RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 PPARGC1BQ86YN6 1023 aaKnown RBP26.67■■□□□ 1.86
CDK4-208ENST00000551706 PKD2Q13563 968 aa26.65■■□□□ 1.86
CDK4-208ENST00000551706 ZMYM3Q14202 1370 aa26.65■■□□□ 1.86
CDK4-208ENST00000551706 A2MP01023 1474 aa26.63■■□□□ 1.85
CDK4-208ENST00000551706 PLA2R1Q13018 1463 aa26.63■■□□□ 1.85
CDK4-208ENST00000551706 MAST1Q9Y2H9 1570 aa26.62■■□□□ 1.85
CDK4-208ENST00000551706 FAM50AQ14320 339 aaKnown RBP26.61■■□□□ 1.85
CDK4-208ENST00000551706 MED1Q15648 1581 aaPredicted RBP26.61■■□□□ 1.85
CDK4-208ENST00000551706 ABCC5O15440 1437 aa26.6■■□□□ 1.85
CDK4-208ENST00000551706 SHANK2Q9UPX8 1470 aa26.6■■□□□ 1.85
CDK4-208ENST00000551706 ZNF142P52746 1687 aaPredicted RBP26.6■■□□□ 1.85
CDK4-208ENST00000551706 DAPK1P53355 1430 aa26.59■■□□□ 1.85
CDK4-208ENST00000551706 ADGBQ8N7X0 1667 aa26.59■■□□□ 1.85
CDK4-208ENST00000551706 PLXNC1O60486 1568 aa26.58■■□□□ 1.85
CDK4-208ENST00000551706 MYO3AQ8NEV4 1616 aa26.58■■□□□ 1.85
CDK4-208ENST00000551706 HSPA1LP34931 641 aa26.58■■□□□ 1.85
CDK4-208ENST00000551706 DHX29Q7Z478 1369 aaKnown RBP26.58■■□□□ 1.84
CDK4-208ENST00000551706 DNMT1P26358 1616 aaKnown RBP26.57■■□□□ 1.84
CDK4-208ENST00000551706 SCAF1Q9H7N4 1312 aaKnown RBP26.57■■□□□ 1.84
CDK4-208ENST00000551706 CEP170BQ9Y4F5 1589 aaPredicted RBP26.56■■□□□ 1.84
CDK4-208ENST00000551706 PPP6R1Q9UPN7 881 aa26.56■■□□□ 1.84
CDK4-208ENST00000551706 PIP4K2BP78356 416 aa26.53■■□□□ 1.84
CDK4-208ENST00000551706 CLTCQ00610 1675 aaKnown RBP26.53■■□□□ 1.84
CDK4-208ENST00000551706 CROCC2H7BZ55 1655 aa26.52■■□□□ 1.84
CDK4-208ENST00000551706 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.52■■□□□ 1.848e-9■■■□□ 17.4
CDK4-208ENST00000551706 PTPRKQ15262 1439 aa26.5■■□□□ 1.83
CDK4-208ENST00000551706 TOM1O60784 492 aa26.5■■□□□ 1.83
CDK4-208ENST00000551706 ANKRD30AQ9BXX3 1397 aa26.47■■□□□ 1.83
CDK4-208ENST00000551706 RRBP1Q9P2E9 1410 aaKnown RBP26.47■■□□□ 1.83
CDK4-208ENST00000551706 KIF15Q9NS87 1388 aa26.46■■□□□ 1.83
CDK4-208ENST00000551706 PHF23Q9BUL5 403 aaPredicted RBP26.45■■□□□ 1.82
CDK4-208ENST00000551706 DUOX2Q9NRD8 1548 aa26.44■■□□□ 1.82
CDK4-208ENST00000551706 KIF3BO15066 747 aa26.44■■□□□ 1.82
CDK4-208ENST00000551706 CHIC2Q9UKJ5 165 aa26.44■■□□□ 1.82
CDK4-208ENST00000551706 CPS1P31327 1500 aa26.44■■□□□ 1.82
CDK4-208ENST00000551706 GGT6Q6P531 493 aa26.43■■□□□ 1.82
CDK4-208ENST00000551706 RRP7BPQ9NSQ0 103 aa26.43■■□□□ 1.82
CDK4-208ENST00000551706 ADGRL2O95490 1459 aa26.42■■□□□ 1.82
CDK4-208ENST00000551706 A2ML1A8K2U0 1454 aa26.4■■□□□ 1.82
CDK4-208ENST00000551706 ERBINQ96RT1 1412 aa26.39■■□□□ 1.81
CDK4-208ENST00000551706 EIF2AK4Q9P2K8 1649 aaKnown RBP26.38■■□□□ 1.81
CDK4-208ENST00000551706 ROCK1Q13464 1354 aa26.35■■□□□ 1.81
CDK4-208ENST00000551706 FAM135AQ9P2D6 1515 aa26.35■■□□□ 1.81
CDK4-208ENST00000551706 POLR1AO95602 1720 aaPredicted RBP26.35■■□□□ 1.81
CDK4-208ENST00000551706 NEURL4Q96JN8 1562 aa26.33■■□□□ 1.81
CDK4-208ENST00000551706 ITGAEP38570 1179 aa26.33■■□□□ 1.81
CDK4-208ENST00000551706 RNF17Q9BXT8 1623 aaKnown RBP26.31■■□□□ 1.8
CDK4-208ENST00000551706 WASHC2CQ9Y4E1 1318 aa26.29■■□□□ 1.8
CDK4-208ENST00000551706 KDM5DQ9BY66 1539 aa26.29■■□□□ 1.8
CDK4-208ENST00000551706 ANKRD50Q9ULJ7 1429 aa26.27■■□□□ 1.8
CDK4-208ENST00000551706 ALKQ9UM73 1620 aa26.26■■□□□ 1.79
CDK4-208ENST00000551706 VWDEQ8N2E2 1590 aa26.25■■□□□ 1.79
CDK4-208ENST00000551706 TNRQ92752 1358 aa26.24■■□□□ 1.79
CDK4-208ENST00000551706 ANKLE2Q86XL3 938 aa26.24■■□□□ 1.79
CDK4-208ENST00000551706 FBXO31Q5XUX0 539 aaPredicted RBP26.22■■□□□ 1.79
CDK4-208ENST00000551706 KANK1Q14678 1352 aa26.21■■□□□ 1.79
CDK4-208ENST00000551706 MROH1Q8NDA8 1641 aa26.21■■□□□ 1.79
CDK4-208ENST00000551706 PRDM15P57071 1507 aaPredicted RBP26.21■■□□□ 1.79
CDK4-208ENST00000551706 SENP3Q9H4L4 574 aaPredicted RBP26.2■■□□□ 1.78
CDK4-208ENST00000551706 ABCC3O15438 1527 aa26.19■■□□□ 1.78
CDK4-208ENST00000551706 ZC3H13Q5T200 1668 aaKnown RBP26.19■■□□□ 1.78
CDK4-208ENST00000551706 DEPDC5O75140 1603 aa26.19■■□□□ 1.78
CDK4-208ENST00000551706 THEMISQ8N1K5 641 aaPredicted RBP26.18■■□□□ 1.78
CDK4-208ENST00000551706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.18■■□□□ 1.78
CDK4-208ENST00000551706 NPHP4O75161 1426 aaPredicted RBP26.17■■□□□ 1.78
CDK4-208ENST00000551706 PZPP20742 1482 aa26.17■■□□□ 1.78
CDK4-208ENST00000551706 MED14O60244 1454 aa26.16■■□□□ 1.78
CDK4-208ENST00000551706 UGGT1Q9NYU2 1555 aa26.12■■□□□ 1.77
CDK4-208ENST00000551706 RGS17Q9UGC6 210 aaPredicted RBP26.12■■□□□ 1.77
CDK4-208ENST00000551706 NLRP1Q9C000 1473 aa26.11■■□□□ 1.77
CDK4-208ENST00000551706 LRRC7Q96NW7 1537 aa26.1■■□□□ 1.77
CDK4-208ENST00000551706 IQGAP1P46940 1657 aa26.1■■□□□ 1.77
CDK4-208ENST00000551706 LMTK2Q8IWU2 1503 aa26.09■■□□□ 1.77
CDK4-208ENST00000551706 NAIPQ13075 1403 aa26.09■■□□□ 1.77
CDK4-208ENST00000551706 ARHGAP31Q2M1Z3 1444 aa26.09■■□□□ 1.77
CDK4-208ENST00000551706 HFM1A2PYH4 1435 aa26.08■■□□□ 1.77
CDK4-208ENST00000551706 STRCP1A6NGW2 1772 aa26.07■■□□□ 1.76
CDK4-208ENST00000551706 CEP152O94986 1710 aa26.07■■□□□ 1.76
CDK4-208ENST00000551706 UNC13BO14795 1591 aa26.07■■□□□ 1.76
CDK4-208ENST00000551706 SYNMO15061 1565 aa26.07■■□□□ 1.76
CDK4-208ENST00000551706 GCC2Q8IWJ2 1684 aa26.03■■□□□ 1.76
CDK4-208ENST00000551706 NUP155O75694 1391 aa26.01■■□□□ 1.75
CDK4-208ENST00000551706 ERVK-7P63135 1459 aa26■■□□□ 1.75
CDK4-208ENST00000551706 EFCAB6Q5THR3 1501 aa25.99■■□□□ 1.75
CDK4-208ENST00000551706 RPRD2Q5VT52 1461 aaKnown RBP25.97■■□□□ 1.75
CDK4-208ENST00000551706 IQGAP3Q86VI3 1631 aa25.96■■□□□ 1.75
CDK4-208ENST00000551706 TET3O43151 1660 aa25.95■■□□□ 1.74
CDK4-208ENST00000551706 POTEAQ6S8J7 498 aa25.94■■□□□ 1.74
CDK4-208ENST00000551706 ACIN1Q9UKV3 1341 aaKnown RBP25.91■■□□□ 1.74
CDK4-208ENST00000551706 NOS1P29475 1434 aa25.88■■□□□ 1.73
CDK4-208ENST00000551706 TRIM52Q96A61 297 aa25.88■■□□□ 1.73
CDK4-208ENST00000551706 FAM135BQ49AJ0 1406 aa25.87■■□□□ 1.73
CDK4-208ENST00000551706 SETD5Q9C0A6 1442 aa25.87■■□□□ 1.73
CDK4-208ENST00000551706 XIRP1Q702N8 1843 aaKnown RBP25.86■■□□□ 1.73
CDK4-208ENST00000551706 SCAF11Q99590 1463 aaKnown RBP25.85■■□□□ 1.73
CDK4-208ENST00000551706 SLC52A1Q9NWF4 448 aa25.85■■□□□ 1.73
CDK4-208ENST00000551706 CFAP65Q6ZU64 1925 aaKnown RBP25.83■■□□□ 1.73
CDK4-208ENST00000551706 UBR1Q8IWV7 1749 aa25.83■■□□□ 1.72
CDK4-208ENST00000551706 E9PCH4 1651 aa25.81■■□□□ 1.72
CDK4-208ENST00000551706 LTKP29376 864 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms