RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 MLLT3P42568 568 aaPredicted RBP12.07□□□□□ -0.48
ATXN3-218ENST00000553309 DMRTA1Q5VZB9 504 aa12.07□□□□□ -0.48
ATXN3-218ENST00000553309 OSBPP22059 807 aa12.06□□□□□ -0.48
ATXN3-218ENST00000553309 C6orf132Q5T0Z8 1188 aa12.06□□□□□ -0.48
ATXN3-218ENST00000553309 SPNS2Q8IVW8 549 aa12.04□□□□□ -0.48
ATXN3-218ENST00000553309 MAP3K7O43318 606 aa12.03□□□□□ -0.48
ATXN3-218ENST00000553309 PRIM1P49642 420 aaKnown RBP12.03□□□□□ -0.48
ATXN3-218ENST00000553309 EN1Q05925 392 aaPredicted RBP12.03□□□□□ -0.48
ATXN3-218ENST00000553309 SLC24A1O60721 1099 aa12.01□□□□□ -0.49
ATXN3-218ENST00000553309 COL9A1P20849 921 aa12□□□□□ -0.49
ATXN3-218ENST00000553309 TSR1Q2NL82 804 aaKnown RBP12□□□□□ -0.49
ATXN3-218ENST00000553309 PLSCR2Q9NRY7 297 aa12□□□□□ -0.49
ATXN3-218ENST00000553309 TK2O00142 265 aa11.99□□□□□ -0.49
ATXN3-218ENST00000553309 ADGRD1Q6QNK2 874 aa11.99□□□□□ -0.49
ATXN3-218ENST00000553309 TESPA1A2RU30 521 aaPredicted RBP11.98□□□□□ -0.49
ATXN3-218ENST00000553309 PPP1R3GB7ZBB8 358 aa11.98□□□□□ -0.49
ATXN3-218ENST00000553309 ZBED2Q9BTP6 218 aa11.97□□□□□ -0.49
ATXN3-218ENST00000553309 SLC4A5Q9BY07 1137 aa11.97□□□□□ -0.49
ATXN3-218ENST00000553309 VPS9D1Q9Y2B5 631 aa11.97□□□□□ -0.49
ATXN3-218ENST00000553309 SMYD5Q6GMV2 418 aa11.96□□□□□ -0.49
ATXN3-218ENST00000553309 MMRN1Q13201 1228 aa11.92□□□□□ -0.5
ATXN3-218ENST00000553309 PROX2Q3B8N5 592 aa11.92□□□□□ -0.5
ATXN3-218ENST00000553309 STAC3Q96MF2 364 aa11.92□□□□□ -0.5
ATXN3-218ENST00000553309 HRO43593 1189 aa11.91□□□□□ -0.5
ATXN3-218ENST00000553309 CDHR5Q9HBB8 845 aa11.91□□□□□ -0.5
ATXN3-218ENST00000553309 CERKQ8TCT0 537 aa11.9□□□□□ -0.5
ATXN3-218ENST00000553309 NUTM2FA1L443 756 aa11.89□□□□□ -0.51
ATXN3-218ENST00000553309 MYT1LQ9UL68 1186 aa11.89□□□□□ -0.51
ATXN3-218ENST00000553309 RBM26Q5T8P6 1007 aaKnown RBP11.88□□□□□ -0.51
ATXN3-218ENST00000553309 NPDC1Q9NQX5 325 aaPredicted RBP11.88□□□□□ -0.51
ATXN3-218ENST00000553309 KIAA1468Q9P260 1216 aa11.88□□□□□ -0.51
ATXN3-218ENST00000553309 ONECUT3O60422 494 aaPredicted RBP11.87□□□□□ -0.51
ATXN3-218ENST00000553309 PRSS12P56730 875 aa11.87□□□□□ -0.51
ATXN3-218ENST00000553309 RABGEF1Q9UJ41 708 aa11.87□□□□□ -0.51
ATXN3-218ENST00000553309 TRIM6-TRIM34B2RNG4 842 aa11.86□□□□□ -0.51
ATXN3-218ENST00000553309 BHMG1C9JSJ3 638 aaPredicted RBP11.86□□□□□ -0.51
ATXN3-218ENST00000553309 CDCA7LQ96GN5 454 aa11.86□□□□□ -0.51
ATXN3-218ENST00000553309 TULP1O00294 542 aaPredicted RBP11.84□□□□□ -0.51
ATXN3-218ENST00000553309 PACS2Q86VP3 889 aa11.84□□□□□ -0.51
ATXN3-218ENST00000553309 TSKSQ9UJT2 592 aa11.83□□□□□ -0.52
ATXN3-218ENST00000553309 PTGDRQ13258 359 aa11.82□□□□□ -0.52
ATXN3-218ENST00000553309 MRPL50Q8N5N7 158 aaKnown RBP11.82□□□□□ -0.52
ATXN3-218ENST00000553309 RNF166Q96A37 237 aaPredicted RBP11.82□□□□□ -0.52
ATXN3-218ENST00000553309 NBPF3Q9H094 633 aa11.82□□□□□ -0.52
ATXN3-218ENST00000553309 FAM198AQ9UFP1 575 aa11.8□□□□□ -0.52
ATXN3-218ENST00000553309 GOLGA8CPA6NN73 597 aa11.79□□□□□ -0.52
ATXN3-218ENST00000553309 FCHSD2O94868 740 aa11.79□□□□□ -0.52
ATXN3-218ENST00000553309 PADI6Q6TGC4 694 aa11.77□□□□□ -0.53
ATXN3-218ENST00000553309 RBM27Q9P2N5 1060 aaKnown RBP11.77□□□□□ -0.53
ATXN3-218ENST00000553309 SEPT9Q9UHD8 586 aaPredicted RBP11.77□□□□□ -0.53
ATXN3-218ENST00000553309 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.76□□□□□ -0.53
ATXN3-218ENST00000553309 LAPTM4BQ86VI4 370 aa11.76□□□□□ -0.53
ATXN3-218ENST00000553309 TTC13Q8NBP0 860 aa11.76□□□□□ -0.53
ATXN3-218ENST00000553309 TATDN2Q93075 761 aa11.75□□□□□ -0.53
ATXN3-218ENST00000553309 KCTD12Q96CX2 325 aaKnown RBP11.75□□□□□ -0.53
ATXN3-218ENST00000553309 C3orf80F5H4A9 247 aa11.74□□□□□ -0.53
ATXN3-218ENST00000553309 SMAPO00193 183 aa11.74□□□□□ -0.53
ATXN3-218ENST00000553309 GPIHBP1Q8IV16 184 aa11.74□□□□□ -0.53
ATXN3-218ENST00000553309 PNMA3Q9UL41 463 aa11.74□□□□□ -0.53
ATXN3-218ENST00000553309 NUDT18Q6ZVK8 323 aa11.73□□□□□ -0.53
ATXN3-218ENST00000553309 HIC1Q14526 733 aa11.72□□□□□ -0.53
ATXN3-218ENST00000553309 FAM98CQ17RN3 349 aaKnown RBP11.72□□□□□ -0.53
ATXN3-218ENST00000553309 WNT2BQ93097 391 aa11.72□□□□□ -0.53
ATXN3-218ENST00000553309 NBPF26B4DH59 902 aa11.71□□□□□ -0.53
ATXN3-218ENST00000553309 ZFRQ96KR1 1074 aaKnown RBP11.71□□□□□ -0.53
ATXN3-218ENST00000553309 GNPATO15228 680 aa11.69□□□□□ -0.54
ATXN3-218ENST00000553309 GPR37O15354 613 aa11.69□□□□□ -0.54
ATXN3-218ENST00000553309 LMOD2Q6P5Q4 547 aa11.68□□□□□ -0.54
ATXN3-218ENST00000553309 ANKK1Q8NFD2 765 aa11.68□□□□□ -0.54
ATXN3-218ENST00000553309 FECHP22830 423 aa11.67□□□□□ -0.54
ATXN3-218ENST00000553309 FAM161AQ3B820 660 aa11.67□□□□□ -0.54
ATXN3-218ENST00000553309 PTPN5P54829 565 aa11.66□□□□□ -0.54
ATXN3-218ENST00000553309 EYA1Q99502 592 aa11.66□□□□□ -0.54
ATXN3-218ENST00000553309 HCSTQ9UBK5 93 aa11.66□□□□□ -0.54
ATXN3-218ENST00000553309 THSD4Q6ZMP0 1018 aa11.65□□□□□ -0.54
ATXN3-218ENST00000553309 BCANQ96GW7 911 aa11.65□□□□□ -0.54
ATXN3-218ENST00000553309 ADGRG1Q9Y653 693 aa11.65□□□□□ -0.54
ATXN3-218ENST00000553309 RBM46Q8TBY0 533 aaKnown RBP11.64□□□□□ -0.55
ATXN3-218ENST00000553309 SOWAHBA6NEL2 793 aa11.63□□□□□ -0.55
ATXN3-218ENST00000553309 HDGFP51858 240 aaKnown RBP11.63□□□□□ -0.55
ATXN3-218ENST00000553309 OATP04181 439 aa11.62□□□□□ -0.55
ATXN3-218ENST00000553309 BCAMP50895 628 aa11.62□□□□□ -0.55
ATXN3-218ENST00000553309 SAMD7Q7Z3H4 446 aa11.61□□□□□ -0.55
ATXN3-218ENST00000553309 LRCH3Q96II8 777 aa11.61□□□□□ -0.55
ATXN3-218ENST00000553309 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.61□□□□□ -0.55
ATXN3-218ENST00000553309 RCCD1A6NED2 376 aa11.57□□□□□ -0.56
ATXN3-218ENST00000553309 SWT1Q5T5J6 900 aaKnown RBP11.57□□□□□ -0.56
ATXN3-218ENST00000553309 PXYLP1Q8TE99 480 aa11.57□□□□□ -0.56
ATXN3-218ENST00000553309 ZC3H15Q8WU90 426 aaKnown RBP11.57□□□□□ -0.56
ATXN3-218ENST00000553309 DNAJB2P25686 324 aa11.56□□□□□ -0.56
ATXN3-218ENST00000553309 METTL3Q86U44 580 aaKnown RBP11.55□□□□□ -0.56
ATXN3-218ENST00000553309 TSR3Q9UJK0 312 aaKnown RBP11.55□□□□□ -0.56
ATXN3-218ENST00000553309 HPS5Q9UPZ3 1129 aa11.55□□□□□ -0.56
ATXN3-218ENST00000553309 PPP4CP60510 307 aa11.54□□□□□ -0.56
ATXN3-218ENST00000553309 MAP2K5Q13163 448 aa11.54□□□□□ -0.56
ATXN3-218ENST00000553309 WBP1LQ9NX94 342 aa11.54□□□□□ -0.56
ATXN3-218ENST00000553309 MINK1Q8N4C8 1332 aaPredicted RBP11.54□□□□□ -0.56
ATXN3-218ENST00000553309 IRF6O14896 467 aa11.53□□□□□ -0.56
ATXN3-218ENST00000553309 KRI1Q8N9T8 703 aaKnown RBP11.53□□□□□ -0.56
ATXN3-218ENST00000553309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms