RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 FBXW7Q969H0 707 aa10.82□□□□□ -0.68
SYNE2-210ENST00000553455 GPR153Q6NV75 609 aa10.81□□□□□ -0.68
SYNE2-210ENST00000553455 SCUBE2Q9NQ36 999 aa10.81□□□□□ -0.68
SYNE2-210ENST00000553455 PARP9Q8IXQ6 854 aa10.8□□□□□ -0.68
SYNE2-210ENST00000553455 ZSWIM6Q9HCJ5 1215 aa10.8□□□□□ -0.68
SYNE2-210ENST00000553455 MAMSTRQ6ZN01 415 aa10.79□□□□□ -0.68
SYNE2-210ENST00000553455 ZNF454Q8N9F8 522 aa10.78□□□□□ -0.68
SYNE2-210ENST00000553455 IL27Q8NEV9 243 aa10.78□□□□□ -0.68
SYNE2-210ENST00000553455 RIMBP2O15034 1052 aa10.77□□□□□ -0.69
SYNE2-210ENST00000553455 ZDHHC16Q969W1 377 aa10.77□□□□□ -0.69
SYNE2-210ENST00000553455 C6orf132Q5T0Z8 1188 aa10.76□□□□□ -0.69
SYNE2-210ENST00000553455 FAM117AQ9C073 453 aa10.76□□□□□ -0.69
SYNE2-210ENST00000553455 ADAM33Q9BZ11 813 aa10.75□□□□□ -0.69
SYNE2-210ENST00000553455 PLEKHG3A1L390 1219 aa10.73□□□□□ -0.69
SYNE2-210ENST00000553455 ZNF710Q8N1W2 664 aa10.73□□□□□ -0.69
SYNE2-210ENST00000553455 REPIN1Q9BWE0 567 aaKnown RBP10.73□□□□□ -0.69
SYNE2-210ENST00000553455 DAXXQ9UER7 740 aaPredicted RBP10.73□□□□□ -0.69
SYNE2-210ENST00000553455 PHOX2BQ99453 314 aa10.72□□□□□ -0.69
SYNE2-210ENST00000553455 LHX6Q9UPM6 363 aa10.72□□□□□ -0.69
SYNE2-210ENST00000553455 TTLL12Q14166 644 aaPredicted RBP10.71□□□□□ -0.69
SYNE2-210ENST00000553455 PADI6Q6TGC4 694 aa10.71□□□□□ -0.69
SYNE2-210ENST00000553455 TTC13Q8NBP0 860 aa10.71□□□□□ -0.69
SYNE2-210ENST00000553455 CERKQ8TCT0 537 aa10.71□□□□□ -0.69
SYNE2-210ENST00000553455 GIGYF2Q6Y7W6 1299 aaKnown RBP10.7□□□□□ -0.7
SYNE2-210ENST00000553455 TMUB1Q9BVT8 246 aa10.7□□□□□ -0.7
SYNE2-210ENST00000553455 FAM161AQ3B820 660 aa10.69□□□□□ -0.7
SYNE2-210ENST00000553455 DDRGK1Q96HY6 314 aa10.69□□□□□ -0.7
SYNE2-210ENST00000553455 RBM27Q9P2N5 1060 aaKnown RBP10.69□□□□□ -0.7
SYNE2-210ENST00000553455 MS4A1P11836 297 aa10.68□□□□□ -0.7
SYNE2-210ENST00000553455 ERICH6Q7L0X2 663 aa10.67□□□□□ -0.7
SYNE2-210ENST00000553455 METTL3Q86U44 580 aaKnown RBP10.67□□□□□ -0.7
SYNE2-210ENST00000553455 ADGRG1Q9Y653 693 aa10.67□□□□□ -0.7
SYNE2-210ENST00000553455 HOXB1P14653 301 aaPredicted RBP10.66□□□□□ -0.7
SYNE2-210ENST00000553455 PPP4R3BQ5MIZ7 849 aa10.66□□□□□ -0.7
SYNE2-210ENST00000553455 PRSS12P56730 875 aa10.65□□□□□ -0.7
SYNE2-210ENST00000553455 MDM2Q00987 491 aaPredicted RBP10.65□□□□□ -0.7
SYNE2-210ENST00000553455 OTUD5Q96G74 571 aa10.65□□□□□ -0.7
SYNE2-210ENST00000553455 BCL2L12Q9HB09 334 aa10.65□□□□□ -0.7
SYNE2-210ENST00000553455 SNPHO15079 494 aa10.64□□□□□ -0.71
SYNE2-210ENST00000553455 COL9A1P20849 921 aa10.64□□□□□ -0.71
SYNE2-210ENST00000553455 CLCN1P35523 988 aa10.64□□□□□ -0.71
SYNE2-210ENST00000553455 C14orf37Q86TY3 774 aa10.64□□□□□ -0.71
SYNE2-210ENST00000553455 PXYLP1Q8TE99 480 aa10.64□□□□□ -0.71
SYNE2-210ENST00000553455 CDCA7LQ96GN5 454 aa10.64□□□□□ -0.71
SYNE2-210ENST00000553455 GPCPD1Q9NPB8 672 aa10.64□□□□□ -0.71
SYNE2-210ENST00000553455 PSDA5PKW4 1024 aaPredicted RBP10.63□□□□□ -0.71
SYNE2-210ENST00000553455 OATP04181 439 aa10.63□□□□□ -0.71
SYNE2-210ENST00000553455 NLRP7Q8WX94 980 aa10.63□□□□□ -0.71
SYNE2-210ENST00000553455 FAM198AQ9UFP1 575 aa10.63□□□□□ -0.71
SYNE2-210ENST00000553455 PPP1R3GB7ZBB8 358 aa10.6□□□□□ -0.71
SYNE2-210ENST00000553455 PTPREP23469 700 aa10.58□□□□□ -0.72
SYNE2-210ENST00000553455 SSTR3P32745 418 aaPredicted RBP10.58□□□□□ -0.72
SYNE2-210ENST00000553455 FAM217BQ9NTX9 383 aaPredicted RBP10.58□□□□□ -0.72
SYNE2-210ENST00000553455 TSKSQ9UJT2 592 aa10.58□□□□□ -0.72
SYNE2-210ENST00000553455 C3orf80F5H4A9 247 aa10.57□□□□□ -0.72
SYNE2-210ENST00000553455 GOPCQ9HD26 462 aa10.57□□□□□ -0.72
SYNE2-210ENST00000553455 RBM46Q8TBY0 533 aaKnown RBP10.55□□□□□ -0.72
SYNE2-210ENST00000553455 EYA1Q99502 592 aa10.55□□□□□ -0.72
SYNE2-210ENST00000553455 BEGAINQ9BUH8 593 aa10.53□□□□□ -0.72
SYNE2-210ENST00000553455 TRIM6-TRIM34B2RNG4 842 aa10.52□□□□□ -0.73
SYNE2-210ENST00000553455 SH3D19Q5HYK7 790 aa10.52□□□□□ -0.73
SYNE2-210ENST00000553455 PLSCR2Q9NRY7 297 aa10.52□□□□□ -0.73
SYNE2-210ENST00000553455 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.51□□□□□ -0.73
SYNE2-210ENST00000553455 RCCD1A6NED2 376 aa10.51□□□□□ -0.73
SYNE2-210ENST00000553455 LHX8Q68G74 356 aa10.51□□□□□ -0.73
SYNE2-210ENST00000553455 KCNK17Q96T54 332 aa10.51□□□□□ -0.73
SYNE2-210ENST00000553455 PROX2Q3B8N5 592 aa10.5□□□□□ -0.73
SYNE2-210ENST00000553455 NUDT18Q6ZVK8 323 aa10.5□□□□□ -0.73
SYNE2-210ENST00000553455 NBPF26B4DH59 902 aa10.49□□□□□ -0.73
SYNE2-210ENST00000553455 POTEEQ6S8J3 1075 aa10.48□□□□□ -0.73
SYNE2-210ENST00000553455 TATDN2Q93075 761 aa10.48□□□□□ -0.73
SYNE2-210ENST00000553455 PNMA3Q9UL41 463 aa10.48□□□□□ -0.73
SYNE2-210ENST00000553455 PCMTD1Q96MG8 357 aaPredicted RBP10.47□□□□□ -0.73
SYNE2-210ENST00000553455 ZBED2Q9BTP6 218 aa10.47□□□□□ -0.73
SYNE2-210ENST00000553455 ONECUT3O60422 494 aaPredicted RBP10.46□□□□□ -0.73
SYNE2-210ENST00000553455 DNAJB2P25686 324 aa10.46□□□□□ -0.73
SYNE2-210ENST00000553455 PSEN2P49810 448 aa10.46□□□□□ -0.73
SYNE2-210ENST00000553455 SKIV2LQ15477 1246 aaKnown RBP10.46□□□□□ -0.73
SYNE2-210ENST00000553455 PACS2Q86VP3 889 aa10.46□□□□□ -0.73
SYNE2-210ENST00000553455 SMAPO00193 183 aa10.45□□□□□ -0.74
SYNE2-210ENST00000553455 VARS2Q5ST30 1063 aaKnown RBP10.45□□□□□ -0.74
SYNE2-210ENST00000553455 RSPH6AQ9H0K4 717 aa10.45□□□□□ -0.74
SYNE2-210ENST00000553455 TMEM134Q9H6X4 195 aa10.45□□□□□ -0.74
SYNE2-210ENST00000553455 ST18O60284 1047 aa10.44□□□□□ -0.74
SYNE2-210ENST00000553455 CD46P15529 392 aa10.44□□□□□ -0.74
SYNE2-210ENST00000553455 MYSM1Q5VVJ2 828 aa10.44□□□□□ -0.74
SYNE2-210ENST00000553455 ERBB3P21860 1342 aa10.43□□□□□ -0.74
SYNE2-210ENST00000553455 PROCA1Q8NCQ7 364 aaPredicted RBP10.42□□□□□ -0.74
SYNE2-210ENST00000553455 KCNH8Q96L42 1107 aa10.42□□□□□ -0.74
SYNE2-210ENST00000553455 TBC1D2Q9BYX2 928 aa10.42□□□□□ -0.74
SYNE2-210ENST00000553455 KIAA1468Q9P260 1216 aa10.42□□□□□ -0.74
SYNE2-210ENST00000553455 ARHGAP33O14559 1287 aa10.41□□□□□ -0.74
SYNE2-210ENST00000553455 DMRTA1Q5VZB9 504 aa10.41□□□□□ -0.74
SYNE2-210ENST00000553455 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.4□□□□□ -0.74
SYNE2-210ENST00000553455 SLC4A5Q9BY07 1137 aa10.4□□□□□ -0.74
SYNE2-210ENST00000553455 POLR3EQ9NVU0 708 aa10.4□□□□□ -0.74
SYNE2-210ENST00000553455 AXIN2Q9Y2T1 843 aa10.4□□□□□ -0.74
SYNE2-210ENST00000553455 DDX11L8A8MPP1 907 aa10.39□□□□□ -0.75
SYNE2-210ENST00000553455 EMP3P54852 163 aa10.39□□□□□ -0.75
SYNE2-210ENST00000553455 SULF1Q8IWU6 871 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms