RNA–Protein interactions for RNA: ENST00000552286.5

MTA1-220, Transcript of metastasis associated 1, humanhuman

TSL 2

Gene MTA1, Length 1,943 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-220ENST00000552286 ZMYM4Q5VZL5 1548 aa28.23■■■□□ 2.11
MTA1-220ENST00000552286 PPP1R15AO75807 674 aaPredicted RBP28.22■■■□□ 2.11
MTA1-220ENST00000552286 DHX29Q7Z478 1369 aaKnown RBP28.21■■■□□ 2.11
MTA1-220ENST00000552286 EIF2AK4Q9P2K8 1649 aaKnown RBP28.21■■■□□ 2.11
MTA1-220ENST00000552286 A2MP01023 1474 aa28.2■■■□□ 2.11
MTA1-220ENST00000552286 DIP2CQ9Y2E4 1556 aa28.2■■■□□ 2.1
MTA1-220ENST00000552286 TONSLQ96HA7 1378 aa28.2■■■□□ 2.1
MTA1-220ENST00000552286 MAGI2Q86UL8 1455 aa28.19■■■□□ 2.1
MTA1-220ENST00000552286 FAM135AQ9P2D6 1515 aa28.18■■■□□ 2.1
MTA1-220ENST00000552286 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.17■■■□□ 2.11e-6■■□□□ 14
MTA1-220ENST00000552286 COL17A1Q9UMD9 1497 aaPredicted RBP28.17■■■□□ 2.1
MTA1-220ENST00000552286 DEPDC5O75140 1603 aa28.17■■■□□ 2.1
MTA1-220ENST00000552286 IQGAP3Q86VI3 1631 aa28.16■■■□□ 2.1
MTA1-220ENST00000552286 FOXD1Q16676 465 aa28.16■■■□□ 2.1
MTA1-220ENST00000552286 YEATS2Q9ULM3 1422 aa28.16■■■□□ 2.1
MTA1-220ENST00000552286 KIF3BO15066 747 aa28.12■■■□□ 2.09
MTA1-220ENST00000552286 MIER1Q8N108 512 aa28.12■■■□□ 2.09
MTA1-220ENST00000552286 PKD2Q13563 968 aa28.11■■■□□ 2.09
MTA1-220ENST00000552286 MROH1Q8NDA8 1641 aa28.08■■■□□ 2.09
MTA1-220ENST00000552286 PRDM15P57071 1507 aaPredicted RBP28.08■■■□□ 2.08
MTA1-220ENST00000552286 RNF17Q9BXT8 1623 aaKnown RBP28.07■■■□□ 2.08
MTA1-220ENST00000552286 BCORL1Q5H9F3 1711 aa28.07■■■□□ 2.08
MTA1-220ENST00000552286 ANKRD30BQ9BXX2 1392 aa28.06■■■□□ 2.08
MTA1-220ENST00000552286 VWDEQ8N2E2 1590 aa28.03■■■□□ 2.08
MTA1-220ENST00000552286 ARHGEF40Q8TER5 1519 aa28.03■■■□□ 2.08
MTA1-220ENST00000552286 KANK1Q14678 1352 aa28.02■■■□□ 2.08
MTA1-220ENST00000552286 ATP10AO60312 1499 aa28.01■■■□□ 2.08
MTA1-220ENST00000552286 REREQ9P2R6 1566 aa27.98■■■□□ 2.07
MTA1-220ENST00000552286 TET3O43151 1660 aa27.98■■■□□ 2.07
MTA1-220ENST00000552286 CEP152O94986 1710 aa27.95■■■□□ 2.07
MTA1-220ENST00000552286 E9PCH4 1651 aa27.95■■■□□ 2.07
MTA1-220ENST00000552286 GGT6Q6P531 493 aa27.95■■■□□ 2.06
MTA1-220ENST00000552286 RPRD2Q5VT52 1461 aaKnown RBP27.94■■■□□ 2.06
MTA1-220ENST00000552286 SIGLEC1Q9BZZ2 1709 aa27.91■■■□□ 2.06
MTA1-220ENST00000552286 LMTK2Q8IWU2 1503 aa27.89■■■□□ 2.06
MTA1-220ENST00000552286 AGLP35573 1532 aa27.89■■■□□ 2.05
MTA1-220ENST00000552286 EFCAB6Q5THR3 1501 aa27.89■■■□□ 2.05
MTA1-220ENST00000552286 ABCC3O15438 1527 aa27.87■■■□□ 2.05
MTA1-220ENST00000552286 L3MBTL2Q969R5 705 aa27.86■■■□□ 2.05
MTA1-220ENST00000552286 PLA2R1Q13018 1463 aa27.85■■■□□ 2.05
MTA1-220ENST00000552286 CENPBP07199 599 aaPredicted RBP27.85■■■□□ 2.05
MTA1-220ENST00000552286 SPHKAPQ2M3C7 1700 aa27.84■■■□□ 2.05
MTA1-220ENST00000552286 ZC3H13Q5T200 1668 aaKnown RBP27.84■■■□□ 2.05
MTA1-220ENST00000552286 WASHC2CQ9Y4E1 1318 aa27.83■■■□□ 2.05
MTA1-220ENST00000552286 CAMSAP1Q5T5Y3 1602 aa27.82■■■□□ 2.04
MTA1-220ENST00000552286 CCDC144AA2RUR9 1427 aa27.82■■■□□ 2.04
MTA1-220ENST00000552286 HIRIP3Q9BW71 556 aaPredicted RBP27.81■■■□□ 2.04
MTA1-220ENST00000552286 TRPM2O94759 1503 aa27.79■■■□□ 2.04
MTA1-220ENST00000552286 PTPRTO14522 1441 aa27.76■■■□□ 2.03
MTA1-220ENST00000552286 NPATQ14207 1427 aa27.75■■■□□ 2.03
MTA1-220ENST00000552286 DDX10Q13206 875 aaKnown RBP27.75■■■□□ 2.03
MTA1-220ENST00000552286 YTHDC1Q96MU7 727 aaKnown RBP27.75■■■□□ 2.03
MTA1-220ENST00000552286 MLECQ14165 292 aa27.72■■■□□ 2.03
MTA1-220ENST00000552286 CFAP65Q6ZU64 1925 aaKnown RBP27.72■■■□□ 2.03
MTA1-220ENST00000552286 CLTCL1P53675 1640 aa27.71■■■□□ 2.03
MTA1-220ENST00000552286 ARID4BQ4LE39 1312 aaPredicted RBP27.71■■■□□ 2.03
MTA1-220ENST00000552286 CLTCQ00610 1675 aaKnown RBP27.69■■■□□ 2.02
MTA1-220ENST00000552286 PPP6R1Q9UPN7 881 aa27.68■■■□□ 2.02
MTA1-220ENST00000552286 ARHGAP31Q2M1Z3 1444 aa27.67■■■□□ 2.02
MTA1-220ENST00000552286 NBPF8Q3BBV2 869 aa27.67■■■□□ 2.02
MTA1-220ENST00000552286 UGGT1Q9NYU2 1555 aa27.66■■■□□ 2.02
MTA1-220ENST00000552286 HSPA5P11021 654 aaKnown RBP27.65■■■□□ 2.02
MTA1-220ENST00000552286 SCAF1Q9H7N4 1312 aaKnown RBP27.64■■■□□ 2.01
MTA1-220ENST00000552286 EIF4G2P78344 907 aaKnown RBP eCLIP27.63■■■□□ 2.01
MTA1-220ENST00000552286 CNTLNQ9NXG0 1405 aa27.62■■■□□ 2.01
MTA1-220ENST00000552286 PREX1Q8TCU6 1659 aa27.6■■■□□ 2.01
MTA1-220ENST00000552286 RGL3Q3MIN7 710 aa27.6■■■□□ 2.01
MTA1-220ENST00000552286 NOS1P29475 1434 aa27.6■■■□□ 2.01
MTA1-220ENST00000552286 KIF1BO60333 1816 aa27.59■■■□□ 2.01
MTA1-220ENST00000552286 SPATA31E1Q6ZUB1 1445 aa27.59■■■□□ 2.01
MTA1-220ENST00000552286 SYNMO15061 1565 aa27.58■■■□□ 2.01
MTA1-220ENST00000552286 ESF1Q9H501 851 aaKnown RBP27.58■■■□□ 2.01
MTA1-220ENST00000552286 DCAF11Q8TEB1 546 aa27.55■■■□□ 2
MTA1-220ENST00000552286 PIK3C2BO00750 1634 aa27.54■■■□□ 2
MTA1-220ENST00000552286 ZNF326Q5BKZ1 582 aaKnown RBP27.53■■■□□ 2
MTA1-220ENST00000552286 MROH2AA6NES4 1674 aa27.52■■■□□ 2
MTA1-220ENST00000552286 NEURL4Q96JN8 1562 aa27.52■■■□□ 2
MTA1-220ENST00000552286 ERVK-7P63135 1459 aa27.52■■■□□ 2
MTA1-220ENST00000552286 KDM2AQ9Y2K7 1162 aa27.52■■■□□ 2
MTA1-220ENST00000552286 UHRF1BP1Q6BDS2 1440 aa27.5■■□□□ 1.99
MTA1-220ENST00000552286 WASHC2AQ641Q2 1341 aa27.5■■□□□ 1.99
MTA1-220ENST00000552286 FBXO31Q5XUX0 539 aaPredicted RBP27.49■■□□□ 1.99
MTA1-220ENST00000552286 FER1L4A9Z1Z3 1794 aa27.49■■□□□ 1.99
MTA1-220ENST00000552286 ADGRB3O60242 1522 aa27.49■■□□□ 1.99
MTA1-220ENST00000552286 ZMYM3Q14202 1370 aa27.48■■□□□ 1.99
MTA1-220ENST00000552286 SPATA31D1Q6ZQQ2 1576 aa27.47■■□□□ 1.99
MTA1-220ENST00000552286 ANP32CO43423 234 aa27.45■■□□□ 1.99
MTA1-220ENST00000552286 CHGAP10645 457 aaKnown RBP27.44■■□□□ 1.98
MTA1-220ENST00000552286 PRAG1Q86YV5 1406 aa27.43■■□□□ 1.98
MTA1-220ENST00000552286 SLC52A1Q9NWF4 448 aa27.43■■□□□ 1.98
MTA1-220ENST00000552286 IFT172Q9UG01 1749 aa27.41■■□□□ 1.98
MTA1-220ENST00000552286 IDI1Q13907 227 aa27.41■■□□□ 1.98
MTA1-220ENST00000552286 RALGAPBQ86X10 1494 aa27.4■■□□□ 1.98
MTA1-220ENST00000552286 TRPM1Q7Z4N2 1603 aa27.38■■□□□ 1.97
MTA1-220ENST00000552286 C11orf95C9JLR9 678 aaPredicted RBP27.38■■□□□ 1.97
MTA1-220ENST00000552286 CCER2I3L3R5 266 aa27.38■■□□□ 1.97
MTA1-220ENST00000552286 CCDC7Q96M83 1385 aa27.38■■□□□ 1.97
MTA1-220ENST00000552286 MADDQ8WXG6 1647 aa27.38■■□□□ 1.97
MTA1-220ENST00000552286 GTF3C3Q9Y5Q9 886 aa27.37■■□□□ 1.97
MTA1-220ENST00000552286 C3P01024 1663 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms