RNA–Protein interactions for RNA: ENST00000550653.1

CCT2-211, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 2

Gene CCT2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-211ENST00000550653 SMARCA4P51532 1647 aa9.61□□□□□ -0.87
CCT2-211ENST00000550653 PDE4AP27815 886 aa9.59□□□□□ -0.87
CCT2-211ENST00000550653 MROH2BQ7Z745 1585 aa9.58□□□□□ -0.88
CCT2-211ENST00000550653 DNAJC5Q9H3Z4 198 aa9.58□□□□□ -0.88
CCT2-211ENST00000550653 RYDENQ9NUL5 291 aaKnown RBP9.58□□□□□ -0.88
CCT2-211ENST00000550653 ATAD2BQ9ULI0 1458 aa9.57□□□□□ -0.88
CCT2-211ENST00000550653 BAZ1AQ9NRL2 1556 aaPredicted RBP9.56□□□□□ -0.88
CCT2-211ENST00000550653 PROX2Q3B8N5 592 aa9.56□□□□□ -0.88
CCT2-211ENST00000550653 ITGBL1O95965 494 aaPredicted RBP9.55□□□□□ -0.88
CCT2-211ENST00000550653 MAP3K9P80192 1104 aa9.55□□□□□ -0.88
CCT2-211ENST00000550653 ANKK1Q8NFD2 765 aa9.55□□□□□ -0.88
CCT2-211ENST00000550653 RABGEF1Q9UJ41 708 aa9.55□□□□□ -0.88
CCT2-211ENST00000550653 PPP1R3GB7ZBB8 358 aa9.54□□□□□ -0.88
CCT2-211ENST00000550653 BCAMP50895 628 aa9.54□□□□□ -0.88
CCT2-211ENST00000550653 LARP6Q9BRS8 491 aaKnown RBP9.54□□□□□ -0.88
CCT2-211ENST00000550653 NCAPD3P42695 1498 aa9.53□□□□□ -0.88
CCT2-211ENST00000550653 COL9A1P20849 921 aa9.53□□□□□ -0.88
CCT2-211ENST00000550653 PCDHGA10Q9Y5H3 936 aa9.53□□□□□ -0.88
CCT2-211ENST00000550653 DDX27Q96GQ7 796 aaKnown RBP9.52□□□□□ -0.89
CCT2-211ENST00000550653 Q6ZNB5 142 aa9.51□□□□□ -0.89
CCT2-211ENST00000550653 SMARCA2P51531 1590 aa9.5□□□□□ -0.89
CCT2-211ENST00000550653 EMILIN3Q9NT22 766 aa9.5□□□□□ -0.89
CCT2-211ENST00000550653 SOWAHBA6NEL2 793 aa9.49□□□□□ -0.89
CCT2-211ENST00000550653 WIZO95785 1651 aa9.48□□□□□ -0.89
CCT2-211ENST00000550653 BAZ1BQ9UIG0 1483 aaKnown RBP9.48□□□□□ -0.89
CCT2-211ENST00000550653 LAPTM4BQ86VI4 370 aa9.48□□□□□ -0.89
CCT2-211ENST00000550653 KIAA1468Q9P260 1216 aa9.48□□□□□ -0.89
CCT2-211ENST00000550653 HMGXB3Q12766 1538 aa9.47□□□□□ -0.89
CCT2-211ENST00000550653 PEG3Q9GZU2 1588 aa9.47□□□□□ -0.89
CCT2-211ENST00000550653 ZFRQ96KR1 1074 aaKnown RBP9.47□□□□□ -0.89
CCT2-211ENST00000550653 WBP1LQ9NX94 342 aa9.47□□□□□ -0.89
CCT2-211ENST00000550653 MFSD10Q14728 455 aa9.46□□□□□ -0.9
CCT2-211ENST00000550653 FBXW7Q969H0 707 aa9.46□□□□□ -0.9
CCT2-211ENST00000550653 GTPBP6O43824 516 aaPredicted RBP9.45□□□□□ -0.9
CCT2-211ENST00000550653 KCNC4Q03721 635 aa9.45□□□□□ -0.9
CCT2-211ENST00000550653 TYW1BQ6NUM6 668 aa9.45□□□□□ -0.9
CCT2-211ENST00000550653 NYAP1Q6ZVC0 841 aa9.45□□□□□ -0.9
CCT2-211ENST00000550653 RSF1Q96T23 1441 aaPredicted RBP9.45□□□□□ -0.9
CCT2-211ENST00000550653 PHF14O94880 888 aa9.44□□□□□ -0.9
CCT2-211ENST00000550653 SEPT9Q9UHD8 586 aaPredicted RBP9.44□□□□□ -0.9
CCT2-211ENST00000550653 NESP48681 1621 aa9.41□□□□□ -0.9
CCT2-211ENST00000550653 ONECUT3O60422 494 aaPredicted RBP9.4□□□□□ -0.9
CCT2-211ENST00000550653 C6orf132Q5T0Z8 1188 aa9.4□□□□□ -0.9
CCT2-211ENST00000550653 TRIM6-TRIM34B2RNG4 842 aa9.37□□□□□ -0.91
CCT2-211ENST00000550653 FAM98CQ17RN3 349 aaKnown RBP9.37□□□□□ -0.91
CCT2-211ENST00000550653 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.37□□□□□ -0.91
CCT2-211ENST00000550653 TSR3Q9UJK0 312 aaKnown RBP9.37□□□□□ -0.91
CCT2-211ENST00000550653 HPS5Q9UPZ3 1129 aa9.37□□□□□ -0.91
CCT2-211ENST00000550653 LCE2BO14633 110 aa9.36□□□□□ -0.91
CCT2-211ENST00000550653 LRCH3Q96II8 777 aa9.36□□□□□ -0.91
CCT2-211ENST00000550653 EPAS1Q99814 870 aa9.36□□□□□ -0.91
CCT2-211ENST00000550653 GFRA3O60609 400 aa9.35□□□□□ -0.91
CCT2-211ENST00000550653 LAPTM4AQ15012 233 aa9.35□□□□□ -0.91
CCT2-211ENST00000550653 CADPS2Q86UW7 1296 aa9.35□□□□□ -0.91
CCT2-211ENST00000550653 RBM33Q96EV2 1170 aaKnown RBP9.35□□□□□ -0.91
CCT2-211ENST00000550653 TOP2AP11388 1531 aaKnown RBP9.33□□□□□ -0.92
CCT2-211ENST00000550653 DPYSL4O14531 572 aa9.32□□□□□ -0.92
CCT2-211ENST00000550653 TRAF7Q6Q0C0 670 aa9.32□□□□□ -0.92
CCT2-211ENST00000550653 ERCC6Q03468 1493 aa9.31□□□□□ -0.92
CCT2-211ENST00000550653 CAMK2BQ13554 666 aa9.3□□□□□ -0.92
CCT2-211ENST00000550653 DDX12PQ92771 950 aa9.3□□□□□ -0.92
CCT2-211ENST00000550653 PPP4CP60510 307 aa9.29□□□□□ -0.92
CCT2-211ENST00000550653 TSKSQ9UJT2 592 aa9.29□□□□□ -0.92
CCT2-211ENST00000550653 PACS2Q86VP3 889 aa9.28□□□□□ -0.92
CCT2-211ENST00000550653 CADPSQ9ULU8 1353 aa9.27□□□□□ -0.93
CCT2-211ENST00000550653 TJAP1Q5JTD0 557 aa9.27□□□□□ -0.93
CCT2-211ENST00000550653 PRKD2Q9BZL6 878 aa9.27□□□□□ -0.93
CCT2-211ENST00000550653 LAMC3Q9Y6N6 1575 aa9.27□□□□□ -0.93
CCT2-211ENST00000550653 CCDC88BA6NC98 1476 aa9.26□□□□□ -0.93
CCT2-211ENST00000550653 KIF21AQ7Z4S6 1674 aa9.26□□□□□ -0.93
CCT2-211ENST00000550653 SUPT5HO00267 1087 aaKnown RBP9.25□□□□□ -0.93
CCT2-211ENST00000550653 TSR1Q2NL82 804 aaKnown RBP9.25□□□□□ -0.93
CCT2-211ENST00000550653 SAMD7Q7Z3H4 446 aa9.24□□□□□ -0.93
CCT2-211ENST00000550653 SMAPO00193 183 aa9.23□□□□□ -0.93
CCT2-211ENST00000550653 NRG2O14511 850 aaPredicted RBP9.23□□□□□ -0.93
CCT2-211ENST00000550653 MAP3K7O43318 606 aa9.23□□□□□ -0.93
CCT2-211ENST00000550653 EN1Q05925 392 aaPredicted RBP9.23□□□□□ -0.93
CCT2-211ENST00000550653 NBR1Q14596 966 aa9.23□□□□□ -0.93
CCT2-211ENST00000550653 PPP1R18Q6NYC8 613 aa9.23□□□□□ -0.93
CCT2-211ENST00000550653 MTRQ99707 1265 aa9.22□□□□□ -0.93
CCT2-211ENST00000550653 THOC2Q8NI27 1593 aaKnown RBP9.21□□□□□ -0.93
CCT2-211ENST00000550653 PDS5BQ9NTI5 1447 aa9.21□□□□□ -0.94
CCT2-211ENST00000550653 CFTRP13569 1480 aa9.21□□□□□ -0.94
CCT2-211ENST00000550653 CDCA7LQ96GN5 454 aa9.2□□□□□ -0.94
CCT2-211ENST00000550653 IL21Q9HBE4 155 aa9.2□□□□□ -0.94
CCT2-211ENST00000550653 ZNF516Q92618 1163 aa9.19□□□□□ -0.94
CCT2-211ENST00000550653 FAM198AQ9UFP1 575 aa9.19□□□□□ -0.94
CCT2-211ENST00000550653 V9GY48 417 aaPredicted RBP9.19□□□□□ -0.94
CCT2-211ENST00000550653 C3orf80F5H4A9 247 aa9.18□□□□□ -0.94
CCT2-211ENST00000550653 FANCD2Q9BXW9 1451 aa9.18□□□□□ -0.94
CCT2-211ENST00000550653 CUX2O14529 1486 aa9.17□□□□□ -0.94
CCT2-211ENST00000550653 PRSS12P56730 875 aa9.17□□□□□ -0.94
CCT2-211ENST00000550653 ZNF787Q6DD87 383 aa9.16□□□□□ -0.94
CCT2-211ENST00000550653 TATDN2Q93075 761 aa9.16□□□□□ -0.94
CCT2-211ENST00000550653 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.16□□□□□ -0.94
CCT2-211ENST00000550653 CEP164Q9UPV0 1460 aa9.15□□□□□ -0.94
CCT2-211ENST00000550653 PDIA6Q15084 440 aa9.15□□□□□ -0.94
CCT2-211ENST00000550653 PNMA3Q9UL41 463 aa9.15□□□□□ -0.94
CCT2-211ENST00000550653 PDZRN3Q9UPQ7 1066 aa9.15□□□□□ -0.94
CCT2-211ENST00000550653 MRC2Q9UBG0 1479 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms