RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 NCOA1Q15788 1441 aa16.18■□□□□ 0.18
PTCH1-225ENST00000551845 ARHGEF5Q12774 1597 aa16.17■□□□□ 0.18
PTCH1-225ENST00000551845 PTPN23Q9H3S7 1636 aa16.17■□□□□ 0.18
PTCH1-225ENST00000551845 PPP6R1Q9UPN7 881 aa16.17■□□□□ 0.18
PTCH1-225ENST00000551845 ITGAEP38570 1179 aa16.16■□□□□ 0.18
PTCH1-225ENST00000551845 CAMSAP1Q5T5Y3 1602 aa16.16■□□□□ 0.18
PTCH1-225ENST00000551845 KIDINS220Q9ULH0 1771 aa16.15■□□□□ 0.18
PTCH1-225ENST00000551845 DAPK1P53355 1430 aa16.15■□□□□ 0.18
PTCH1-225ENST00000551845 AGLP35573 1532 aa16.14■□□□□ 0.18
PTCH1-225ENST00000551845 ANKRD30AQ9BXX3 1397 aa16.14■□□□□ 0.17
PTCH1-225ENST00000551845 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.14■□□□□ 0.17
PTCH1-225ENST00000551845 NCKAP5LQ9HCH0 1330 aa16.14■□□□□ 0.17
PTCH1-225ENST00000551845 CNTLNQ9NXG0 1405 aa16.13■□□□□ 0.17
PTCH1-225ENST00000551845 ZNF335Q9H4Z2 1342 aaPredicted RBP16.13■□□□□ 0.17
PTCH1-225ENST00000551845 INO80Q9ULG1 1556 aaPredicted RBP16.1■□□□□ 0.17
PTCH1-225ENST00000551845 KIF15Q9NS87 1388 aa16.1■□□□□ 0.17
PTCH1-225ENST00000551845 SHANK2Q9UPX8 1470 aa16.09■□□□□ 0.17
PTCH1-225ENST00000551845 SCAF1Q9H7N4 1312 aaKnown RBP16.08■□□□□ 0.16
PTCH1-225ENST00000551845 WASHC2CQ9Y4E1 1318 aa16.08■□□□□ 0.16
PTCH1-225ENST00000551845 NPATQ14207 1427 aa16.08■□□□□ 0.16
PTCH1-225ENST00000551845 RRBP1Q9P2E9 1410 aaKnown RBP16.08■□□□□ 0.16
PTCH1-225ENST00000551845 MAST1Q9Y2H9 1570 aa16.07■□□□□ 0.16
PTCH1-225ENST00000551845 MROH2AA6NES4 1674 aa16.07■□□□□ 0.16
PTCH1-225ENST00000551845 ZMYM3Q14202 1370 aa16.06■□□□□ 0.16
PTCH1-225ENST00000551845 PKD2Q13563 968 aa16.05■□□□□ 0.16
PTCH1-225ENST00000551845 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.05■□□□□ 0.16
PTCH1-225ENST00000551845 DNMT1P26358 1616 aaKnown RBP16.05■□□□□ 0.16
PTCH1-225ENST00000551845 PTPRKQ15262 1439 aa16.04■□□□□ 0.16
PTCH1-225ENST00000551845 PIP4K2BP78356 416 aa16.03■□□□□ 0.16
PTCH1-225ENST00000551845 DUOX2Q9NRD8 1548 aa16.03■□□□□ 0.16
PTCH1-225ENST00000551845 ROCK1Q13464 1354 aa16.02■□□□□ 0.16
PTCH1-225ENST00000551845 CLTCQ00610 1675 aaKnown RBP16.02■□□□□ 0.16
PTCH1-225ENST00000551845 ADGBQ8N7X0 1667 aa16.02■□□□□ 0.16
PTCH1-225ENST00000551845 MYO3AQ8NEV4 1616 aa16.02■□□□□ 0.16
PTCH1-225ENST00000551845 PLXNC1O60486 1568 aa16.02■□□□□ 0.16
PTCH1-225ENST00000551845 HSPA1LP34931 641 aa16.02■□□□□ 0.16
PTCH1-225ENST00000551845 MED1Q15648 1581 aaPredicted RBP16.01■□□□□ 0.15
PTCH1-225ENST00000551845 PLA2R1Q13018 1463 aa16.01■□□□□ 0.15
PTCH1-225ENST00000551845 ERBINQ96RT1 1412 aa16.01■□□□□ 0.15
PTCH1-225ENST00000551845 ZNF142P52746 1687 aaPredicted RBP16■□□□□ 0.15
PTCH1-225ENST00000551845 ADGRL2O95490 1459 aa16■□□□□ 0.15
PTCH1-225ENST00000551845 ANKRD50Q9ULJ7 1429 aa16■□□□□ 0.15
PTCH1-225ENST00000551845 CEP170BQ9Y4F5 1589 aaPredicted RBP16■□□□□ 0.15
PTCH1-225ENST00000551845 KANK1Q14678 1352 aa15.99■□□□□ 0.15
PTCH1-225ENST00000551845 TOM1O60784 492 aa15.98■□□□□ 0.15
PTCH1-225ENST00000551845 FBXO31Q5XUX0 539 aaPredicted RBP15.95■□□□□ 0.14
PTCH1-225ENST00000551845 CROCC2H7BZ55 1655 aa15.92■□□□□ 0.14
PTCH1-225ENST00000551845 CPS1P31327 1500 aa15.91■□□□□ 0.14
PTCH1-225ENST00000551845 A2ML1A8K2U0 1454 aa15.91■□□□□ 0.14
PTCH1-225ENST00000551845 NUP155O75694 1391 aa15.89■□□□□ 0.13
PTCH1-225ENST00000551845 POLR1AO95602 1720 aaPredicted RBP15.89■□□□□ 0.13
PTCH1-225ENST00000551845 TRIM52Q96A61 297 aa15.89■□□□□ 0.13
PTCH1-225ENST00000551845 EIF2AK4Q9P2K8 1649 aaKnown RBP15.89■□□□□ 0.13
PTCH1-225ENST00000551845 KDM5DQ9BY66 1539 aa15.89■□□□□ 0.13
PTCH1-225ENST00000551845 FAM135AQ9P2D6 1515 aa15.89■□□□□ 0.13
PTCH1-225ENST00000551845 NAIPQ13075 1403 aa15.86■□□□□ 0.13
PTCH1-225ENST00000551845 TNRQ92752 1358 aa15.86■□□□□ 0.13
PTCH1-225ENST00000551845 HFM1A2PYH4 1435 aa15.85■□□□□ 0.13
PTCH1-225ENST00000551845 PZPP20742 1482 aa15.85■□□□□ 0.13
PTCH1-225ENST00000551845 ABCC3O15438 1527 aa15.85■□□□□ 0.13
PTCH1-225ENST00000551845 RNF17Q9BXT8 1623 aaKnown RBP15.85■□□□□ 0.13
PTCH1-225ENST00000551845 ACIN1Q9UKV3 1341 aaKnown RBP15.85■□□□□ 0.13
PTCH1-225ENST00000551845 NEURL4Q96JN8 1562 aa15.84■□□□□ 0.13
PTCH1-225ENST00000551845 ANKLE2Q86XL3 938 aa15.84■□□□□ 0.13
PTCH1-225ENST00000551845 ARHGAP31Q2M1Z3 1444 aa15.84■□□□□ 0.13
PTCH1-225ENST00000551845 THEMISQ8N1K5 641 aaPredicted RBP15.82■□□□□ 0.12
PTCH1-225ENST00000551845 PRDM15P57071 1507 aaPredicted RBP15.81■□□□□ 0.12
PTCH1-225ENST00000551845 MROH1Q8NDA8 1641 aa15.81■□□□□ 0.12
PTCH1-225ENST00000551845 SLC52A1Q9NWF4 448 aa15.8■□□□□ 0.12
PTCH1-225ENST00000551845 STAG3Q9UJ98 1225 aa15.8■□□□□ 0.12
PTCH1-225ENST00000551845 VWDEQ8N2E2 1590 aa15.79■□□□□ 0.12
PTCH1-225ENST00000551845 LMTK2Q8IWU2 1503 aa15.79■□□□□ 0.12
PTCH1-225ENST00000551845 IDI1Q13907 227 aa15.79■□□□□ 0.12
PTCH1-225ENST00000551845 SLC4A1APQ9BWU0 796 aaKnown RBP15.79■□□□□ 0.12
PTCH1-225ENST00000551845 SETD5Q9C0A6 1442 aa15.78■□□□□ 0.12
PTCH1-225ENST00000551845 ADRA2BP18089 450 aa15.78■□□□□ 0.12
PTCH1-225ENST00000551845 NPHP4O75161 1426 aaPredicted RBP15.77■□□□□ 0.12
PTCH1-225ENST00000551845 DEPDC5O75140 1603 aa15.77■□□□□ 0.12
PTCH1-225ENST00000551845 HRCP23327 699 aa15.77■□□□□ 0.12
PTCH1-225ENST00000551845 ALKQ9UM73 1620 aa15.76■□□□□ 0.11
PTCH1-225ENST00000551845 ERVK-7P63135 1459 aa15.76■□□□□ 0.11
PTCH1-225ENST00000551845 ZC3H13Q5T200 1668 aaKnown RBP15.76■□□□□ 0.11
PTCH1-225ENST00000551845 UGGT1Q9NYU2 1555 aa15.75■□□□□ 0.11
PTCH1-225ENST00000551845 MPHOSPH9Q99550 1183 aa15.75■□□□□ 0.11
PTCH1-225ENST00000551845 NLRP1Q9C000 1473 aa15.75■□□□□ 0.11
PTCH1-225ENST00000551845 TRIM26Q12899 539 aaPredicted RBP15.74■□□□□ 0.11
PTCH1-225ENST00000551845 IQGAP1P46940 1657 aa15.73■□□□□ 0.11
PTCH1-225ENST00000551845 RPRD2Q5VT52 1461 aaKnown RBP15.73■□□□□ 0.11
PTCH1-225ENST00000551845 MED14O60244 1454 aa15.72■□□□□ 0.11
PTCH1-225ENST00000551845 NOS1P29475 1434 aa15.72■□□□□ 0.11
PTCH1-225ENST00000551845 LRRC7Q96NW7 1537 aa15.72■□□□□ 0.11
PTCH1-225ENST00000551845 UNC13BO14795 1591 aa15.71■□□□□ 0.11
PTCH1-225ENST00000551845 CHGAP10645 457 aaKnown RBP15.71■□□□□ 0.11
PTCH1-225ENST00000551845 HDGFP51858 240 aaKnown RBP15.71■□□□□ 0.11
PTCH1-225ENST00000551845 STRCP1A6NGW2 1772 aa15.71■□□□□ 0.11
PTCH1-225ENST00000551845 RAB3GAP2Q9H2M9 1393 aa15.71■□□□□ 0.11
PTCH1-225ENST00000551845 RGS17Q9UGC6 210 aaPredicted RBP15.7■□□□□ 0.1
PTCH1-225ENST00000551845 EID1Q9Y6B2 187 aa15.7■□□□□ 0.1
PTCH1-225ENST00000551845 CEP152O94986 1710 aa15.7■□□□□ 0.1
PTCH1-225ENST00000551845 EFCAB6Q5THR3 1501 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms