RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 RTN4Q9NQC3 1192 aaKnown RBP8.25□□□□□ -1.09
CCNT1-203ENST00000550457 GOLGA8CPA6NN73 597 aa8.24□□□□□ -1.09
CCNT1-203ENST00000550457 C6orf132Q5T0Z8 1188 aa8.23□□□□□ -1.09
CCNT1-203ENST00000550457 SPRYD3Q8NCJ5 442 aa8.23□□□□□ -1.09
CCNT1-203ENST00000550457 DDX12PQ92771 950 aa8.23□□□□□ -1.09
CCNT1-203ENST00000550457 RABGEF1Q9UJ41 708 aa8.23□□□□□ -1.09
CCNT1-203ENST00000550457 AMER1Q5JTC6 1135 aaPredicted RBP8.22□□□□□ -1.09
CCNT1-203ENST00000550457 EPAS1Q99814 870 aa8.22□□□□□ -1.09
CCNT1-203ENST00000550457 RBM33Q96EV2 1170 aaKnown RBP8.21□□□□□ -1.1
CCNT1-203ENST00000550457 KIAA1468Q9P260 1216 aa8.21□□□□□ -1.1
CCNT1-203ENST00000550457 PDIA6Q15084 440 aa8.19□□□□□ -1.1
CCNT1-203ENST00000550457 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.18□□□□□ -1.1
CCNT1-203ENST00000550457 BCAMP50895 628 aa8.17□□□□□ -1.1
CCNT1-203ENST00000550457 TSR1Q2NL82 804 aaKnown RBP8.17□□□□□ -1.1
CCNT1-203ENST00000550457 PAXIP1Q6ZW49 1069 aaPredicted RBP8.17□□□□□ -1.1
CCNT1-203ENST00000550457 ANKK1Q8NFD2 765 aa8.17□□□□□ -1.1
CCNT1-203ENST00000550457 SEPT9Q9UHD8 586 aaPredicted RBP8.17□□□□□ -1.1
CCNT1-203ENST00000550457 TRIM6-TRIM34B2RNG4 842 aa8.16□□□□□ -1.1
CCNT1-203ENST00000550457 ONECUT3O60422 494 aaPredicted RBP8.16□□□□□ -1.1
CCNT1-203ENST00000550457 PRIM1P49642 420 aaKnown RBP8.16□□□□□ -1.1
CCNT1-203ENST00000550457 EN1Q05925 392 aaPredicted RBP8.16□□□□□ -1.1
CCNT1-203ENST00000550457 NBR1Q14596 966 aa8.16□□□□□ -1.1
CCNT1-203ENST00000550457 IFFO2Q5TF58 517 aa8.16□□□□□ -1.1
CCNT1-203ENST00000550457 LAPTM4BQ86VI4 370 aa8.16□□□□□ -1.1
CCNT1-203ENST00000550457 ZFRQ96KR1 1074 aaKnown RBP8.16□□□□□ -1.1
CCNT1-203ENST00000550457 CFAP44Q96MT7 982 aa8.16□□□□□ -1.1
CCNT1-203ENST00000550457 SOWAHBA6NEL2 793 aa8.14□□□□□ -1.11
CCNT1-203ENST00000550457 SPDYE16A6NNV3 312 aaPredicted RBP8.14□□□□□ -1.11
CCNT1-203ENST00000550457 E2F4Q16254 413 aa8.14□□□□□ -1.11
CCNT1-203ENST00000550457 MAP3K7O43318 606 aa8.13□□□□□ -1.11
CCNT1-203ENST00000550457 TSKSQ9UJT2 592 aa8.13□□□□□ -1.11
CCNT1-203ENST00000550457 ARIH1Q9Y4X5 557 aaPredicted RBP8.13□□□□□ -1.11
CCNT1-203ENST00000550457 A0A0G2JS52 829 aa8.12□□□□□ -1.11
CCNT1-203ENST00000550457 FAM98CQ17RN3 349 aaKnown RBP8.11□□□□□ -1.11
CCNT1-203ENST00000550457 WBP1LQ9NX94 342 aa8.11□□□□□ -1.11
CCNT1-203ENST00000550457 FAM198AQ9UFP1 575 aa8.1□□□□□ -1.11
CCNT1-203ENST00000550457 GRXCR2A6NFK2 248 aa8.09□□□□□ -1.11
CCNT1-203ENST00000550457 C3orf80F5H4A9 247 aa8.09□□□□□ -1.11
CCNT1-203ENST00000550457 ITGBL1O95965 494 aaPredicted RBP8.09□□□□□ -1.11
CCNT1-203ENST00000550457 WDR70Q9NW82 654 aa8.08□□□□□ -1.12
CCNT1-203ENST00000550457 OSBPP22059 807 aa8.07□□□□□ -1.12
CCNT1-203ENST00000550457 PACS2Q86VP3 889 aa8.07□□□□□ -1.12
CCNT1-203ENST00000550457 CDCA7LQ96GN5 454 aa8.07□□□□□ -1.12
CCNT1-203ENST00000550457 SMAPO00193 183 aa8.06□□□□□ -1.12
CCNT1-203ENST00000550457 PRSS12P56730 875 aa8.06□□□□□ -1.12
CCNT1-203ENST00000550457 CDHR5Q9HBB8 845 aa8.06□□□□□ -1.12
CCNT1-203ENST00000550457 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.06□□□□□ -1.12
CCNT1-203ENST00000550457 HPS5Q9UPZ3 1129 aa8.06□□□□□ -1.12
CCNT1-203ENST00000550457 RGS20O76081 388 aa8.05□□□□□ -1.12
CCNT1-203ENST00000550457 NYAP1Q6ZVC0 841 aa8.05□□□□□ -1.12
CCNT1-203ENST00000550457 LRCH3Q96II8 777 aa8.05□□□□□ -1.12
CCNT1-203ENST00000550457 TSR3Q9UJK0 312 aaKnown RBP8.05□□□□□ -1.12
CCNT1-203ENST00000550457 CERKQ8TCT0 537 aa8.02□□□□□ -1.13
CCNT1-203ENST00000550457 TSHZ2Q9NRE2 1034 aa8.02□□□□□ -1.13
CCNT1-203ENST00000550457 SAMD7Q7Z3H4 446 aa8.01□□□□□ -1.13
CCNT1-203ENST00000550457 TATDN2Q93075 761 aa8.01□□□□□ -1.13
CCNT1-203ENST00000550457 KCNC4Q03721 635 aa8□□□□□ -1.13
CCNT1-203ENST00000550457 NPDC1Q9NQX5 325 aaPredicted RBP8□□□□□ -1.13
CCNT1-203ENST00000550457 PNMA3Q9UL41 463 aa8□□□□□ -1.13
CCNT1-203ENST00000550457 NBPF26B4DH59 902 aa7.98□□□□□ -1.13
CCNT1-203ENST00000550457 PPP4CP60510 307 aa7.98□□□□□ -1.13
CCNT1-203ENST00000550457 NUDT18Q6ZVK8 323 aa7.98□□□□□ -1.13
CCNT1-203ENST00000550457 TTC13Q8NBP0 860 aa7.98□□□□□ -1.13
CCNT1-203ENST00000550457 IRX2Q9BZI1 471 aaPredicted RBP7.97□□□□□ -1.13
CCNT1-203ENST00000550457 RBM27Q9P2N5 1060 aaKnown RBP7.97□□□□□ -1.13
CCNT1-203ENST00000550457 MLLT3P42568 568 aaPredicted RBP7.96□□□□□ -1.14
CCNT1-203ENST00000550457 PADI6Q6TGC4 694 aa7.96□□□□□ -1.14
CCNT1-203ENST00000550457 KCNV2Q8TDN2 545 aa7.96□□□□□ -1.14
CCNT1-203ENST00000550457 TJAP1Q5JTD0 557 aa7.95□□□□□ -1.14
CCNT1-203ENST00000550457 ARHGEF1Q92888 912 aaKnown RBP7.94□□□□□ -1.14
CCNT1-203ENST00000550457 APLP1P51693 650 aa7.92□□□□□ -1.14
CCNT1-203ENST00000550457 MTRQ99707 1265 aa7.92□□□□□ -1.14
CCNT1-203ENST00000550457 SWT1Q5T5J6 900 aaKnown RBP7.91□□□□□ -1.14
CCNT1-203ENST00000550457 EYA1Q99502 592 aa7.91□□□□□ -1.14
CCNT1-203ENST00000550457 RNF40O75150 1001 aa7.9□□□□□ -1.14
CCNT1-203ENST00000550457 ZNF516Q92618 1163 aa7.9□□□□□ -1.14
CCNT1-203ENST00000550457 IL21Q9HBE4 155 aa7.89□□□□□ -1.15
CCNT1-203ENST00000550457 HDGFP51858 240 aaKnown RBP7.87□□□□□ -1.15
CCNT1-203ENST00000550457 PTGDRQ13258 359 aa7.87□□□□□ -1.15
CCNT1-203ENST00000550457 SLF2Q8IX21 1173 aa7.85□□□□□ -1.15
CCNT1-203ENST00000550457 NKX2-3Q8TAU0 364 aa7.85□□□□□ -1.15
CCNT1-203ENST00000550457 PPP1R18Q6NYC8 613 aa7.84□□□□□ -1.15
CCNT1-203ENST00000550457 SEMA3EO15041 775 aa7.83□□□□□ -1.16
CCNT1-203ENST00000550457 COPS2P61201 443 aa7.83□□□□□ -1.16
CCNT1-203ENST00000550457 FAM161AQ3B820 660 aa7.83□□□□□ -1.16
CCNT1-203ENST00000550457 ADGRG1Q9Y653 693 aa7.83□□□□□ -1.16
CCNT1-203ENST00000550457 NUTM2FA1L443 756 aa7.82□□□□□ -1.16
CCNT1-203ENST00000550457 PRKD2Q9BZL6 878 aa7.82□□□□□ -1.16
CCNT1-203ENST00000550457 Q6ZNB5 142 aa7.81□□□□□ -1.16
CCNT1-203ENST00000550457 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.81□□□□□ -1.16
CCNT1-203ENST00000550457 LCE2BO14633 110 aa7.8□□□□□ -1.16
CCNT1-203ENST00000550457 NECTIN2Q92692 538 aa7.8□□□□□ -1.16
CCNT1-203ENST00000550457 TMEM134Q9H6X4 195 aa7.8□□□□□ -1.16
CCNT1-203ENST00000550457 RCCD1A6NED2 376 aa7.79□□□□□ -1.16
CCNT1-203ENST00000550457 DNAJB2P25686 324 aa7.79□□□□□ -1.16
CCNT1-203ENST00000550457 RBM46Q8TBY0 533 aaKnown RBP7.79□□□□□ -1.16
CCNT1-203ENST00000550457 GFRA3O60609 400 aa7.78□□□□□ -1.16
CCNT1-203ENST00000550457 ZPR1O75312 459 aa7.78□□□□□ -1.16
CCNT1-203ENST00000550457 P3H3Q8IVL6 736 aa7.78□□□□□ -1.16
CCNT1-203ENST00000550457 BLOC1S3Q6QNY0 202 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms