RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 KCNK17Q96T54 332 aa9.5□□□□□ -0.89
ATXN3-220ENST00000553491 EPAS1Q99814 870 aa9.5□□□□□ -0.89
ATXN3-220ENST00000553491 PTPREP23469 700 aa9.48□□□□□ -0.89
ATXN3-220ENST00000553491 TK2O00142 265 aa9.47□□□□□ -0.89
ATXN3-220ENST00000553491 HRO43593 1189 aa9.47□□□□□ -0.89
ATXN3-220ENST00000553491 ADGRD1Q6QNK2 874 aa9.47□□□□□ -0.89
ATXN3-220ENST00000553491 P3H3Q8IVL6 736 aa9.47□□□□□ -0.89
ATXN3-220ENST00000553491 COL9A1P20849 921 aa9.46□□□□□ -0.9
ATXN3-220ENST00000553491 OSBPP22059 807 aa9.46□□□□□ -0.9
ATXN3-220ENST00000553491 SLC4A5Q9BY07 1137 aa9.46□□□□□ -0.9
ATXN3-220ENST00000553491 EN1Q05925 392 aaPredicted RBP9.45□□□□□ -0.9
ATXN3-220ENST00000553491 C6orf132Q5T0Z8 1188 aa9.45□□□□□ -0.9
ATXN3-220ENST00000553491 ZBED2Q9BTP6 218 aa9.45□□□□□ -0.9
ATXN3-220ENST00000553491 GRXCR2A6NFK2 248 aa9.44□□□□□ -0.9
ATXN3-220ENST00000553491 MLLT3P42568 568 aaPredicted RBP9.44□□□□□ -0.9
ATXN3-220ENST00000553491 NBR1Q14596 966 aa9.44□□□□□ -0.9
ATXN3-220ENST00000553491 VPS9D1Q9Y2B5 631 aa9.44□□□□□ -0.9
ATXN3-220ENST00000553491 PPP1R3GB7ZBB8 358 aa9.43□□□□□ -0.9
ATXN3-220ENST00000553491 TSR1Q2NL82 804 aaKnown RBP9.42□□□□□ -0.9
ATXN3-220ENST00000553491 RBM33Q96EV2 1170 aaKnown RBP9.42□□□□□ -0.9
ATXN3-220ENST00000553491 BHMG1C9JSJ3 638 aaPredicted RBP9.41□□□□□ -0.9
ATXN3-220ENST00000553491 KCNH8Q96L42 1107 aa9.41□□□□□ -0.9
ATXN3-220ENST00000553491 SEMA3EO15041 775 aa9.4□□□□□ -0.9
ATXN3-220ENST00000553491 BCANQ96GW7 911 aa9.4□□□□□ -0.9
ATXN3-220ENST00000553491 MYT1LQ9UL68 1186 aa9.39□□□□□ -0.91
ATXN3-220ENST00000553491 MAP3K7O43318 606 aa9.37□□□□□ -0.91
ATXN3-220ENST00000553491 PROX2Q3B8N5 592 aa9.37□□□□□ -0.91
ATXN3-220ENST00000553491 CDHR5Q9HBB8 845 aa9.36□□□□□ -0.91
ATXN3-220ENST00000553491 TESPA1A2RU30 521 aaPredicted RBP9.35□□□□□ -0.91
ATXN3-220ENST00000553491 RNF166Q96A37 237 aaPredicted RBP9.35□□□□□ -0.91
ATXN3-220ENST00000553491 NPDC1Q9NQX5 325 aaPredicted RBP9.35□□□□□ -0.91
ATXN3-220ENST00000553491 ONECUT3O60422 494 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-220ENST00000553491 RABGEF1Q9UJ41 708 aa9.33□□□□□ -0.92
ATXN3-220ENST00000553491 TRIM6-TRIM34B2RNG4 842 aa9.32□□□□□ -0.92
ATXN3-220ENST00000553491 TSKSQ9UJT2 592 aa9.32□□□□□ -0.92
ATXN3-220ENST00000553491 FAM198AQ9UFP1 575 aa9.31□□□□□ -0.92
ATXN3-220ENST00000553491 CERKQ8TCT0 537 aa9.3□□□□□ -0.92
ATXN3-220ENST00000553491 KIAA1468Q9P260 1216 aa9.3□□□□□ -0.92
ATXN3-220ENST00000553491 PRSS12P56730 875 aa9.29□□□□□ -0.92
ATXN3-220ENST00000553491 CDCA7LQ96GN5 454 aa9.29□□□□□ -0.92
ATXN3-220ENST00000553491 C3orf80F5H4A9 247 aa9.28□□□□□ -0.92
ATXN3-220ENST00000553491 TTC13Q8NBP0 860 aa9.28□□□□□ -0.92
ATXN3-220ENST00000553491 PTGDRQ13258 359 aa9.26□□□□□ -0.93
ATXN3-220ENST00000553491 RBM26Q5T8P6 1007 aaKnown RBP9.26□□□□□ -0.93
ATXN3-220ENST00000553491 MRPL50Q8N5N7 158 aaKnown RBP9.26□□□□□ -0.93
ATXN3-220ENST00000553491 NBPF3Q9H094 633 aa9.26□□□□□ -0.93
ATXN3-220ENST00000553491 RBM27Q9P2N5 1060 aaKnown RBP9.26□□□□□ -0.93
ATXN3-220ENST00000553491 LAPTM4BQ86VI4 370 aa9.24□□□□□ -0.93
ATXN3-220ENST00000553491 STAC3Q96MF2 364 aa9.24□□□□□ -0.93
ATXN3-220ENST00000553491 KCTD12Q96CX2 325 aaKnown RBP9.23□□□□□ -0.93
ATXN3-220ENST00000553491 SMYD5Q6GMV2 418 aa9.22□□□□□ -0.93
ATXN3-220ENST00000553491 PADI6Q6TGC4 694 aa9.22□□□□□ -0.93
ATXN3-220ENST00000553491 PACS2Q86VP3 889 aa9.22□□□□□ -0.93
ATXN3-220ENST00000553491 SEPT9Q9UHD8 586 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-220ENST00000553491 GPR37O15354 613 aa9.21□□□□□ -0.94
ATXN3-220ENST00000553491 NUTM2FA1L443 756 aa9.2□□□□□ -0.94
ATXN3-220ENST00000553491 PRKCSHP14314 528 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-220ENST00000553491 FAM98CQ17RN3 349 aaKnown RBP9.2□□□□□ -0.94
ATXN3-220ENST00000553491 THSD4Q6ZMP0 1018 aa9.2□□□□□ -0.94
ATXN3-220ENST00000553491 TATDN2Q93075 761 aa9.2□□□□□ -0.94
ATXN3-220ENST00000553491 WNT2BQ93097 391 aa9.2□□□□□ -0.94
ATXN3-220ENST00000553491 ZFRQ96KR1 1074 aaKnown RBP9.2□□□□□ -0.94
ATXN3-220ENST00000553491 SMAPO00193 183 aa9.19□□□□□ -0.94
ATXN3-220ENST00000553491 HCSTQ9UBK5 93 aa9.18□□□□□ -0.94
ATXN3-220ENST00000553491 RB1CC1Q8TDY2 1594 aa9.17□□□□□ -0.94
ATXN3-220ENST00000553491 GOLGA8CPA6NN73 597 aa9.17□□□□□ -0.94
ATXN3-220ENST00000553491 FCHSD2O94868 740 aa9.17□□□□□ -0.94
ATXN3-220ENST00000553491 NUDT18Q6ZVK8 323 aa9.17□□□□□ -0.94
ATXN3-220ENST00000553491 PNMA3Q9UL41 463 aa9.17□□□□□ -0.94
ATXN3-220ENST00000553491 NBPF26B4DH59 902 aa9.16□□□□□ -0.94
ATXN3-220ENST00000553491 EYA1Q99502 592 aa9.16□□□□□ -0.94
ATXN3-220ENST00000553491 SOWAHBA6NEL2 793 aa9.15□□□□□ -0.94
ATXN3-220ENST00000553491 FECHP22830 423 aa9.14□□□□□ -0.95
ATXN3-220ENST00000553491 BCAMP50895 628 aa9.14□□□□□ -0.95
ATXN3-220ENST00000553491 HIC1Q14526 733 aa9.14□□□□□ -0.95
ATXN3-220ENST00000553491 ANKK1Q8NFD2 765 aa9.14□□□□□ -0.95
ATXN3-220ENST00000553491 PTPN5P54829 565 aa9.13□□□□□ -0.95
ATXN3-220ENST00000553491 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.13□□□□□ -0.95
ATXN3-220ENST00000553491 ADGRG1Q9Y653 693 aa9.13□□□□□ -0.95
ATXN3-220ENST00000553491 TPRNQ4KMQ1 711 aa9.12□□□□□ -0.95
ATXN3-220ENST00000553491 NACADO15069 1562 aa9.12□□□□□ -0.95
ATXN3-220ENST00000553491 FAM161AQ3B820 660 aa9.11□□□□□ -0.95
ATXN3-220ENST00000553491 GNPATO15228 680 aa9.1□□□□□ -0.95
ATXN3-220ENST00000553491 SAMD7Q7Z3H4 446 aa9.1□□□□□ -0.95
ATXN3-220ENST00000553491 GPIHBP1Q8IV16 184 aa9.1□□□□□ -0.95
ATXN3-220ENST00000553491 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-220ENST00000553491 LRCH3Q96II8 777 aa9.08□□□□□ -0.96
ATXN3-220ENST00000553491 WBP1LQ9NX94 342 aa9.08□□□□□ -0.96
ATXN3-220ENST00000553491 UNC13AQ9UPW8 1703 aa9.07□□□□□ -0.96
ATXN3-220ENST00000553491 RBM46Q8TBY0 533 aaKnown RBP9.06□□□□□ -0.96
ATXN3-220ENST00000553491 PXYLP1Q8TE99 480 aa9.06□□□□□ -0.96
ATXN3-220ENST00000553491 TSR3Q9UJK0 312 aaKnown RBP9.06□□□□□ -0.96
ATXN3-220ENST00000553491 SWT1Q5T5J6 900 aaKnown RBP9.05□□□□□ -0.96
ATXN3-220ENST00000553491 HPS5Q9UPZ3 1129 aa9.05□□□□□ -0.96
ATXN3-220ENST00000553491 RCCD1A6NED2 376 aa9.04□□□□□ -0.96
ATXN3-220ENST00000553491 TULP1O00294 542 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-220ENST00000553491 LMOD2Q6P5Q4 547 aa9.04□□□□□ -0.96
ATXN3-220ENST00000553491 METTL3Q86U44 580 aaKnown RBP9.04□□□□□ -0.96
ATXN3-220ENST00000553491 ZCCHC6Q5VYS8 1495 aaKnown RBP9.03□□□□□ -0.96
ATXN3-220ENST00000553491 OATP04181 439 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms