10.5□□□□□ -0.73
ATXN3-221ENST00000553498 ZNF777Q9ULD5 760 aaPredicted RBP10.5□□□□□ -0.73
ATXN3-221ENST00000553498 STK24Q9Y6E0 443 aa10.5□□□□□ -0.73
ATXN3-221ENST00000553498 PLCH2O75038 1416 aa10.5□□□□□ -0.73
ATXN3-221ENST00000553498 MBD5Q9P267 1494 aa10.49□□□□□ -0.73
ATXN3-221ENST00000553498 EFCAB2Q5VUJ9 269 aa10.49□□□□□ -0.73
ATXN3-221ENST00000553498 TRIM52Q96A61 297 aa10.49□□□□□ -0.73
ATXN3-221ENST00000553498 TONSLQ96HA7 1378 aa10.49□□□□□ -0.73
ATXN3-221ENST00000553498 C9orf84Q5VXU9 1444 aa10.49□□□□□ -0.73
ATXN3-221ENST00000553498 SOX12O15370 315 aa10.48□□□□□ -0.73
ATXN3-221ENST00000553498 PPP1R15AO75807 674 aaPredicted RBP10.48□□□□□ -0.73
ATXN3-221ENST00000553498 DPY19L2Q6NUT2 758 aa10.48□□□□□ -0.73
ATXN3-221ENST00000553498 ANKRD50Q9ULJ7 1429 aa10.48□□□□□ -0.73
ATXN3-221ENST00000553498 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.48□□□□□ -0.73
ATXN3-221ENST00000553498 PREX2Q70Z35 1606 aa10.47□□□□□ -0.73
ATXN3-221ENST00000553498 HS6ST3Q8IZP7 471 aa10.47□□□□□ -0.73
ATXN3-221ENST00000553498 SIN3AQ96ST3 1273 aa10.46□□□□□ -0.73
ATXN3-221ENST00000553498 WDR7Q9Y4E6 1490 aa10.46□□□□□ -0.74
ATXN3-221ENST00000553498 MAST1Q9Y2H9 1570 aa10.45□□□□□ -0.74
ATXN3-221ENST00000553498 ARHGAP5Q13017 1502 aa10.45□□□□□ -0.74
ATXN3-221ENST00000553498 NEUROD1Q13562 356 aa10.45□□□□□ -0.74
ATXN3-221ENST00000553498 MS4A4AQ96JQ5 239 aa10.45□□□□□ -0.74
ATXN3-221ENST00000553498 PHF8Q9UPP1 1060 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms