RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 ITGBL1O95965 494 aaPredicted RBP10.6□□□□□ -0.71
HCFC2-206ENST00000552343 BCAMP50895 628 aa10.59□□□□□ -0.71
HCFC2-206ENST00000552343 TYW1BQ6NUM6 668 aa10.57□□□□□ -0.72
HCFC2-206ENST00000552343 SOWAHBA6NEL2 793 aa10.56□□□□□ -0.72
HCFC2-206ENST00000552343 PHF14O94880 888 aa10.56□□□□□ -0.72
HCFC2-206ENST00000552343 LAPTM4BQ86VI4 370 aa10.56□□□□□ -0.72
HCFC2-206ENST00000552343 RTN4Q9NQC3 1192 aaKnown RBP10.56□□□□□ -0.72
HCFC2-206ENST00000552343 FBXW7Q969H0 707 aa10.55□□□□□ -0.72
HCFC2-206ENST00000552343 KIAA1468Q9P260 1216 aa10.55□□□□□ -0.72
HCFC2-206ENST00000552343 ZFRQ96KR1 1074 aaKnown RBP10.54□□□□□ -0.72
HCFC2-206ENST00000552343 WBP1LQ9NX94 342 aa10.52□□□□□ -0.73
HCFC2-206ENST00000552343 NYAP1Q6ZVC0 841 aa10.51□□□□□ -0.73
HCFC2-206ENST00000552343 CADPS2Q86UW7 1296 aa10.51□□□□□ -0.73
HCFC2-206ENST00000552343 SEPT9Q9UHD8 586 aaPredicted RBP10.51□□□□□ -0.73
HCFC2-206ENST00000552343 ONECUT3O60422 494 aaPredicted RBP10.5□□□□□ -0.73
HCFC2-206ENST00000552343 C6orf132Q5T0Z8 1188 aa10.5□□□□□ -0.73
HCFC2-206ENST00000552343 KCNC4Q03721 635 aa10.49□□□□□ -0.73
HCFC2-206ENST00000552343 Q6ZNB5 142 aa10.49□□□□□ -0.73
HCFC2-206ENST00000552343 EPAS1Q99814 870 aa10.48□□□□□ -0.73
HCFC2-206ENST00000552343 TRIM6-TRIM34B2RNG4 842 aa10.45□□□□□ -0.74
HCFC2-206ENST00000552343 FAM98CQ17RN3 349 aaKnown RBP10.45□□□□□ -0.74
HCFC2-206ENST00000552343 DPYSL4O14531 572 aa10.44□□□□□ -0.74
HCFC2-206ENST00000552343 CAMK2BQ13554 666 aa10.44□□□□□ -0.74
HCFC2-206ENST00000552343 RBM33Q96EV2 1170 aaKnown RBP10.44□□□□□ -0.74
HCFC2-206ENST00000552343 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.43□□□□□ -0.74
HCFC2-206ENST00000552343 TSR3Q9UJK0 312 aaKnown RBP10.43□□□□□ -0.74
HCFC2-206ENST00000552343 HPS5Q9UPZ3 1129 aa10.43□□□□□ -0.74
HCFC2-206ENST00000552343 LRCH3Q96II8 777 aa10.41□□□□□ -0.74
HCFC2-206ENST00000552343 DDX12PQ92771 950 aa10.4□□□□□ -0.74
HCFC2-206ENST00000552343 DCAF8L2P0C7V8 631 aa10.39□□□□□ -0.75
HCFC2-206ENST00000552343 LCE2BO14633 110 aa10.36□□□□□ -0.75
HCFC2-206ENST00000552343 TSKSQ9UJT2 592 aa10.36□□□□□ -0.75
HCFC2-206ENST00000552343 EN1Q05925 392 aaPredicted RBP10.34□□□□□ -0.75
HCFC2-206ENST00000552343 LAPTM4AQ15012 233 aa10.34□□□□□ -0.75
HCFC2-206ENST00000552343 TSR1Q2NL82 804 aaKnown RBP10.34□□□□□ -0.75
HCFC2-206ENST00000552343 PACS2Q86VP3 889 aa10.34□□□□□ -0.75
HCFC2-206ENST00000552343 PPP4CP60510 307 aa10.33□□□□□ -0.76
HCFC2-206ENST00000552343 NBR1Q14596 966 aa10.33□□□□□ -0.76
HCFC2-206ENST00000552343 MAP3K7O43318 606 aa10.32□□□□□ -0.76
HCFC2-206ENST00000552343 GFRA3O60609 400 aa10.31□□□□□ -0.76
HCFC2-206ENST00000552343 TJAP1Q5JTD0 557 aa10.31□□□□□ -0.76
HCFC2-206ENST00000552343 SMAPO00193 183 aa10.3□□□□□ -0.76
HCFC2-206ENST00000552343 TRAF7Q6Q0C0 670 aa10.29□□□□□ -0.76
HCFC2-206ENST00000552343 SAMD7Q7Z3H4 446 aa10.29□□□□□ -0.76
HCFC2-206ENST00000552343 CDCA7LQ96GN5 454 aa10.28□□□□□ -0.76
HCFC2-206ENST00000552343 FAM198AQ9UFP1 575 aa10.28□□□□□ -0.76
HCFC2-206ENST00000552343 PDIA6Q15084 440 aa10.27□□□□□ -0.77
HCFC2-206ENST00000552343 PRKD2Q9BZL6 878 aa10.27□□□□□ -0.77
HCFC2-206ENST00000552343 SLC24A1O60721 1099 aa10.26□□□□□ -0.77
HCFC2-206ENST00000552343 PRSS12P56730 875 aa10.26□□□□□ -0.77
HCFC2-206ENST00000552343 MTRQ99707 1265 aa10.26□□□□□ -0.77
HCFC2-206ENST00000552343 C3orf80F5H4A9 247 aa10.25□□□□□ -0.77
HCFC2-206ENST00000552343 PPP1R18Q6NYC8 613 aa10.24□□□□□ -0.77
HCFC2-206ENST00000552343 IL21Q9HBE4 155 aa10.24□□□□□ -0.77
HCFC2-206ENST00000552343 SPDYE16A6NNV3 312 aaPredicted RBP10.23□□□□□ -0.77
HCFC2-206ENST00000552343 PRIM1P49642 420 aaKnown RBP10.23□□□□□ -0.77
HCFC2-206ENST00000552343 NRG2O14511 850 aaPredicted RBP10.22□□□□□ -0.77
HCFC2-206ENST00000552343 TATDN2Q93075 761 aa10.22□□□□□ -0.77
HCFC2-206ENST00000552343 ZNF516Q92618 1163 aa10.21□□□□□ -0.77
HCFC2-206ENST00000552343 PNMA3Q9UL41 463 aa10.21□□□□□ -0.77
HCFC2-206ENST00000552343 NBPF26B4DH59 902 aa10.2□□□□□ -0.78
HCFC2-206ENST00000552343 CERKQ8TCT0 537 aa10.2□□□□□ -0.78
HCFC2-206ENST00000552343 V9GY48 417 aaPredicted RBP10.2□□□□□ -0.78
HCFC2-206ENST00000552343 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.19□□□□□ -0.78
HCFC2-206ENST00000552343 GRXCR2A6NFK2 248 aa10.18□□□□□ -0.78
HCFC2-206ENST00000552343 RNF40O75150 1001 aa10.17□□□□□ -0.78
HCFC2-206ENST00000552343 APLP1P51693 650 aa10.17□□□□□ -0.78
HCFC2-206ENST00000552343 NUDT18Q6ZVK8 323 aa10.16□□□□□ -0.78
HCFC2-206ENST00000552343 NKX2-3Q8TAU0 364 aa10.16□□□□□ -0.78
HCFC2-206ENST00000552343 CDHR5Q9HBB8 845 aa10.15□□□□□ -0.78
HCFC2-206ENST00000552343 HDGFP51858 240 aaKnown RBP10.14□□□□□ -0.79
HCFC2-206ENST00000552343 E2F4Q16254 413 aa10.13□□□□□ -0.79
HCFC2-206ENST00000552343 BBXQ8WY36 941 aaPredicted RBP10.13□□□□□ -0.79
HCFC2-206ENST00000552343 OSBPP22059 807 aa10.12□□□□□ -0.79
HCFC2-206ENST00000552343 PDZRN3Q9UPQ7 1066 aa10.12□□□□□ -0.79
HCFC2-206ENST00000552343 RBM27Q9P2N5 1060 aaKnown RBP10.11□□□□□ -0.79
HCFC2-206ENST00000552343 ARIH1Q9Y4X5 557 aaPredicted RBP10.11□□□□□ -0.79
HCFC2-206ENST00000552343 COPS2P61201 443 aa10.1□□□□□ -0.79
HCFC2-206ENST00000552343 SWT1Q5T5J6 900 aaKnown RBP10.09□□□□□ -0.79
HCFC2-206ENST00000552343 ZNF787Q6DD87 383 aa10.09□□□□□ -0.79
HCFC2-206ENST00000552343 GGCXP38435 758 aa10.08□□□□□ -0.8
HCFC2-206ENST00000552343 TTC13Q8NBP0 860 aa10.08□□□□□ -0.8
HCFC2-206ENST00000552343 SLF2Q8IX21 1173 aa10.06□□□□□ -0.8
HCFC2-206ENST00000552343 NECTIN2Q92692 538 aa10.06□□□□□ -0.8
HCFC2-206ENST00000552343 ZNF775Q96BV0 537 aaPredicted RBP10.06□□□□□ -0.8
HCFC2-206ENST00000552343 PADI6Q6TGC4 694 aa10.05□□□□□ -0.8
HCFC2-206ENST00000552343 SPRYD3Q8NCJ5 442 aa10.05□□□□□ -0.8
HCFC2-206ENST00000552343 NPDC1Q9NQX5 325 aaPredicted RBP10.05□□□□□ -0.8
HCFC2-206ENST00000552343 ZPR1O75312 459 aa10.04□□□□□ -0.8
HCFC2-206ENST00000552343 TMUB1Q9BVT8 246 aa10.04□□□□□ -0.8
HCFC2-206ENST00000552343 WDR70Q9NW82 654 aa10.03□□□□□ -0.8
HCFC2-206ENST00000552343 TRIM67Q6ZTA4 783 aa10□□□□□ -0.81
HCFC2-206ENST00000552343 EYA1Q99502 592 aa10□□□□□ -0.81
HCFC2-206ENST00000552343 PCDHB3Q9Y5E6 796 aa9.99□□□□□ -0.81
HCFC2-206ENST00000552343 RNF223E7ERA6 249 aa9.98□□□□□ -0.81
HCFC2-206ENST00000552343 SLC4A3P48751 1232 aa9.98□□□□□ -0.81
HCFC2-206ENST00000552343 EMID1Q96A84 441 aaPredicted RBP9.98□□□□□ -0.81
HCFC2-206ENST00000552343 SLC19A1P41440 591 aa9.97□□□□□ -0.81
HCFC2-206ENST00000552343 BLOC1S3Q6QNY0 202 aa9.97□□□□□ -0.81
HCFC2-206ENST00000552343 PRR14Q9BWN1 585 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms