RNA–Protein interactions for RNA: ENST00000551752.5

RBFOX1-213, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-213ENST00000551752 HOXB3P14651 431 aaPredicted RBP14.15□□□□□ -0.14
RBFOX1-213ENST00000551752 ZNF710Q8N1W2 664 aa14.15□□□□□ -0.14
RBFOX1-213ENST00000551752 WDR70Q9NW82 654 aa14.15□□□□□ -0.14
RBFOX1-213ENST00000551752 FHAD1B1AJZ9 1412 aa14.14□□□□□ -0.15
RBFOX1-213ENST00000551752 GRIN2AQ12879 1464 aa14.1□□□□□ -0.15
RBFOX1-213ENST00000551752 NUP160Q12769 1436 aa14.09□□□□□ -0.15
RBFOX1-213ENST00000551752 ADAMTS12P58397 1594 aa14.09□□□□□ -0.15
RBFOX1-213ENST00000551752 SLC34A2O95436 690 aa14.08□□□□□ -0.16
RBFOX1-213ENST00000551752 ST18O60284 1047 aa14.07□□□□□ -0.16
RBFOX1-213ENST00000551752 ZSWIM6Q9HCJ5 1215 aa14.07□□□□□ -0.16
RBFOX1-213ENST00000551752 KIF27Q86VH2 1401 aa14.06□□□□□ -0.16
RBFOX1-213ENST00000551752 ARAP1Q96P48 1450 aa14.06□□□□□ -0.16
RBFOX1-213ENST00000551752 CYB5RLQ6IPT4 315 aa14.05□□□□□ -0.16
RBFOX1-213ENST00000551752 IGF1RP08069 1367 aa14.02□□□□□ -0.17
RBFOX1-213ENST00000551752 PTCD2Q8WV60 388 aaKnown RBP14.02□□□□□ -0.17
RBFOX1-213ENST00000551752 TBC1D12O60347 775 aa14.01□□□□□ -0.17
RBFOX1-213ENST00000551752 UPF1Q92900 1129 aaKnown RBP eCLIP14.01□□□□□ -0.17
RBFOX1-213ENST00000551752 PCDHGA4Q9Y5G9 962 aa14.01□□□□□ -0.17
RBFOX1-213ENST00000551752 HOXB1P14653 301 aaPredicted RBP14□□□□□ -0.17
RBFOX1-213ENST00000551752 E2F4Q16254 413 aa14□□□□□ -0.17
RBFOX1-213ENST00000551752 ARSIQ5FYB1 569 aa14□□□□□ -0.17
RBFOX1-213ENST00000551752 CAMK2BQ13554 666 aa13.99□□□□□ -0.17
RBFOX1-213ENST00000551752 LCE2DQ5TA82 110 aaPredicted RBP13.99□□□□□ -0.17
RBFOX1-213ENST00000551752 GPR153Q6NV75 609 aa13.99□□□□□ -0.17
RBFOX1-213ENST00000551752 VSIG10Q8N0Z9 540 aa13.99□□□□□ -0.17
RBFOX1-213ENST00000551752 SHROOM2Q13796 1616 aa13.98□□□□□ -0.17
RBFOX1-213ENST00000551752 CEP170Q5SW79 1584 aa13.98□□□□□ -0.17
RBFOX1-213ENST00000551752 OXER1Q8TDS5 423 aa13.98□□□□□ -0.17
RBFOX1-213ENST00000551752 EMILIN3Q9NT22 766 aa13.97□□□□□ -0.17
RBFOX1-213ENST00000551752 CUL7Q14999 1698 aa13.97□□□□□ -0.17
RBFOX1-213ENST00000551752 MAP3K9P80192 1104 aa13.95□□□□□ -0.18
RBFOX1-213ENST00000551752 MARVELD3Q96A59 401 aa13.95□□□□□ -0.18
RBFOX1-213ENST00000551752 KDM2AQ9Y2K7 1162 aa13.95□□□□□ -0.18
RBFOX1-213ENST00000551752 KHSRPQ92945 711 aaKnown RBP eCLIP13.94□□□□□ -0.18
RBFOX1-213ENST00000551752 JPH4Q96JJ6 628 aa13.94□□□□□ -0.18
RBFOX1-213ENST00000551752 EMP3P54852 163 aa13.93□□□□□ -0.18
RBFOX1-213ENST00000551752 KIAA0586Q9BVV6 1533 aa13.93□□□□□ -0.18
RBFOX1-213ENST00000551752 NUDT7P0C024 238 aa13.92□□□□□ -0.18
RBFOX1-213ENST00000551752 CARMIL1Q5VZK9 1371 aa13.92□□□□□ -0.18
RBFOX1-213ENST00000551752 ZNF316A6NFI3 1004 aaPredicted RBP13.88□□□□□ -0.19
RBFOX1-213ENST00000551752 DPYSL4O14531 572 aa13.88□□□□□ -0.19
RBFOX1-213ENST00000551752 P3H3Q8IVL6 736 aa13.88□□□□□ -0.19
RBFOX1-213ENST00000551752 RUSC2Q8N2Y8 1516 aa13.88□□□□□ -0.19
RBFOX1-213ENST00000551752 PRG4Q92954 1404 aaPredicted RBP13.88□□□□□ -0.19
RBFOX1-213ENST00000551752 ERBB3P21860 1342 aa13.86□□□□□ -0.19
RBFOX1-213ENST00000551752 POTEMA6NI47 508 aa13.85□□□□□ -0.19
RBFOX1-213ENST00000551752 EVI5O60447 810 aa13.85□□□□□ -0.19
RBFOX1-213ENST00000551752 POTEGQ6S5H5 508 aa13.85□□□□□ -0.19
RBFOX1-213ENST00000551752 KCNV2Q8TDN2 545 aa13.85□□□□□ -0.19
RBFOX1-213ENST00000551752 FAM205CA6NFA0 338 aa13.84□□□□□ -0.19
RBFOX1-213ENST00000551752 ERCC6L2Q5T890 1561 aa13.83□□□□□ -0.19
RBFOX1-213ENST00000551752 KDM4FA0A1W2PPD8 638 aa13.83□□□□□ -0.2
RBFOX1-213ENST00000551752 SLC24A1O60721 1099 aa13.83□□□□□ -0.2
RBFOX1-213ENST00000551752 RAPGEF2Q9Y4G8 1499 aa13.82□□□□□ -0.2
RBFOX1-213ENST00000551752 ARIH1Q9Y4X5 557 aaPredicted RBP13.82□□□□□ -0.2
RBFOX1-213ENST00000551752 ARHGEF1Q92888 912 aaKnown RBP13.81□□□□□ -0.2
RBFOX1-213ENST00000551752 LHX6Q9UPM6 363 aa13.81□□□□□ -0.2
RBFOX1-213ENST00000551752 VARS2Q5ST30 1063 aaKnown RBP13.79□□□□□ -0.2
RBFOX1-213ENST00000551752 HS3ST6Q96QI5 342 aa13.78□□□□□ -0.2
RBFOX1-213ENST00000551752 ANO8Q9HCE9 1232 aaPredicted RBP13.78□□□□□ -0.2
RBFOX1-213ENST00000551752 CARMIL2Q6F5E8 1435 aa13.78□□□□□ -0.2
RBFOX1-213ENST00000551752 SPDYE16A6NNV3 312 aaPredicted RBP13.77□□□□□ -0.21
RBFOX1-213ENST00000551752 PSDA5PKW4 1024 aaPredicted RBP13.76□□□□□ -0.21
RBFOX1-213ENST00000551752 PDIA6Q15084 440 aa13.76□□□□□ -0.21
RBFOX1-213ENST00000551752 IQGAP2Q13576 1575 aa13.75□□□□□ -0.21
RBFOX1-213ENST00000551752 PRXQ9BXM0 1461 aa13.74□□□□□ -0.21
RBFOX1-213ENST00000551752 EEA1Q15075 1411 aa13.74□□□□□ -0.21
RBFOX1-213ENST00000551752 TNIKQ9UKE5 1360 aa13.74□□□□□ -0.21
RBFOX1-213ENST00000551752 UGGT2Q9NYU1 1516 aa13.73□□□□□ -0.21
RBFOX1-213ENST00000551752 PTPRGP23470 1445 aa13.73□□□□□ -0.21
RBFOX1-213ENST00000551752 POTEB3A0JP26 581 aa13.71□□□□□ -0.21
RBFOX1-213ENST00000551752 POTEBQ6S5H4 581 aa13.71□□□□□ -0.21
RBFOX1-213ENST00000551752 ZNF454Q8N9F8 522 aa13.71□□□□□ -0.21
RBFOX1-213ENST00000551752 MAPKBP1O60336 1514 aa13.7□□□□□ -0.22
RBFOX1-213ENST00000551752 PPP4R3BQ5MIZ7 849 aa13.7□□□□□ -0.22
RBFOX1-213ENST00000551752 UHRF1BP1LA0JNW5 1464 aa13.68□□□□□ -0.22
RBFOX1-213ENST00000551752 DISP1Q96F81 1524 aa13.68□□□□□ -0.22
RBFOX1-213ENST00000551752 PTGER2P43116 358 aa13.67□□□□□ -0.22
RBFOX1-213ENST00000551752 FOSBP53539 338 aa13.67□□□□□ -0.22
RBFOX1-213ENST00000551752 ZNF687Q8N1G0 1237 aa13.67□□□□□ -0.22
RBFOX1-213ENST00000551752 DDX12PQ92771 950 aa13.67□□□□□ -0.22
RBFOX1-213ENST00000551752 GOLGA3Q08378 1498 aa13.66□□□□□ -0.22
RBFOX1-213ENST00000551752 ADCY10Q96PN6 1610 aa13.65□□□□□ -0.22
RBFOX1-213ENST00000551752 CDAN1Q8IWY9 1227 aa13.65□□□□□ -0.22
RBFOX1-213ENST00000551752 ABCC10Q5T3U5 1492 aa13.65□□□□□ -0.22
RBFOX1-213ENST00000551752 PHF14O94880 888 aa13.64□□□□□ -0.23
RBFOX1-213ENST00000551752 ABCC2Q92887 1545 aa13.64□□□□□ -0.23
RBFOX1-213ENST00000551752 UACAQ9BZF9 1416 aa13.64□□□□□ -0.23
RBFOX1-213ENST00000551752 GRXCR2A6NFK2 248 aa13.63□□□□□ -0.23
RBFOX1-213ENST00000551752 PCDHGA10Q9Y5H3 936 aa13.63□□□□□ -0.23
RBFOX1-213ENST00000551752 CTTNBP2Q8WZ74 1663 aa13.63□□□□□ -0.23
RBFOX1-213ENST00000551752 ZDHHC16Q969W1 377 aa13.62□□□□□ -0.23
RBFOX1-213ENST00000551752 TYW1BQ6NUM6 668 aa13.61□□□□□ -0.23
RBFOX1-213ENST00000551752 FBXW7Q969H0 707 aa13.61□□□□□ -0.23
RBFOX1-213ENST00000551752 EPAS1Q99814 870 aa13.61□□□□□ -0.23
RBFOX1-213ENST00000551752 PCDH10Q9P2E7 1040 aa13.61□□□□□ -0.23
RBFOX1-213ENST00000551752 KIAA0556O60303 1618 aa13.61□□□□□ -0.23
RBFOX1-213ENST00000551752 NBR1Q14596 966 aa13.6□□□□□ -0.23
RBFOX1-213ENST00000551752 PLB1Q6P1J6 1458 aa13.6□□□□□ -0.23
RBFOX1-213ENST00000551752 KDM5BQ9UGL1 1544 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms