RNA–Protein interactions for RNA: ENST00000552610.1

RAB3IP-217, Transcript of RAB3A interacting protein, humanhuman

TSL 2

Gene RAB3IP, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-217ENST00000552610 TESPA1A2RU30 521 aaPredicted RBP12.05□□□□□ -0.48
RAB3IP-217ENST00000552610 ARHGAP33O14559 1287 aa12.05□□□□□ -0.48
RAB3IP-217ENST00000552610 DMRTA1Q5VZB9 504 aa12.05□□□□□ -0.48
RAB3IP-217ENST00000552610 PTPREP23469 700 aa12.02□□□□□ -0.49
RAB3IP-217ENST00000552610 LSM11P83369 360 aaKnown RBP eCLIP12.02□□□□□ -0.49
RAB3IP-217ENST00000552610 TSR1Q2NL82 804 aaKnown RBP12.02□□□□□ -0.49
RAB3IP-217ENST00000552610 MAP3K7O43318 606 aa12□□□□□ -0.49
RAB3IP-217ENST00000552610 COL9A1P20849 921 aa12□□□□□ -0.49
RAB3IP-217ENST00000552610 C6orf132Q5T0Z8 1188 aa12□□□□□ -0.49
RAB3IP-217ENST00000552610 CDHR5Q9HBB8 845 aa11.99□□□□□ -0.49
RAB3IP-217ENST00000552610 PPP1R3GB7ZBB8 358 aa11.97□□□□□ -0.49
RAB3IP-217ENST00000552610 KCNH8Q96L42 1107 aa11.97□□□□□ -0.49
RAB3IP-217ENST00000552610 ANKRD13DQ6ZTN6 518 aa11.96□□□□□ -0.49
RAB3IP-217ENST00000552610 ZBED2Q9BTP6 218 aa11.94□□□□□ -0.5
RAB3IP-217ENST00000552610 RBM26Q5T8P6 1007 aaKnown RBP11.93□□□□□ -0.5
RAB3IP-217ENST00000552610 ADGRD1Q6QNK2 874 aa11.93□□□□□ -0.5
RAB3IP-217ENST00000552610 PROX2Q3B8N5 592 aa11.91□□□□□ -0.5
RAB3IP-217ENST00000552610 VPS9D1Q9Y2B5 631 aa11.91□□□□□ -0.5
RAB3IP-217ENST00000552610 TK2O00142 265 aa11.9□□□□□ -0.5
RAB3IP-217ENST00000552610 SMYD5Q6GMV2 418 aa11.9□□□□□ -0.5
RAB3IP-217ENST00000552610 SPNS2Q8IVW8 549 aa11.9□□□□□ -0.5
RAB3IP-217ENST00000552610 SLC4A5Q9BY07 1137 aa11.9□□□□□ -0.5
RAB3IP-217ENST00000552610 NPDC1Q9NQX5 325 aaPredicted RBP11.89□□□□□ -0.51
RAB3IP-217ENST00000552610 HRO43593 1189 aa11.88□□□□□ -0.51
RAB3IP-217ENST00000552610 NUTM2FA1L443 756 aa11.86□□□□□ -0.51
RAB3IP-217ENST00000552610 TRIM6-TRIM34B2RNG4 842 aa11.84□□□□□ -0.51
RAB3IP-217ENST00000552610 PTGDRQ13258 359 aa11.84□□□□□ -0.51
RAB3IP-217ENST00000552610 TSKSQ9UJT2 592 aa11.84□□□□□ -0.51
RAB3IP-217ENST00000552610 BHMG1C9JSJ3 638 aaPredicted RBP11.83□□□□□ -0.52
RAB3IP-217ENST00000552610 GPR37O15354 613 aa11.83□□□□□ -0.52
RAB3IP-217ENST00000552610 CERKQ8TCT0 537 aa11.83□□□□□ -0.52
RAB3IP-217ENST00000552610 CDCA7LQ96GN5 454 aa11.83□□□□□ -0.52
RAB3IP-217ENST00000552610 FAM198AQ9UFP1 575 aa11.83□□□□□ -0.52
RAB3IP-217ENST00000552610 PRSS12P56730 875 aa11.82□□□□□ -0.52
RAB3IP-217ENST00000552610 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.81□□□□□ -0.52
RAB3IP-217ENST00000552610 PADI6Q6TGC4 694 aa11.8□□□□□ -0.52
RAB3IP-217ENST00000552610 RABGEF1Q9UJ41 708 aa11.8□□□□□ -0.52
RAB3IP-217ENST00000552610 TULP1O00294 542 aaPredicted RBP11.79□□□□□ -0.52
RAB3IP-217ENST00000552610 ONECUT3O60422 494 aaPredicted RBP11.79□□□□□ -0.52
RAB3IP-217ENST00000552610 MMRN1Q13201 1228 aa11.79□□□□□ -0.52
RAB3IP-217ENST00000552610 GPIHBP1Q8IV16 184 aa11.79□□□□□ -0.52
RAB3IP-217ENST00000552610 KIAA1468Q9P260 1216 aa11.79□□□□□ -0.52
RAB3IP-217ENST00000552610 RBM27Q9P2N5 1060 aaKnown RBP11.79□□□□□ -0.52
RAB3IP-217ENST00000552610 C3orf80F5H4A9 247 aa11.78□□□□□ -0.52
RAB3IP-217ENST00000552610 FCHSD2O94868 740 aa11.78□□□□□ -0.52
RAB3IP-217ENST00000552610 LMOD2Q6P5Q4 547 aa11.78□□□□□ -0.52
RAB3IP-217ENST00000552610 TTC13Q8NBP0 860 aa11.78□□□□□ -0.52
RAB3IP-217ENST00000552610 MYT1LQ9UL68 1186 aa11.77□□□□□ -0.53
RAB3IP-217ENST00000552610 BCANQ96GW7 911 aa11.76□□□□□ -0.53
RAB3IP-217ENST00000552610 PLSCR2Q9NRY7 297 aa11.76□□□□□ -0.53
RAB3IP-217ENST00000552610 NBPF3Q9H094 633 aa11.75□□□□□ -0.53
RAB3IP-217ENST00000552610 SEPT9Q9UHD8 586 aaPredicted RBP11.75□□□□□ -0.53
RAB3IP-217ENST00000552610 FECHP22830 423 aa11.73□□□□□ -0.53
RAB3IP-217ENST00000552610 HIC1Q14526 733 aa11.73□□□□□ -0.53
RAB3IP-217ENST00000552610 PACS2Q86VP3 889 aa11.73□□□□□ -0.53
RAB3IP-217ENST00000552610 SMAPO00193 183 aa11.72□□□□□ -0.53
RAB3IP-217ENST00000552610 MRPL50Q8N5N7 158 aaKnown RBP11.72□□□□□ -0.53
RAB3IP-217ENST00000552610 RNF166Q96A37 237 aaPredicted RBP11.71□□□□□ -0.53
RAB3IP-217ENST00000552610 STAC3Q96MF2 364 aa11.71□□□□□ -0.53
RAB3IP-217ENST00000552610 NBPF26B4DH59 902 aa11.7□□□□□ -0.54
RAB3IP-217ENST00000552610 GNPATO15228 680 aa11.7□□□□□ -0.54
RAB3IP-217ENST00000552610 NUDT18Q6ZVK8 323 aa11.7□□□□□ -0.54
RAB3IP-217ENST00000552610 TATDN2Q93075 761 aa11.7□□□□□ -0.54
RAB3IP-217ENST00000552610 PNMA3Q9UL41 463 aa11.7□□□□□ -0.54
RAB3IP-217ENST00000552610 FAM161AQ3B820 660 aa11.68□□□□□ -0.54
RAB3IP-217ENST00000552610 LAPTM4BQ86VI4 370 aa11.68□□□□□ -0.54
RAB3IP-217ENST00000552610 ADGRG1Q9Y653 693 aa11.67□□□□□ -0.54
RAB3IP-217ENST00000552610 FAM98CQ17RN3 349 aaKnown RBP11.66□□□□□ -0.54
RAB3IP-217ENST00000552610 KCTD12Q96CX2 325 aaKnown RBP11.66□□□□□ -0.54
RAB3IP-217ENST00000552610 ZFRQ96KR1 1074 aaKnown RBP11.65□□□□□ -0.54
RAB3IP-217ENST00000552610 ZC3H15Q8WU90 426 aaKnown RBP11.64□□□□□ -0.55
RAB3IP-217ENST00000552610 EYA1Q99502 592 aa11.64□□□□□ -0.55
RAB3IP-217ENST00000552610 GOLGA8CPA6NN73 597 aa11.63□□□□□ -0.55
RAB3IP-217ENST00000552610 WNT2BQ93097 391 aa11.63□□□□□ -0.55
RAB3IP-217ENST00000552610 THSD4Q6ZMP0 1018 aa11.6□□□□□ -0.55
RAB3IP-217ENST00000552610 ZMYND10O75800 440 aa11.59□□□□□ -0.55
RAB3IP-217ENST00000552610 BCAMP50895 628 aa11.59□□□□□ -0.55
RAB3IP-217ENST00000552610 MAP2K5Q13163 448 aa11.59□□□□□ -0.55
RAB3IP-217ENST00000552610 ANKK1Q8NFD2 765 aa11.59□□□□□ -0.55
RAB3IP-217ENST00000552610 PXYLP1Q8TE99 480 aa11.59□□□□□ -0.55
RAB3IP-217ENST00000552610 SAMD7Q7Z3H4 446 aa11.58□□□□□ -0.56
RAB3IP-217ENST00000552610 RBM46Q8TBY0 533 aaKnown RBP11.58□□□□□ -0.56
RAB3IP-217ENST00000552610 METTL3Q86U44 580 aaKnown RBP11.57□□□□□ -0.56
RAB3IP-217ENST00000552610 SOWAHBA6NEL2 793 aa11.56□□□□□ -0.56
RAB3IP-217ENST00000552610 BARGINQ6ZT62 677 aa11.56□□□□□ -0.56
RAB3IP-217ENST00000552610 OATP04181 439 aa11.55□□□□□ -0.56
RAB3IP-217ENST00000552610 PHOX2BQ99453 314 aa11.55□□□□□ -0.56
RAB3IP-217ENST00000552610 RCCD1A6NED2 376 aa11.54□□□□□ -0.56
RAB3IP-217ENST00000552610 DNAJB2P25686 324 aa11.54□□□□□ -0.56
RAB3IP-217ENST00000552610 SWT1Q5T5J6 900 aaKnown RBP11.54□□□□□ -0.56
RAB3IP-217ENST00000552610 CCDC102AQ96A19 550 aa11.54□□□□□ -0.56
RAB3IP-217ENST00000552610 LRCH3Q96II8 777 aa11.54□□□□□ -0.56
RAB3IP-217ENST00000552610 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.54□□□□□ -0.56
RAB3IP-217ENST00000552610 IRF6O14896 467 aa11.53□□□□□ -0.56
RAB3IP-217ENST00000552610 PTPN5P54829 565 aa11.53□□□□□ -0.56
RAB3IP-217ENST00000552610 NLRP7Q8WX94 980 aa11.53□□□□□ -0.56
RAB3IP-217ENST00000552610 MINK1Q8N4C8 1332 aaPredicted RBP11.53□□□□□ -0.56
RAB3IP-217ENST00000552610 TMEM134Q9H6X4 195 aa11.52□□□□□ -0.57
RAB3IP-217ENST00000552610 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.51□□□□□ -0.57
RAB3IP-217ENST00000552610 HCSTQ9UBK5 93 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms