RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 ADAM33Q9BZ11 813 aa8.12□□□□□ -1.11
USP44-208ENST00000552440 BHMG1C9JSJ3 638 aaPredicted RBP8.11□□□□□ -1.11
USP44-208ENST00000552440 ONECUT3O60422 494 aaPredicted RBP8.1□□□□□ -1.11
USP44-208ENST00000552440 PRKCSHP14314 528 aaPredicted RBP8.1□□□□□ -1.11
USP44-208ENST00000552440 CADPS2Q86UW7 1296 aa8.1□□□□□ -1.11
USP44-208ENST00000552440 PCDHGA10Q9Y5H3 936 aa8.1□□□□□ -1.11
USP44-208ENST00000552440 BCANQ96GW7 911 aa8.09□□□□□ -1.11
USP44-208ENST00000552440 RABGEF1Q9UJ41 708 aa8.09□□□□□ -1.11
USP44-208ENST00000552440 LAPTM4BQ86VI4 370 aa8.08□□□□□ -1.12
USP44-208ENST00000552440 SPDYE16A6NNV3 312 aaPredicted RBP8.08□□□□□ -1.12
USP44-208ENST00000552440 WNT2BQ93097 391 aa8.08□□□□□ -1.12
USP44-208ENST00000552440 WDR70Q9NW82 654 aa8.07□□□□□ -1.12
USP44-208ENST00000552440 THSD4Q6ZMP0 1018 aa8.06□□□□□ -1.12
USP44-208ENST00000552440 VSIG10Q8N0Z9 540 aa8.06□□□□□ -1.12
USP44-208ENST00000552440 IFFO2Q5TF58 517 aa8.06□□□□□ -1.12
USP44-208ENST00000552440 DPYSL4O14531 572 aa8.05□□□□□ -1.12
USP44-208ENST00000552440 PTPN5P54829 565 aa8.05□□□□□ -1.12
USP44-208ENST00000552440 ANKK1Q8NFD2 765 aa8.05□□□□□ -1.12
USP44-208ENST00000552440 RGS20O76081 388 aa8.04□□□□□ -1.12
USP44-208ENST00000552440 NYAP1Q6ZVC0 841 aa8.03□□□□□ -1.12
USP44-208ENST00000552440 C6orf132Q5T0Z8 1188 aa8.03□□□□□ -1.12
USP44-208ENST00000552440 E2F4Q16254 413 aa8.01□□□□□ -1.13
USP44-208ENST00000552440 ARIH1Q9Y4X5 557 aaPredicted RBP8.01□□□□□ -1.13
USP44-208ENST00000552440 PDIA6Q15084 440 aa8.01□□□□□ -1.13
USP44-208ENST00000552440 CERKQ8TCT0 537 aa8□□□□□ -1.13
USP44-208ENST00000552440 COL9A1P20849 921 aa7.99□□□□□ -1.13
USP44-208ENST00000552440 PACS2Q86VP3 889 aa7.99□□□□□ -1.13
USP44-208ENST00000552440 KIAA1468Q9P260 1216 aa7.99□□□□□ -1.13
USP44-208ENST00000552440 PAXIP1Q6ZW49 1069 aaPredicted RBP7.99□□□□□ -1.13
USP44-208ENST00000552440 TRIM6-TRIM34B2RNG4 842 aa7.98□□□□□ -1.13
USP44-208ENST00000552440 CFAP44Q96MT7 982 aa7.98□□□□□ -1.13
USP44-208ENST00000552440 PROX2Q3B8N5 592 aa7.97□□□□□ -1.13
USP44-208ENST00000552440 DDX12PQ92771 950 aa7.97□□□□□ -1.13
USP44-208ENST00000552440 SOWAHBA6NEL2 793 aa7.96□□□□□ -1.13
USP44-208ENST00000552440 MAP3K7O43318 606 aa7.96□□□□□ -1.13
USP44-208ENST00000552440 EN1Q05925 392 aaPredicted RBP7.96□□□□□ -1.13
USP44-208ENST00000552440 NBR1Q14596 966 aa7.96□□□□□ -1.13
USP44-208ENST00000552440 FAM98CQ17RN3 349 aaKnown RBP7.96□□□□□ -1.13
USP44-208ENST00000552440 KDM2AQ9Y2K7 1162 aa7.96□□□□□ -1.13
USP44-208ENST00000552440 RBM33Q96EV2 1170 aaKnown RBP7.96□□□□□ -1.14
USP44-208ENST00000552440 ZFRQ96KR1 1074 aaKnown RBP7.96□□□□□ -1.14
USP44-208ENST00000552440 ARXQ96QS3 562 aa7.95□□□□□ -1.14
USP44-208ENST00000552440 LRCH3Q96II8 777 aa7.92□□□□□ -1.14
USP44-208ENST00000552440 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.92□□□□□ -1.14
USP44-208ENST00000552440 A0A0G2JS52 829 aa7.91□□□□□ -1.14
USP44-208ENST00000552440 ITGBL1O95965 494 aaPredicted RBP7.91□□□□□ -1.14
USP44-208ENST00000552440 HDGFP51858 240 aaKnown RBP7.91□□□□□ -1.14
USP44-208ENST00000552440 TSR3Q9UJK0 312 aaKnown RBP7.91□□□□□ -1.14
USP44-208ENST00000552440 NECTIN2Q92692 538 aa7.9□□□□□ -1.14
USP44-208ENST00000552440 PRSS12P56730 875 aa7.89□□□□□ -1.15
USP44-208ENST00000552440 RBM27Q9P2N5 1060 aaKnown RBP7.89□□□□□ -1.15
USP44-208ENST00000552440 NBPF26B4DH59 902 aa7.89□□□□□ -1.15
USP44-208ENST00000552440 BCAMP50895 628 aa7.89□□□□□ -1.15
USP44-208ENST00000552440 SEPT9Q9UHD8 586 aaPredicted RBP7.89□□□□□ -1.15
USP44-208ENST00000552440 GRXCR2A6NFK2 248 aa7.88□□□□□ -1.15
USP44-208ENST00000552440 CDCA7LQ96GN5 454 aa7.88□□□□□ -1.15
USP44-208ENST00000552440 KCNC4Q03721 635 aa7.87□□□□□ -1.15
USP44-208ENST00000552440 TPRNQ4KMQ1 711 aa7.87□□□□□ -1.15
USP44-208ENST00000552440 TIMELESSQ9UNS1 1208 aa7.87□□□□□ -1.15
USP44-208ENST00000552440 SLC4A3P48751 1232 aa7.86□□□□□ -1.15
USP44-208ENST00000552440 PPP4CP60510 307 aa7.86□□□□□ -1.15
USP44-208ENST00000552440 TSR1Q2NL82 804 aaKnown RBP7.86□□□□□ -1.15
USP44-208ENST00000552440 WBP1LQ9NX94 342 aa7.85□□□□□ -1.15
USP44-208ENST00000552440 TSKSQ9UJT2 592 aa7.85□□□□□ -1.15
USP44-208ENST00000552440 HPS5Q9UPZ3 1129 aa7.85□□□□□ -1.15
USP44-208ENST00000552440 ARHGEF1Q92888 912 aaKnown RBP7.85□□□□□ -1.15
USP44-208ENST00000552440 TATDN2Q93075 761 aa7.83□□□□□ -1.16
USP44-208ENST00000552440 OSBPP22059 807 aa7.82□□□□□ -1.16
USP44-208ENST00000552440 IRX2Q9BZI1 471 aaPredicted RBP7.82□□□□□ -1.16
USP44-208ENST00000552440 TSHZ2Q9NRE2 1034 aa7.82□□□□□ -1.16
USP44-208ENST00000552440 PNMA3Q9UL41 463 aa7.81□□□□□ -1.16
USP44-208ENST00000552440 P3H3Q8IVL6 736 aa7.8□□□□□ -1.16
USP44-208ENST00000552440 SAMD7Q7Z3H4 446 aa7.79□□□□□ -1.16
USP44-208ENST00000552440 TULP1O00294 542 aaPredicted RBP7.78□□□□□ -1.16
USP44-208ENST00000552440 SLF2Q8IX21 1173 aa7.78□□□□□ -1.16
USP44-208ENST00000552440 PRR14Q9BWN1 585 aa7.78□□□□□ -1.16
USP44-208ENST00000552440 NUDT18Q6ZVK8 323 aa7.77□□□□□ -1.17
USP44-208ENST00000552440 IL21Q9HBE4 155 aa7.76□□□□□ -1.17
USP44-208ENST00000552440 LAPTM4AQ15012 233 aa7.75□□□□□ -1.17
USP44-208ENST00000552440 TTC13Q8NBP0 860 aa7.75□□□□□ -1.17
USP44-208ENST00000552440 SMAPO00193 183 aa7.75□□□□□ -1.17
USP44-208ENST00000552440 PRIM1P49642 420 aaKnown RBP7.74□□□□□ -1.17
USP44-208ENST00000552440 FAM198AQ9UFP1 575 aa7.74□□□□□ -1.17
USP44-208ENST00000552440 CDHR5Q9HBB8 845 aa7.73□□□□□ -1.17
USP44-208ENST00000552440 GGCXP38435 758 aa7.72□□□□□ -1.17
USP44-208ENST00000552440 TJAP1Q5JTD0 557 aa7.72□□□□□ -1.17
USP44-208ENST00000552440 PADI6Q6TGC4 694 aa7.72□□□□□ -1.17
USP44-208ENST00000552440 NPDC1Q9NQX5 325 aaPredicted RBP7.72□□□□□ -1.17
USP44-208ENST00000552440 RNF40O75150 1001 aa7.71□□□□□ -1.17
USP44-208ENST00000552440 HOMEZQ8IX15 550 aa7.71□□□□□ -1.17
USP44-208ENST00000552440 RBM46Q8TBY0 533 aaKnown RBP7.71□□□□□ -1.17
USP44-208ENST00000552440 MTRQ99707 1265 aa7.7□□□□□ -1.18
USP44-208ENST00000552440 SMYD5Q6GMV2 418 aa7.69□□□□□ -1.18
USP44-208ENST00000552440 KCNV2Q8TDN2 545 aa7.69□□□□□ -1.18
USP44-208ENST00000552440 DNAJB2P25686 324 aa7.68□□□□□ -1.18
USP44-208ENST00000552440 SWT1Q5T5J6 900 aaKnown RBP7.68□□□□□ -1.18
USP44-208ENST00000552440 EYA1Q99502 592 aa7.68□□□□□ -1.18
USP44-208ENST00000552440 PTGDRQ13258 359 aa7.68□□□□□ -1.18
USP44-208ENST00000552440 FCHSD2O94868 740 aa7.67□□□□□ -1.18
USP44-208ENST00000552440 V9GY48 417 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms