RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 DCAF11Q8TEB1 546 aa12.75□□□□□ -0.37
RAB3IP-218ENST00000553099 WASHC2AQ641Q2 1341 aa12.74□□□□□ -0.37
RAB3IP-218ENST00000553099 ANP32CO43423 234 aa12.74□□□□□ -0.37
RAB3IP-218ENST00000553099 RGL3Q3MIN7 710 aa12.73□□□□□ -0.37
RAB3IP-218ENST00000553099 CFAP74Q9C0B2 1584 aa12.73□□□□□ -0.37
RAB3IP-218ENST00000553099 KIF3BO15066 747 aa12.72□□□□□ -0.37
RAB3IP-218ENST00000553099 ZNF518AQ6AHZ1 1483 aa12.71□□□□□ -0.37
RAB3IP-218ENST00000553099 KIDINS220Q9ULH0 1771 aa12.71□□□□□ -0.37
RAB3IP-218ENST00000553099 RIMBP3CA6NJZ7 1639 aa12.71□□□□□ -0.37
RAB3IP-218ENST00000553099 RIMBP3BA6NNM3 1639 aa12.71□□□□□ -0.37
RAB3IP-218ENST00000553099 RIMBP3Q9UFD9 1639 aa12.71□□□□□ -0.37
RAB3IP-218ENST00000553099 PLA2R1Q13018 1463 aa12.71□□□□□ -0.37
RAB3IP-218ENST00000553099 E9PCH4 1651 aa12.7□□□□□ -0.38
RAB3IP-218ENST00000553099 USP47Q96K76 1375 aa12.7□□□□□ -0.38
RAB3IP-218ENST00000553099 SENP3Q9H4L4 574 aaPredicted RBP12.7□□□□□ -0.38
RAB3IP-218ENST00000553099 C11orf95C9JLR9 678 aaPredicted RBP12.69□□□□□ -0.38
RAB3IP-218ENST00000553099 DEPDC5O75140 1603 aa12.69□□□□□ -0.38
RAB3IP-218ENST00000553099 POLR1AO95602 1720 aaPredicted RBP12.69□□□□□ -0.38
RAB3IP-218ENST00000553099 UHRF1BP1Q6BDS2 1440 aa12.69□□□□□ -0.38
RAB3IP-218ENST00000553099 SPATA31E1Q6ZUB1 1445 aa12.69□□□□□ -0.38
RAB3IP-218ENST00000553099 KANK1Q14678 1352 aa12.68□□□□□ -0.38
RAB3IP-218ENST00000553099 CARD11Q9BXL7 1154 aa12.68□□□□□ -0.38
RAB3IP-218ENST00000553099 RALGAPBQ86X10 1494 aa12.68□□□□□ -0.38
RAB3IP-218ENST00000553099 CCDC7Q96M83 1385 aa12.68□□□□□ -0.38
RAB3IP-218ENST00000553099 POGZQ7Z3K3 1410 aa12.67□□□□□ -0.38
RAB3IP-218ENST00000553099 POLR3GLQ9BT43 218 aa12.67□□□□□ -0.38
RAB3IP-218ENST00000553099 GTF3C3Q9Y5Q9 886 aa12.67□□□□□ -0.38
RAB3IP-218ENST00000553099 DHX29Q7Z478 1369 aaKnown RBP12.67□□□□□ -0.38
RAB3IP-218ENST00000553099 KDM5CP41229 1560 aa12.67□□□□□ -0.38
RAB3IP-218ENST00000553099 EIF2AK4Q9P2K8 1649 aaKnown RBP12.67□□□□□ -0.38
RAB3IP-218ENST00000553099 TET3O43151 1660 aa12.66□□□□□ -0.38
RAB3IP-218ENST00000553099 SPHKAPQ2M3C7 1700 aa12.66□□□□□ -0.38
RAB3IP-218ENST00000553099 HECW2Q9P2P5 1572 aa12.66□□□□□ -0.38
RAB3IP-218ENST00000553099 KIF7Q2M1P5 1343 aa12.65□□□□□ -0.38
RAB3IP-218ENST00000553099 ROCK2O75116 1388 aaKnown RBP12.65□□□□□ -0.38
RAB3IP-218ENST00000553099 A2MP01023 1474 aa12.65□□□□□ -0.38
RAB3IP-218ENST00000553099 CNTLNQ9NXG0 1405 aa12.65□□□□□ -0.38
RAB3IP-218ENST00000553099 RAPGEF3O95398 923 aa12.65□□□□□ -0.39
RAB3IP-218ENST00000553099 ATP10AO60312 1499 aa12.64□□□□□ -0.39
RAB3IP-218ENST00000553099 BCORL1Q5H9F3 1711 aa12.64□□□□□ -0.39
RAB3IP-218ENST00000553099 PRDM15P57071 1507 aaPredicted RBP12.64□□□□□ -0.39
RAB3IP-218ENST00000553099 TRPM1Q7Z4N2 1603 aa12.63□□□□□ -0.39
RAB3IP-218ENST00000553099 MROH1Q8NDA8 1641 aa12.63□□□□□ -0.39
RAB3IP-218ENST00000553099 PRAG1Q86YV5 1406 aa12.63□□□□□ -0.39
RAB3IP-218ENST00000553099 MAP3K4Q9Y6R4 1608 aa12.63□□□□□ -0.39
RAB3IP-218ENST00000553099 NEO1Q92859 1461 aa12.63□□□□□ -0.39
RAB3IP-218ENST00000553099 CEP152O94986 1710 aa12.63□□□□□ -0.39
RAB3IP-218ENST00000553099 CFAP65Q6ZU64 1925 aaKnown RBP12.62□□□□□ -0.39
RAB3IP-218ENST00000553099 CCER2I3L3R5 266 aa12.62□□□□□ -0.39
RAB3IP-218ENST00000553099 TSPOAP1O95153 1857 aa12.62□□□□□ -0.39
RAB3IP-218ENST00000553099 TRPM2O94759 1503 aa12.62□□□□□ -0.39
RAB3IP-218ENST00000553099 ABCA6Q8N139 1617 aa12.62□□□□□ -0.39
RAB3IP-218ENST00000553099 VWDEQ8N2E2 1590 aa12.62□□□□□ -0.39
RAB3IP-218ENST00000553099 MLH3Q9UHC1 1453 aa12.61□□□□□ -0.39
RAB3IP-218ENST00000553099 CLTCL1P53675 1640 aa12.61□□□□□ -0.39
RAB3IP-218ENST00000553099 GGT6Q6P531 493 aa12.61□□□□□ -0.39
RAB3IP-218ENST00000553099 ST20-MTHFSA0A0A6YYL1 179 aa12.6□□□□□ -0.39
RAB3IP-218ENST00000553099 FAM69CQ0P6D2 419 aa12.6□□□□□ -0.39
RAB3IP-218ENST00000553099 NBPF1Q3BBV0 1214 aa12.6□□□□□ -0.39
RAB3IP-218ENST00000553099 FRMPD1Q5SYB0 1578 aa12.59□□□□□ -0.39
RAB3IP-218ENST00000553099 RICTORQ6R327 1708 aa12.59□□□□□ -0.39
RAB3IP-218ENST00000553099 PPRC1Q5VV67 1664 aaKnown RBP12.59□□□□□ -0.39
RAB3IP-218ENST00000553099 EFCAB6Q5THR3 1501 aa12.58□□□□□ -0.39
RAB3IP-218ENST00000553099 RNF17Q9BXT8 1623 aaKnown RBP12.58□□□□□ -0.39
RAB3IP-218ENST00000553099 CNGB1Q14028 1251 aaPredicted RBP12.58□□□□□ -0.4
RAB3IP-218ENST00000553099 UGGT1Q9NYU2 1555 aa12.58□□□□□ -0.4
RAB3IP-218ENST00000553099 PTPRTO14522 1441 aa12.58□□□□□ -0.4
RAB3IP-218ENST00000553099 DIP2BQ9P265 1576 aa12.57□□□□□ -0.4
RAB3IP-218ENST00000553099 GLI2P10070 1586 aa12.56□□□□□ -0.4
RAB3IP-218ENST00000553099 KIF1BO60333 1816 aa12.56□□□□□ -0.4
RAB3IP-218ENST00000553099 DIP2CQ9Y2E4 1556 aa12.56□□□□□ -0.4
RAB3IP-218ENST00000553099 PRKRIP1Q9H875 184 aaPredicted RBP12.54□□□□□ -0.4
RAB3IP-218ENST00000553099 WASHC2CQ9Y4E1 1318 aa12.54□□□□□ -0.4
RAB3IP-218ENST00000553099 MADDQ8WXG6 1647 aa12.54□□□□□ -0.4
RAB3IP-218ENST00000553099 YEATS2Q9ULM3 1422 aa12.53□□□□□ -0.4
RAB3IP-218ENST00000553099 CHGAP10645 457 aaKnown RBP12.53□□□□□ -0.4
RAB3IP-218ENST00000553099 ARID4BQ4LE39 1312 aaPredicted RBP12.53□□□□□ -0.4
RAB3IP-218ENST00000553099 GPRASP1Q5JY77 1395 aa12.53□□□□□ -0.4
RAB3IP-218ENST00000553099 LMTK2Q8IWU2 1503 aa12.52□□□□□ -0.4
RAB3IP-218ENST00000553099 LAMC1P11047 1609 aa12.52□□□□□ -0.4
RAB3IP-218ENST00000553099 MROH2AA6NES4 1674 aa12.51□□□□□ -0.41
RAB3IP-218ENST00000553099 NPATQ14207 1427 aa12.51□□□□□ -0.41
RAB3IP-218ENST00000553099 ABCC3O15438 1527 aa12.5□□□□□ -0.41
RAB3IP-218ENST00000553099 CAMSAP1Q5T5Y3 1602 aa12.5□□□□□ -0.41
RAB3IP-218ENST00000553099 CCDC184Q52MB2 194 aa12.5□□□□□ -0.41
RAB3IP-218ENST00000553099 MRS2Q9HD23 443 aa12.49□□□□□ -0.41
RAB3IP-218ENST00000553099 KIF13AQ9H1H9 1805 aa12.47□□□□□ -0.41
RAB3IP-218ENST00000553099 HNRNPUQ00839 825 aaKnown RBP eCLIP12.47□□□□□ -0.41
RAB3IP-218ENST00000553099 SIGLEC1Q9BZZ2 1709 aa12.47□□□□□ -0.41
RAB3IP-218ENST00000553099 IFT172Q9UG01 1749 aa12.46□□□□□ -0.41
RAB3IP-218ENST00000553099 FAM9BQ8IZU0 186 aa12.46□□□□□ -0.41
RAB3IP-218ENST00000553099 DISP3Q9P2K9 1392 aa12.46□□□□□ -0.41
RAB3IP-218ENST00000553099 IQGAP1P46940 1657 aa12.46□□□□□ -0.41
RAB3IP-218ENST00000553099 STAC3Q96MF2 364 aa12.46□□□□□ -0.41
RAB3IP-218ENST00000553099 COL17A1Q9UMD9 1497 aaPredicted RBP12.46□□□□□ -0.41
RAB3IP-218ENST00000553099 NEURL4Q96JN8 1562 aa12.46□□□□□ -0.41
RAB3IP-218ENST00000553099 TESK2Q96S53 571 aa12.45□□□□□ -0.42
RAB3IP-218ENST00000553099 ZMYM4Q5VZL5 1548 aa12.45□□□□□ -0.42
RAB3IP-218ENST00000553099 ADGRF5Q8IZF2 1346 aa12.45□□□□□ -0.42
RAB3IP-218ENST00000553099 ADGRB3O60242 1522 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms