RNA–Protein interactions for RNA: ENST00000553410.1

AC107958.3-201, humanhuman

TSL 3 BASIC

Gene AC107958.3, Length 431 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC107958.3-201ENST00000553410 WBP1LQ9NX94 342 aa6.39□□□□□ -1.39
AC107958.3-201ENST00000553410 NRG2O14511 850 aaPredicted RBP6.37□□□□□ -1.39
AC107958.3-201ENST00000553410 ONECUT3O60422 494 aaPredicted RBP6.37□□□□□ -1.39
AC107958.3-201ENST00000553410 LRCH3Q96II8 777 aa6.37□□□□□ -1.39
AC107958.3-201ENST00000553410 KIAA1468Q9P260 1216 aa6.37□□□□□ -1.39
AC107958.3-201ENST00000553410 TSR3Q9UJK0 312 aaKnown RBP6.37□□□□□ -1.39
AC107958.3-201ENST00000553410 TYW1BQ6NUM6 668 aa6.36□□□□□ -1.39
AC107958.3-201ENST00000553410 DDX27Q96GQ7 796 aaKnown RBP6.36□□□□□ -1.39
AC107958.3-201ENST00000553410 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.36□□□□□ -1.39
AC107958.3-201ENST00000553410 PCDHGA10Q9Y5H3 936 aa6.36□□□□□ -1.39
AC107958.3-201ENST00000553410 PHF14O94880 888 aa6.35□□□□□ -1.39
AC107958.3-201ENST00000553410 CHGAP10645 457 aaKnown RBP6.35□□□□□ -1.39
AC107958.3-201ENST00000553410 COL9A1P20849 921 aa6.35□□□□□ -1.39
AC107958.3-201ENST00000553410 FAM98CQ17RN3 349 aaKnown RBP6.35□□□□□ -1.39
AC107958.3-201ENST00000553410 NCKAP5LQ9HCH0 1330 aa6.34□□□□□ -1.39
AC107958.3-201ENST00000553410 SEPT9Q9UHD8 586 aaPredicted RBP6.34□□□□□ -1.39
AC107958.3-201ENST00000553410 HPS5Q9UPZ3 1129 aa6.34□□□□□ -1.39
AC107958.3-201ENST00000553410 LCE2BO14633 110 aa6.33□□□□□ -1.4
AC107958.3-201ENST00000553410 ZNF787Q6DD87 383 aa6.32□□□□□ -1.4
AC107958.3-201ENST00000553410 LARP6Q9BRS8 491 aaKnown RBP6.32□□□□□ -1.4
AC107958.3-201ENST00000553410 PRKD2Q9BZL6 878 aa6.32□□□□□ -1.4
AC107958.3-201ENST00000553410 TRIM6-TRIM34B2RNG4 842 aa6.31□□□□□ -1.4
AC107958.3-201ENST00000553410 DNAJC5Q9H3Z4 198 aa6.31□□□□□ -1.4
AC107958.3-201ENST00000553410 V9GY48 417 aaPredicted RBP6.31□□□□□ -1.4
AC107958.3-201ENST00000553410 PPP4CP60510 307 aa6.3□□□□□ -1.4
AC107958.3-201ENST00000553410 EPAS1Q99814 870 aa6.3□□□□□ -1.4
AC107958.3-201ENST00000553410 C6orf132Q5T0Z8 1188 aa6.29□□□□□ -1.4
AC107958.3-201ENST00000553410 NKX1-1Q15270 411 aaPredicted RBP6.28□□□□□ -1.4
AC107958.3-201ENST00000553410 MFSD10Q14728 455 aa6.27□□□□□ -1.41
AC107958.3-201ENST00000553410 PACS2Q86VP3 889 aa6.27□□□□□ -1.41
AC107958.3-201ENST00000553410 EMILIN3Q9NT22 766 aa6.27□□□□□ -1.41
AC107958.3-201ENST00000553410 PDZRN3Q9UPQ7 1066 aa6.27□□□□□ -1.41
AC107958.3-201ENST00000553410 PPP1R18Q6NYC8 613 aa6.26□□□□□ -1.41
AC107958.3-201ENST00000553410 IL21Q9HBE4 155 aa6.26□□□□□ -1.41
AC107958.3-201ENST00000553410 TJAP1Q5JTD0 557 aa6.25□□□□□ -1.41
AC107958.3-201ENST00000553410 GGCXP38435 758 aa6.24□□□□□ -1.41
AC107958.3-201ENST00000553410 ZNF775Q96BV0 537 aaPredicted RBP6.24□□□□□ -1.41
AC107958.3-201ENST00000553410 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.24□□□□□ -1.41
AC107958.3-201ENST00000553410 RBM33Q96EV2 1170 aaKnown RBP6.23□□□□□ -1.41
AC107958.3-201ENST00000553410 MTRQ99707 1265 aa6.23□□□□□ -1.41
AC107958.3-201ENST00000553410 NECTIN2Q92692 538 aa6.21□□□□□ -1.42
AC107958.3-201ENST00000553410 HDGFP51858 240 aaKnown RBP6.2□□□□□ -1.42
AC107958.3-201ENST00000553410 SAMD7Q7Z3H4 446 aa6.2□□□□□ -1.42
AC107958.3-201ENST00000553410 MAP3K7O43318 606 aa6.19□□□□□ -1.42
AC107958.3-201ENST00000553410 RNF40O75150 1001 aa6.19□□□□□ -1.42
AC107958.3-201ENST00000553410 TSKSQ9UJT2 592 aa6.19□□□□□ -1.42
AC107958.3-201ENST00000553410 NBPF26B4DH59 902 aa6.18□□□□□ -1.42
AC107958.3-201ENST00000553410 DPYSL4O14531 572 aa6.18□□□□□ -1.42
AC107958.3-201ENST00000553410 EN1Q05925 392 aaPredicted RBP6.18□□□□□ -1.42
AC107958.3-201ENST00000553410 NBR1Q14596 966 aa6.18□□□□□ -1.42
AC107958.3-201ENST00000553410 PKDCCQ504Y2 493 aa6.18□□□□□ -1.42
AC107958.3-201ENST00000553410 DDX12PQ92771 950 aa6.18□□□□□ -1.42
AC107958.3-201ENST00000553410 GTPBP6O43824 516 aaPredicted RBP6.17□□□□□ -1.42
AC107958.3-201ENST00000553410 CERKQ8TCT0 537 aa6.17□□□□□ -1.42
AC107958.3-201ENST00000553410 TMUB1Q9BVT8 246 aa6.17□□□□□ -1.42
AC107958.3-201ENST00000553410 ZNF516Q92618 1163 aa6.16□□□□□ -1.42
AC107958.3-201ENST00000553410 CDCA7LQ96GN5 454 aa6.16□□□□□ -1.42
AC107958.3-201ENST00000553410 SLC4A3P48751 1232 aa6.15□□□□□ -1.42
AC107958.3-201ENST00000553410 CAMK2BQ13554 666 aa6.15□□□□□ -1.42
AC107958.3-201ENST00000553410 SMAPO00193 183 aa6.14□□□□□ -1.43
AC107958.3-201ENST00000553410 PRSS12P56730 875 aa6.14□□□□□ -1.43
AC107958.3-201ENST00000553410 TSR1Q2NL82 804 aaKnown RBP6.14□□□□□ -1.43
AC107958.3-201ENST00000553410 PNMA3Q9UL41 463 aa6.14□□□□□ -1.43
AC107958.3-201ENST00000553410 DGAT1O75907 488 aa6.13□□□□□ -1.43
AC107958.3-201ENST00000553410 APLP1P51693 650 aa6.13□□□□□ -1.43
AC107958.3-201ENST00000553410 COPS2P61201 443 aa6.12□□□□□ -1.43
AC107958.3-201ENST00000553410 TATDN2Q93075 761 aa6.12□□□□□ -1.43
AC107958.3-201ENST00000553410 MYT1Q01538 1121 aa6.11□□□□□ -1.43
AC107958.3-201ENST00000553410 SLF2Q8IX21 1173 aa6.11□□□□□ -1.43
AC107958.3-201ENST00000553410 NKX2-3Q8TAU0 364 aa6.11□□□□□ -1.43
AC107958.3-201ENST00000553410 PRR14Q9BWN1 585 aa6.11□□□□□ -1.43
AC107958.3-201ENST00000553410 SLC19A1P41440 591 aa6.1□□□□□ -1.43
AC107958.3-201ENST00000553410 PRR20EP86478 221 aa6.1□□□□□ -1.43
AC107958.3-201ENST00000553410 PRR20CP86479 221 aa6.1□□□□□ -1.43
AC107958.3-201ENST00000553410 PRR20DP86480 221 aa6.1□□□□□ -1.43
AC107958.3-201ENST00000553410 PRR20BP86481 221 aa6.1□□□□□ -1.43
AC107958.3-201ENST00000553410 PRR20AP86496 221 aa6.1□□□□□ -1.43
AC107958.3-201ENST00000553410 ZPR1O75312 459 aa6.09□□□□□ -1.43
AC107958.3-201ENST00000553410 PDIA6Q15084 440 aa6.09□□□□□ -1.43
AC107958.3-201ENST00000553410 RBM27Q9P2N5 1060 aaKnown RBP6.09□□□□□ -1.43
AC107958.3-201ENST00000553410 FAM187AA6NFU0 413 aa6.08□□□□□ -1.44
AC107958.3-201ENST00000553410 SPDYE16A6NNV3 312 aaPredicted RBP6.08□□□□□ -1.44
AC107958.3-201ENST00000553410 TREML4Q6UXN2 200 aa6.08□□□□□ -1.44
AC107958.3-201ENST00000553410 TRIM67Q6ZTA4 783 aa6.08□□□□□ -1.44
AC107958.3-201ENST00000553410 NUDT18Q6ZVK8 323 aa6.08□□□□□ -1.44
AC107958.3-201ENST00000553410 ZNF598Q86UK7 904 aaKnown RBP6.08□□□□□ -1.44
AC107958.3-201ENST00000553410 CADPS2Q86UW7 1296 aa6.08□□□□□ -1.44
AC107958.3-201ENST00000553410 FAM198AQ9UFP1 575 aa6.07□□□□□ -1.44
AC107958.3-201ENST00000553410 RNF223E7ERA6 249 aa6.06□□□□□ -1.44
AC107958.3-201ENST00000553410 SPRYD7Q5W111 196 aa6.06□□□□□ -1.44
AC107958.3-201ENST00000553410 PCDHB3Q9Y5E6 796 aa6.06□□□□□ -1.44
AC107958.3-201ENST00000553410 ZNF697Q5TEC3 545 aa6.05□□□□□ -1.44
AC107958.3-201ENST00000553410 ANKLE1Q8NAG6 615 aa6.05□□□□□ -1.44
AC107958.3-201ENST00000553410 POTECB2RU33 542 aa6.04□□□□□ -1.44
AC107958.3-201ENST00000553410 SWT1Q5T5J6 900 aaKnown RBP6.04□□□□□ -1.44
AC107958.3-201ENST00000553410 C3orf80F5H4A9 247 aa6.03□□□□□ -1.44
AC107958.3-201ENST00000553410 GRXCR2A6NFK2 248 aa6.02□□□□□ -1.45
AC107958.3-201ENST00000553410 TNFRSF10AO00220 468 aa6.02□□□□□ -1.45
AC107958.3-201ENST00000553410 STK17AQ9UEE5 414 aa6.02□□□□□ -1.45
AC107958.3-201ENST00000553410 DCAF8L2P0C7V8 631 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms