RNA–Protein interactions for RNA: ENST00000551219.5

PTPRR-211, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 2,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-211ENST00000551219 MRC2Q9UBG0 1479 aa9.03□□□□□ -0.96
PTPRR-211ENST00000551219 RALGAPBQ86X10 1494 aa9.02□□□□□ -0.96
PTPRR-211ENST00000551219 NOP58Q9Y2X3 529 aaKnown RBP9.02□□□□□ -0.97
PTPRR-211ENST00000551219 IFT140Q96RY7 1462 aa9.01□□□□□ -0.97
PTPRR-211ENST00000551219 ANKRD30AQ9BXX3 1397 aa9.01□□□□□ -0.97
PTPRR-211ENST00000551219 SHANK2Q9UPX8 1470 aa9□□□□□ -0.97
PTPRR-211ENST00000551219 BCORL1Q5H9F3 1711 aa9□□□□□ -0.97
PTPRR-211ENST00000551219 KDM5DQ9BY66 1539 aa9□□□□□ -0.97
PTPRR-211ENST00000551219 KIF15Q9NS87 1388 aa9□□□□□ -0.97
PTPRR-211ENST00000551219 ATXN8OSP0DMR3 200 aa9□□□□□ -0.97
PTPRR-211ENST00000551219 RGL2O15211 777 aa8.99□□□□□ -0.97
PTPRR-211ENST00000551219 CCDC136Q96JN2 1154 aa8.99□□□□□ -0.97
PTPRR-211ENST00000551219 FBXO3Q9UK99 471 aa8.99□□□□□ -0.97
PTPRR-211ENST00000551219 GPATCH8Q9UKJ3 1502 aaKnown RBP8.99□□□□□ -0.97
PTPRR-211ENST00000551219 BRD4O60885 1362 aaPredicted RBP8.99□□□□□ -0.97
PTPRR-211ENST00000551219 ANP32AP39687 249 aaKnown RBP8.98□□□□□ -0.97
PTPRR-211ENST00000551219 ZNF644Q9H582 1327 aaPredicted RBP8.98□□□□□ -0.97
PTPRR-211ENST00000551219 LRPPRCP42704 1394 aaKnown RBP8.98□□□□□ -0.97
PTPRR-211ENST00000551219 EIF5BO60841 1220 aaKnown RBP8.98□□□□□ -0.97
PTPRR-211ENST00000551219 CFDP1Q9UEE9 299 aaPredicted RBP8.97□□□□□ -0.97
PTPRR-211ENST00000551219 GRIN2AQ12879 1464 aa8.97□□□□□ -0.97
PTPRR-211ENST00000551219 PNISRQ8TF01 805 aaKnown RBP8.97□□□□□ -0.97
PTPRR-211ENST00000551219 RALBP1Q15311 655 aa8.97□□□□□ -0.97
PTPRR-211ENST00000551219 ANKRD50Q9ULJ7 1429 aa8.97□□□□□ -0.97
PTPRR-211ENST00000551219 TMC1Q8TDI8 760 aa8.96□□□□□ -0.97
PTPRR-211ENST00000551219 PRG4Q92954 1404 aaPredicted RBP8.96□□□□□ -0.98
PTPRR-211ENST00000551219 MYBBP1AQ9BQG0 1328 aaKnown RBP8.96□□□□□ -0.98
PTPRR-211ENST00000551219 ECM2O94769 699 aaPredicted RBP8.96□□□□□ -0.98
PTPRR-211ENST00000551219 MYCNP04198 464 aaPredicted RBP8.96□□□□□ -0.98
PTPRR-211ENST00000551219 DEKP35659 375 aaKnown RBP8.96□□□□□ -0.98
PTPRR-211ENST00000551219 IPO9Q96P70 1041 aaKnown RBP8.96□□□□□ -0.98
PTPRR-211ENST00000551219 E9PCH4 1651 aa8.95□□□□□ -0.98
PTPRR-211ENST00000551219 INSRP06213 1382 aa8.95□□□□□ -0.98
PTPRR-211ENST00000551219 ARID3CA6NKF2 412 aa8.95□□□□□ -0.98
PTPRR-211ENST00000551219 CEP170Q5SW79 1584 aa8.95□□□□□ -0.98
PTPRR-211ENST00000551219 BRPF1P55201 1214 aaPredicted RBP8.94□□□□□ -0.98
PTPRR-211ENST00000551219 ZMYM4Q5VZL5 1548 aa8.94□□□□□ -0.98
PTPRR-211ENST00000551219 PTPRGP23470 1445 aa8.94□□□□□ -0.98
PTPRR-211ENST00000551219 PDE3BQ13370 1112 aa8.94□□□□□ -0.98
PTPRR-211ENST00000551219 MAGI1Q96QZ7 1491 aaPredicted RBP8.93□□□□□ -0.98
PTPRR-211ENST00000551219 CARD11Q9BXL7 1154 aa8.93□□□□□ -0.98
PTPRR-211ENST00000551219 C9orf84Q5VXU9 1444 aa8.93□□□□□ -0.98
PTPRR-211ENST00000551219 CARMIL2Q6F5E8 1435 aa8.93□□□□□ -0.98
PTPRR-211ENST00000551219 TCERG1O14776 1098 aaKnown RBP8.92□□□□□ -0.98
PTPRR-211ENST00000551219 ZNF608Q9ULD9 1512 aaPredicted RBP8.92□□□□□ -0.98
PTPRR-211ENST00000551219 ARHGEF5Q12774 1597 aa8.92□□□□□ -0.98
PTPRR-211ENST00000551219 RRP1P56182 461 aaKnown RBP8.92□□□□□ -0.98
PTPRR-211ENST00000551219 ZBTB47Q9UFB7 747 aaPredicted RBP8.92□□□□□ -0.98
PTPRR-211ENST00000551219 CDC42BPAQ5VT25 1732 aa8.92□□□□□ -0.98
PTPRR-211ENST00000551219 NUP155O75694 1391 aa8.91□□□□□ -0.98
PTPRR-211ENST00000551219 ABCC10Q5T3U5 1492 aa8.91□□□□□ -0.98
PTPRR-211ENST00000551219 EIF4G3O43432 1585 aaKnown RBP8.91□□□□□ -0.98
PTPRR-211ENST00000551219 ZNF326Q5BKZ1 582 aaKnown RBP8.91□□□□□ -0.98
PTPRR-211ENST00000551219 POLR3GLQ9BT43 218 aa8.91□□□□□ -0.98
PTPRR-211ENST00000551219 DNAJC5BQ9UF47 199 aa8.91□□□□□ -0.98
PTPRR-211ENST00000551219 PLB1Q6P1J6 1458 aa8.91□□□□□ -0.98
PTPRR-211ENST00000551219 RTL5Q5HYW3 569 aaPredicted RBP8.91□□□□□ -0.98
PTPRR-211ENST00000551219 LAMC1P11047 1609 aa8.9□□□□□ -0.98
PTPRR-211ENST00000551219 PAK3O75914 559 aaPredicted RBP8.9□□□□□ -0.98
PTPRR-211ENST00000551219 MS4A1P11836 297 aa8.9□□□□□ -0.98
PTPRR-211ENST00000551219 NLRP13Q86W25 1043 aa8.9□□□□□ -0.98
PTPRR-211ENST00000551219 PARD3Q8TEW0 1356 aa8.9□□□□□ -0.99
PTPRR-211ENST00000551219 CHGAP10645 457 aaKnown RBP8.9□□□□□ -0.99
PTPRR-211ENST00000551219 WASHC2CQ9Y4E1 1318 aa8.9□□□□□ -0.99
PTPRR-211ENST00000551219 SYNJ2O15056 1496 aa8.89□□□□□ -0.99
PTPRR-211ENST00000551219 PLEKHH2Q8IVE3 1493 aa8.89□□□□□ -0.99
PTPRR-211ENST00000551219 ABCA8O94911 1581 aa8.89□□□□□ -0.99
PTPRR-211ENST00000551219 PLEKHG5O94827 1062 aa8.88□□□□□ -0.99
PTPRR-211ENST00000551219 RCAN3Q9UKA8 241 aa8.88□□□□□ -0.99
PTPRR-211ENST00000551219 DNAJC5Q9H3Z4 198 aa8.88□□□□□ -0.99
PTPRR-211ENST00000551219 ZNF777Q9ULD5 760 aaPredicted RBP8.88□□□□□ -0.99
PTPRR-211ENST00000551219 TRPM1Q7Z4N2 1603 aa8.88□□□□□ -0.99
PTPRR-211ENST00000551219 NUP160Q12769 1436 aa8.88□□□□□ -0.99
PTPRR-211ENST00000551219 ST20-MTHFSA0A0A6YYL1 179 aa8.88□□□□□ -0.99
PTPRR-211ENST00000551219 GPRASP1Q5JY77 1395 aa8.87□□□□□ -0.99
PTPRR-211ENST00000551219 TSPY4P0CV99 314 aa8.87□□□□□ -0.99
PTPRR-211ENST00000551219 TSPY10P0CW01 314 aa8.87□□□□□ -0.99
PTPRR-211ENST00000551219 PRAG1Q86YV5 1406 aa8.87□□□□□ -0.99
PTPRR-211ENST00000551219 PLEKHD1A6NEE1 506 aa8.87□□□□□ -0.99
PTPRR-211ENST00000551219 USP35Q9P2H5 1018 aa8.86□□□□□ -0.99
PTPRR-211ENST00000551219 BLMP54132 1417 aaPredicted RBP8.86□□□□□ -0.99
PTPRR-211ENST00000551219 COL17A1Q9UMD9 1497 aaPredicted RBP8.86□□□□□ -0.99
PTPRR-211ENST00000551219 EIF2AK4Q9P2K8 1649 aaKnown RBP8.86□□□□□ -0.99
PTPRR-211ENST00000551219 C1orf115Q9H7X2 142 aa8.86□□□□□ -0.99
PTPRR-211ENST00000551219 CCDC141Q6ZP82 1450 aa8.86□□□□□ -0.99
PTPRR-211ENST00000551219 FAM135AQ9P2D6 1515 aa8.86□□□□□ -0.99
PTPRR-211ENST00000551219 RSPH4AQ5TD94 716 aa8.85□□□□□ -0.99
PTPRR-211ENST00000551219 MAST1Q9Y2H9 1570 aa8.85□□□□□ -0.99
PTPRR-211ENST00000551219 PRDM15P57071 1507 aaPredicted RBP8.85□□□□□ -0.99
PTPRR-211ENST00000551219 EXOC6Q8TAG9 804 aa8.85□□□□□ -0.99
PTPRR-211ENST00000551219 DCAF11Q8TEB1 546 aa8.85□□□□□ -0.99
PTPRR-211ENST00000551219 UNC13BO14795 1591 aa8.84□□□□□ -0.99
PTPRR-211ENST00000551219 ATP10BO94823 1461 aa8.84□□□□□ -0.99
PTPRR-211ENST00000551219 CCDC144AA2RUR9 1427 aa8.84□□□□□ -0.99
PTPRR-211ENST00000551219 IGSF3O75054 1194 aa8.84□□□□□ -0.99
PTPRR-211ENST00000551219 CNGB1Q14028 1251 aaPredicted RBP8.84□□□□□ -0.99
PTPRR-211ENST00000551219 SPDYE4A6NLX3 237 aa8.83□□□□□ -1
PTPRR-211ENST00000551219 PDE4AP27815 886 aa8.83□□□□□ -1
PTPRR-211ENST00000551219 CHMP7Q8WUX9 453 aaPredicted RBP8.83□□□□□ -1
PTPRR-211ENST00000551219 BACH2Q9BYV9 841 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms