RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 PTPRKQ15262 1439 aa16.8■□□□□ 0.28
TMEM116-215ENST00000552374 CLTCQ00610 1675 aaKnown RBP16.8■□□□□ 0.28
TMEM116-215ENST00000552374 TCOF1Q13428 1488 aaKnown RBP16.79■□□□□ 0.28
TMEM116-215ENST00000552374 PREX1Q8TCU6 1659 aa16.79■□□□□ 0.28
TMEM116-215ENST00000552374 MAST1Q9Y2H9 1570 aa16.78■□□□□ 0.28
TMEM116-215ENST00000552374 ANKRD30AQ9BXX3 1397 aa16.78■□□□□ 0.28
TMEM116-215ENST00000552374 ITGAEP38570 1179 aa16.76■□□□□ 0.27
TMEM116-215ENST00000552374 NCKAP5LQ9HCH0 1330 aa16.75■□□□□ 0.27
TMEM116-215ENST00000552374 MROH2AA6NES4 1674 aa16.75■□□□□ 0.27
TMEM116-215ENST00000552374 DUOX2Q9NRD8 1548 aa16.75■□□□□ 0.27
TMEM116-215ENST00000552374 SHANK2Q9UPX8 1470 aa16.74■□□□□ 0.27
TMEM116-215ENST00000552374 TNRQ92752 1358 aa16.74■□□□□ 0.27
TMEM116-215ENST00000552374 KDM5DQ9BY66 1539 aa16.73■□□□□ 0.27
TMEM116-215ENST00000552374 NCOA1Q15788 1441 aa16.73■□□□□ 0.27
TMEM116-215ENST00000552374 CERKQ8TCT0 537 aa16.71■□□□□ 0.27
TMEM116-215ENST00000552374 FBXO41Q8TF61 875 aa16.71■□□□□ 0.27
TMEM116-215ENST00000552374 PZPP20742 1482 aa16.71■□□□□ 0.26
TMEM116-215ENST00000552374 PKD2Q13563 968 aa16.7■□□□□ 0.26
TMEM116-215ENST00000552374 DNMT1P26358 1616 aaKnown RBP16.7■□□□□ 0.26
TMEM116-215ENST00000552374 ERBINQ96RT1 1412 aa16.7■□□□□ 0.26
TMEM116-215ENST00000552374 KANK1Q14678 1352 aa16.69■□□□□ 0.26
TMEM116-215ENST00000552374 THEMISQ8N1K5 641 aaPredicted RBP16.69■□□□□ 0.26
TMEM116-215ENST00000552374 CAMSAP1Q5T5Y3 1602 aa16.68■□□□□ 0.26
TMEM116-215ENST00000552374 PTPRTO14522 1441 aa16.68■□□□□ 0.26
TMEM116-215ENST00000552374 ABCC3O15438 1527 aa16.67■□□□□ 0.26
TMEM116-215ENST00000552374 FAM135AQ9P2D6 1515 aa16.67■□□□□ 0.26
TMEM116-215ENST00000552374 A2ML1A8K2U0 1454 aa16.67■□□□□ 0.26
TMEM116-215ENST00000552374 STRCQ7RTU9 1775 aa16.66■□□□□ 0.26
TMEM116-215ENST00000552374 RNF17Q9BXT8 1623 aaKnown RBP16.65■□□□□ 0.26
TMEM116-215ENST00000552374 ANKLE2Q86XL3 938 aa16.65■□□□□ 0.26
TMEM116-215ENST00000552374 EIF2AK4Q9P2K8 1649 aaKnown RBP16.65■□□□□ 0.26
TMEM116-215ENST00000552374 CEP170BQ9Y4F5 1589 aaPredicted RBP16.64■□□□□ 0.26
TMEM116-215ENST00000552374 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.64■□□□□ 0.25
TMEM116-215ENST00000552374 CROCC2H7BZ55 1655 aa16.64■□□□□ 0.25
TMEM116-215ENST00000552374 ANKRD50Q9ULJ7 1429 aa16.64■□□□□ 0.25
TMEM116-215ENST00000552374 MYO3AQ8NEV4 1616 aa16.63■□□□□ 0.25
TMEM116-215ENST00000552374 ADGRL2O95490 1459 aa16.63■□□□□ 0.25
TMEM116-215ENST00000552374 MROH1Q8NDA8 1641 aa16.62■□□□□ 0.25
TMEM116-215ENST00000552374 STAG3Q9UJ98 1225 aa16.61■□□□□ 0.25
TMEM116-215ENST00000552374 PLA2R1Q13018 1463 aa16.61■□□□□ 0.25
TMEM116-215ENST00000552374 NLRP1Q9C000 1473 aa16.61■□□□□ 0.25
TMEM116-215ENST00000552374 ERVK-7P63135 1459 aa16.6■□□□□ 0.25
TMEM116-215ENST00000552374 ZNF335Q9H4Z2 1342 aaPredicted RBP16.59■□□□□ 0.25
TMEM116-215ENST00000552374 ARHGAP31Q2M1Z3 1444 aa16.59■□□□□ 0.25
TMEM116-215ENST00000552374 ROCK1Q13464 1354 aa16.59■□□□□ 0.25
TMEM116-215ENST00000552374 UGGT1Q9NYU2 1555 aa16.57■□□□□ 0.24
TMEM116-215ENST00000552374 IDI1Q13907 227 aa16.57■□□□□ 0.24
TMEM116-215ENST00000552374 PRDM15P57071 1507 aaPredicted RBP16.57■□□□□ 0.24
TMEM116-215ENST00000552374 SPATA31D1Q6ZQQ2 1576 aa16.56■□□□□ 0.24
TMEM116-215ENST00000552374 ZNF142P52746 1687 aaPredicted RBP16.56■□□□□ 0.24
TMEM116-215ENST00000552374 ZC3H13Q5T200 1668 aaKnown RBP16.56■□□□□ 0.24
TMEM116-215ENST00000552374 CEP152O94986 1710 aa16.55■□□□□ 0.24
TMEM116-215ENST00000552374 TXNDC2Q86VQ3 553 aa16.55■□□□□ 0.24
TMEM116-215ENST00000552374 CFAP65Q6ZU64 1925 aaKnown RBP16.54■□□□□ 0.24
TMEM116-215ENST00000552374 NUP155O75694 1391 aa16.53■□□□□ 0.24
TMEM116-215ENST00000552374 EID1Q9Y6B2 187 aa16.53■□□□□ 0.24
TMEM116-215ENST00000552374 DEPDC5O75140 1603 aa16.52■□□□□ 0.23
TMEM116-215ENST00000552374 LTKP29376 864 aa16.52■□□□□ 0.23
TMEM116-215ENST00000552374 SLC52A1Q9NWF4 448 aa16.52■□□□□ 0.23
TMEM116-215ENST00000552374 RRBP1Q9P2E9 1410 aaKnown RBP16.52■□□□□ 0.23
TMEM116-215ENST00000552374 LMTK2Q8IWU2 1503 aa16.51■□□□□ 0.23
TMEM116-215ENST00000552374 VWDEQ8N2E2 1590 aa16.5■□□□□ 0.23
TMEM116-215ENST00000552374 NPHP4O75161 1426 aaPredicted RBP16.5■□□□□ 0.23
TMEM116-215ENST00000552374 LTBP4Q8N2S1 1624 aa16.49■□□□□ 0.23
TMEM116-215ENST00000552374 CHGAP10645 457 aaKnown RBP16.49■□□□□ 0.23
TMEM116-215ENST00000552374 NOS1P29475 1434 aa16.48■□□□□ 0.23
TMEM116-215ENST00000552374 UBAP1LF5GYI3 381 aa16.45■□□□□ 0.22
TMEM116-215ENST00000552374 BCANQ96GW7 911 aa16.45■□□□□ 0.22
TMEM116-215ENST00000552374 SENP3Q9H4L4 574 aaPredicted RBP16.45■□□□□ 0.22
TMEM116-215ENST00000552374 TMEM2Q9UHN6 1383 aa16.45■□□□□ 0.22
TMEM116-215ENST00000552374 TRIM52Q96A61 297 aa16.45■□□□□ 0.22
TMEM116-215ENST00000552374 MED14O60244 1454 aa16.44■□□□□ 0.22
TMEM116-215ENST00000552374 EFCAB6Q5THR3 1501 aa16.44■□□□□ 0.22
TMEM116-215ENST00000552374 SCAF11Q99590 1463 aaKnown RBP16.44■□□□□ 0.22
TMEM116-215ENST00000552374 NEURL4Q96JN8 1562 aa16.43■□□□□ 0.22
TMEM116-215ENST00000552374 RPRD2Q5VT52 1461 aaKnown RBP16.43■□□□□ 0.22
TMEM116-215ENST00000552374 HDGFP51858 240 aaKnown RBP16.41■□□□□ 0.22
TMEM116-215ENST00000552374 SLC26A8Q96RN1 970 aa16.41■□□□□ 0.22
TMEM116-215ENST00000552374 SYNMO15061 1565 aa16.41■□□□□ 0.22
TMEM116-215ENST00000552374 ARHGAP23Q9P227 1491 aa16.4■□□□□ 0.22
TMEM116-215ENST00000552374 NAIPQ13075 1403 aa16.4■□□□□ 0.22
TMEM116-215ENST00000552374 UBR1Q8IWV7 1749 aa16.4■□□□□ 0.22
TMEM116-215ENST00000552374 PIK3C2BO00750 1634 aa16.39■□□□□ 0.21
TMEM116-215ENST00000552374 PPP1R15AO75807 674 aaPredicted RBP16.39■□□□□ 0.21
TMEM116-215ENST00000552374 NUTM2DQ5VT03 806 aaPredicted RBP16.39■□□□□ 0.21
TMEM116-215ENST00000552374 SLIT1O75093 1534 aa16.39■□□□□ 0.21
TMEM116-215ENST00000552374 SCAF1Q9H7N4 1312 aaKnown RBP16.38■□□□□ 0.21
TMEM116-215ENST00000552374 UNC13BO14795 1591 aa16.38■□□□□ 0.21
TMEM116-215ENST00000552374 POLR1AO95602 1720 aaPredicted RBP16.38■□□□□ 0.21
TMEM116-215ENST00000552374 TOM1O60784 492 aa16.37■□□□□ 0.21
TMEM116-215ENST00000552374 PIP4K2BP78356 416 aa16.37■□□□□ 0.21
TMEM116-215ENST00000552374 IQSEC2Q5JU85 1478 aa16.37■□□□□ 0.21
TMEM116-215ENST00000552374 TET3O43151 1660 aa16.37■□□□□ 0.21
TMEM116-215ENST00000552374 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.36■□□□□ 0.21
TMEM116-215ENST00000552374 SLC4A1APQ9BWU0 796 aaKnown RBP16.36■□□□□ 0.21
TMEM116-215ENST00000552374 HFM1A2PYH4 1435 aa16.35■□□□□ 0.21
TMEM116-215ENST00000552374 IQGAP1P46940 1657 aa16.35■□□□□ 0.21
TMEM116-215ENST00000552374 CPS1P31327 1500 aa16.35■□□□□ 0.21
TMEM116-215ENST00000552374 RIMS2Q9UQ26 1411 aa16.33■□□□□ 0.2
TMEM116-215ENST00000552374 ADGRB3O60242 1522 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms