RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 KDM5DQ9BY66 1539 aa11.47□□□□□ -0.57
SMARCD1-210ENST00000551352 A2ML1A8K2U0 1454 aa11.47□□□□□ -0.57
SMARCD1-210ENST00000551352 LRRC9Q6ZRR7 1453 aa11.47□□□□□ -0.57
SMARCD1-210ENST00000551352 NCKAP5LQ9HCH0 1330 aa11.47□□□□□ -0.57
SMARCD1-210ENST00000551352 PCGF6Q9BYE7 350 aa11.47□□□□□ -0.57
SMARCD1-210ENST00000551352 STRCP1A6NGW2 1772 aa11.46□□□□□ -0.57
SMARCD1-210ENST00000551352 IQSEC2Q5JU85 1478 aa11.46□□□□□ -0.57
SMARCD1-210ENST00000551352 GGT6Q6P531 493 aa11.46□□□□□ -0.57
SMARCD1-210ENST00000551352 ESF1Q9H501 851 aaKnown RBP11.46□□□□□ -0.57
SMARCD1-210ENST00000551352 DMRT2Q9Y5R5 561 aa11.46□□□□□ -0.57
SMARCD1-210ENST00000551352 FAM135AQ9P2D6 1515 aa11.45□□□□□ -0.58
SMARCD1-210ENST00000551352 PZPP20742 1482 aa11.45□□□□□ -0.58
SMARCD1-210ENST00000551352 EIF2AK4Q9P2K8 1649 aaKnown RBP11.45□□□□□ -0.58
SMARCD1-210ENST00000551352 ZNF335Q9H4Z2 1342 aaPredicted RBP11.44□□□□□ -0.58
SMARCD1-210ENST00000551352 ZC3H13Q5T200 1668 aaKnown RBP11.44□□□□□ -0.58
SMARCD1-210ENST00000551352 SPATA31D1Q6ZQQ2 1576 aa11.44□□□□□ -0.58
SMARCD1-210ENST00000551352 FBXO31Q5XUX0 539 aaPredicted RBP11.43□□□□□ -0.58
SMARCD1-210ENST00000551352 ALKQ9UM73 1620 aa11.42□□□□□ -0.58
SMARCD1-210ENST00000551352 ABCC3O15438 1527 aa11.42□□□□□ -0.58
SMARCD1-210ENST00000551352 MAP3K1Q13233 1512 aa11.42□□□□□ -0.58
SMARCD1-210ENST00000551352 KANK4Q5T7N3 995 aaPredicted RBP11.42□□□□□ -0.58
SMARCD1-210ENST00000551352 VWDEQ8N2E2 1590 aa11.41□□□□□ -0.58
SMARCD1-210ENST00000551352 UBR1Q8IWV7 1749 aa11.41□□□□□ -0.58
SMARCD1-210ENST00000551352 ILDR2Q71H61 639 aa11.41□□□□□ -0.58
SMARCD1-210ENST00000551352 DEPDC5O75140 1603 aa11.4□□□□□ -0.58
SMARCD1-210ENST00000551352 KIF3BO15066 747 aa11.4□□□□□ -0.58
SMARCD1-210ENST00000551352 PPARGC1BQ86YN6 1023 aaKnown RBP11.4□□□□□ -0.58
SMARCD1-210ENST00000551352 TNRQ92752 1358 aa11.4□□□□□ -0.59
SMARCD1-210ENST00000551352 XIRP1Q702N8 1843 aaKnown RBP11.39□□□□□ -0.59
SMARCD1-210ENST00000551352 PPP6R1Q9UPN7 881 aa11.39□□□□□ -0.59
SMARCD1-210ENST00000551352 IQGAP1P46940 1657 aa11.39□□□□□ -0.59
SMARCD1-210ENST00000551352 PTPN23Q9H3S7 1636 aa11.38□□□□□ -0.59
SMARCD1-210ENST00000551352 MYOM3Q5VTT5 1437 aa11.38□□□□□ -0.59
SMARCD1-210ENST00000551352 UGGT1Q9NYU2 1555 aa11.37□□□□□ -0.59
SMARCD1-210ENST00000551352 ERVK-7P63135 1459 aa11.37□□□□□ -0.59
SMARCD1-210ENST00000551352 MIA2Q96PC5 1412 aa11.36□□□□□ -0.59
SMARCD1-210ENST00000551352 PRDM15P57071 1507 aaPredicted RBP11.36□□□□□ -0.59
SMARCD1-210ENST00000551352 PKD2Q13563 968 aa11.36□□□□□ -0.59
SMARCD1-210ENST00000551352 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.35□□□□□ -0.59
SMARCD1-210ENST00000551352 DISP3Q9P2K9 1392 aa11.35□□□□□ -0.59
SMARCD1-210ENST00000551352 MED14O60244 1454 aa11.35□□□□□ -0.59
SMARCD1-210ENST00000551352 NLRP1Q9C000 1473 aa11.35□□□□□ -0.59
SMARCD1-210ENST00000551352 SHANK2Q9UPX8 1470 aa11.34□□□□□ -0.59
SMARCD1-210ENST00000551352 APLP2Q06481 763 aa11.34□□□□□ -0.59
SMARCD1-210ENST00000551352 PIK3C2BO00750 1634 aa11.34□□□□□ -0.59
SMARCD1-210ENST00000551352 DUOX2Q9NRD8 1548 aa11.34□□□□□ -0.59
SMARCD1-210ENST00000551352 ABCC5O15440 1437 aa11.34□□□□□ -0.59
SMARCD1-210ENST00000551352 CPS1P31327 1500 aa11.33□□□□□ -0.6
SMARCD1-210ENST00000551352 WASHC2CQ9Y4E1 1318 aa11.33□□□□□ -0.6
SMARCD1-210ENST00000551352 MYO5BQ9ULV0 1848 aa11.32□□□□□ -0.6
SMARCD1-210ENST00000551352 RSPH4AQ5TD94 716 aa11.32□□□□□ -0.6
SMARCD1-210ENST00000551352 NPHP4O75161 1426 aaPredicted RBP11.31□□□□□ -0.6
SMARCD1-210ENST00000551352 SYNMO15061 1565 aa11.31□□□□□ -0.6
SMARCD1-210ENST00000551352 DAPK1P53355 1430 aa11.3□□□□□ -0.6
SMARCD1-210ENST00000551352 ARHGAP23Q9P227 1491 aa11.3□□□□□ -0.6
SMARCD1-210ENST00000551352 MED1Q15648 1581 aaPredicted RBP11.29□□□□□ -0.6
SMARCD1-210ENST00000551352 UBAP1LF5GYI3 381 aa11.29□□□□□ -0.6
SMARCD1-210ENST00000551352 TSPY4P0CV99 314 aa11.29□□□□□ -0.6
SMARCD1-210ENST00000551352 TSPY10P0CW01 314 aa11.29□□□□□ -0.6
SMARCD1-210ENST00000551352 SLIT1O75093 1534 aa11.29□□□□□ -0.6
SMARCD1-210ENST00000551352 FGD6Q6ZV73 1430 aa11.28□□□□□ -0.6
SMARCD1-210ENST00000551352 KDM5AP29375 1690 aaKnown RBP11.28□□□□□ -0.6
SMARCD1-210ENST00000551352 LRRC7Q96NW7 1537 aa11.28□□□□□ -0.6
SMARCD1-210ENST00000551352 KIF15Q9NS87 1388 aa11.28□□□□□ -0.6
SMARCD1-210ENST00000551352 ARHGAP31Q2M1Z3 1444 aa11.27□□□□□ -0.6
SMARCD1-210ENST00000551352 ERBINQ96RT1 1412 aa11.27□□□□□ -0.6
SMARCD1-210ENST00000551352 LMTK2Q8IWU2 1503 aa11.26□□□□□ -0.61
SMARCD1-210ENST00000551352 EFCAB6Q5THR3 1501 aa11.25□□□□□ -0.61
SMARCD1-210ENST00000551352 ADGRL2O95490 1459 aa11.25□□□□□ -0.61
SMARCD1-210ENST00000551352 SCAF11Q99590 1463 aaKnown RBP11.25□□□□□ -0.61
SMARCD1-210ENST00000551352 GCC2Q8IWJ2 1684 aa11.24□□□□□ -0.61
SMARCD1-210ENST00000551352 HSPA1LP34931 641 aa11.24□□□□□ -0.61
SMARCD1-210ENST00000551352 ANKLE2Q86XL3 938 aa11.24□□□□□ -0.61
SMARCD1-210ENST00000551352 THEMISQ8N1K5 641 aaPredicted RBP11.24□□□□□ -0.61
SMARCD1-210ENST00000551352 SOCS7O14512 581 aa11.23□□□□□ -0.61
SMARCD1-210ENST00000551352 LTKP29376 864 aa11.23□□□□□ -0.61
SMARCD1-210ENST00000551352 TET3O43151 1660 aa11.23□□□□□ -0.61
SMARCD1-210ENST00000551352 RRP7BPQ9NSQ0 103 aa11.22□□□□□ -0.61
SMARCD1-210ENST00000551352 UNC13BO14795 1591 aa11.21□□□□□ -0.61
SMARCD1-210ENST00000551352 ADGRB3O60242 1522 aa11.21□□□□□ -0.61
SMARCD1-210ENST00000551352 NOS1P29475 1434 aa11.21□□□□□ -0.61
SMARCD1-210ENST00000551352 HRCP23327 699 aa11.21□□□□□ -0.61
SMARCD1-210ENST00000551352 E9PCH4 1651 aa11.2□□□□□ -0.62
SMARCD1-210ENST00000551352 PIP4K2BP78356 416 aa11.2□□□□□ -0.62
SMARCD1-210ENST00000551352 NWD1Q149M9 1564 aa11.2□□□□□ -0.62
SMARCD1-210ENST00000551352 CHD2O14647 1828 aaKnown RBP11.19□□□□□ -0.62
SMARCD1-210ENST00000551352 CHIC2Q9UKJ5 165 aa11.19□□□□□ -0.62
SMARCD1-210ENST00000551352 TMEM131LA2VDJ0 1609 aa11.18□□□□□ -0.62
SMARCD1-210ENST00000551352 RRBP1Q9P2E9 1410 aaKnown RBP11.18□□□□□ -0.62
SMARCD1-210ENST00000551352 TMEM2Q9UHN6 1383 aa11.17□□□□□ -0.62
SMARCD1-210ENST00000551352 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.17□□□□□ -0.624e-7■■□□□ 13.9
SMARCD1-210ENST00000551352 SCAF1Q9H7N4 1312 aaKnown RBP11.16□□□□□ -0.62
SMARCD1-210ENST00000551352 ROBO1Q9Y6N7 1651 aa11.16□□□□□ -0.62
SMARCD1-210ENST00000551352 IQGAP3Q86VI3 1631 aa11.16□□□□□ -0.62
SMARCD1-210ENST00000551352 ANKRD30AQ9BXX3 1397 aa11.16□□□□□ -0.62
SMARCD1-210ENST00000551352 TOM1O60784 492 aa11.15□□□□□ -0.62
SMARCD1-210ENST00000551352 IDI1Q13907 227 aa11.15□□□□□ -0.62
SMARCD1-210ENST00000551352 ZFYVE9O95405 1425 aa11.15□□□□□ -0.62
SMARCD1-210ENST00000551352 TXNDC2Q86VQ3 553 aa11.14□□□□□ -0.63
SMARCD1-210ENST00000551352 KANK1Q14678 1352 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms