RNA–Protein interactions for RNA: ENST00000550309.1

AL355112.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL355112.1, Length 1,236 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355112.1-201ENST00000550309 PPP1R3GB7ZBB8 358 aa12.13□□□□□ -0.47
AL355112.1-201ENST00000550309 PROX2Q3B8N5 592 aa12.11□□□□□ -0.47
AL355112.1-201ENST00000550309 CADPS2Q86UW7 1296 aa12.11□□□□□ -0.47
AL355112.1-201ENST00000550309 COL9A1P20849 921 aa12.1□□□□□ -0.47
AL355112.1-201ENST00000550309 RABGEF1Q9UJ41 708 aa12.1□□□□□ -0.47
AL355112.1-201ENST00000550309 RGS20O76081 388 aa12.09□□□□□ -0.47
AL355112.1-201ENST00000550309 A0A0G2JS52 829 aa12.08□□□□□ -0.48
AL355112.1-201ENST00000550309 PHF14O94880 888 aa12.08□□□□□ -0.48
AL355112.1-201ENST00000550309 TYW1BQ6NUM6 668 aa12.08□□□□□ -0.48
AL355112.1-201ENST00000550309 FBXW7Q969H0 707 aa12.07□□□□□ -0.48
AL355112.1-201ENST00000550309 ANKK1Q8NFD2 765 aa12.05□□□□□ -0.48
AL355112.1-201ENST00000550309 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.03□□□□□ -0.48
AL355112.1-201ENST00000550309 BCAMP50895 628 aa12.01□□□□□ -0.49
AL355112.1-201ENST00000550309 CAMK2BQ13554 666 aa12.01□□□□□ -0.49
AL355112.1-201ENST00000550309 LAPTM4BQ86VI4 370 aa12.01□□□□□ -0.49
AL355112.1-201ENST00000550309 KIAA1468Q9P260 1216 aa12.01□□□□□ -0.49
AL355112.1-201ENST00000550309 DPYSL4O14531 572 aa11.99□□□□□ -0.49
AL355112.1-201ENST00000550309 C6orf132Q5T0Z8 1188 aa11.99□□□□□ -0.49
AL355112.1-201ENST00000550309 EPAS1Q99814 870 aa11.99□□□□□ -0.49
AL355112.1-201ENST00000550309 SOWAHBA6NEL2 793 aa11.98□□□□□ -0.49
AL355112.1-201ENST00000550309 ITGBL1O95965 494 aaPredicted RBP11.98□□□□□ -0.49
AL355112.1-201ENST00000550309 TPRNQ4KMQ1 711 aa11.98□□□□□ -0.49
AL355112.1-201ENST00000550309 BBXQ8WY36 941 aaPredicted RBP11.98□□□□□ -0.49
AL355112.1-201ENST00000550309 IRX2Q9BZI1 471 aaPredicted RBP11.98□□□□□ -0.49
AL355112.1-201ENST00000550309 ZFRQ96KR1 1074 aaKnown RBP11.97□□□□□ -0.49
AL355112.1-201ENST00000550309 ONECUT3O60422 494 aaPredicted RBP11.96□□□□□ -0.49
AL355112.1-201ENST00000550309 SEPT9Q9UHD8 586 aaPredicted RBP11.96□□□□□ -0.49
AL355112.1-201ENST00000550309 PAXIP1Q6ZW49 1069 aaPredicted RBP11.95□□□□□ -0.5
AL355112.1-201ENST00000550309 KDM2AQ9Y2K7 1162 aa11.95□□□□□ -0.5
AL355112.1-201ENST00000550309 RBM33Q96EV2 1170 aaKnown RBP11.94□□□□□ -0.5
AL355112.1-201ENST00000550309 TRIM6-TRIM34B2RNG4 842 aa11.93□□□□□ -0.5
AL355112.1-201ENST00000550309 CFAP44Q96MT7 982 aa11.93□□□□□ -0.5
AL355112.1-201ENST00000550309 NYAP1Q6ZVC0 841 aa11.92□□□□□ -0.5
AL355112.1-201ENST00000550309 DDX12PQ92771 950 aa11.92□□□□□ -0.5
AL355112.1-201ENST00000550309 WBP1LQ9NX94 342 aa11.92□□□□□ -0.5
AL355112.1-201ENST00000550309 FAM98CQ17RN3 349 aaKnown RBP11.89□□□□□ -0.51
AL355112.1-201ENST00000550309 KCNC4Q03721 635 aa11.86□□□□□ -0.51
AL355112.1-201ENST00000550309 EN1Q05925 392 aaPredicted RBP11.85□□□□□ -0.51
AL355112.1-201ENST00000550309 NBR1Q14596 966 aa11.85□□□□□ -0.51
AL355112.1-201ENST00000550309 LRCH3Q96II8 777 aa11.85□□□□□ -0.51
AL355112.1-201ENST00000550309 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.85□□□□□ -0.51
AL355112.1-201ENST00000550309 TSR3Q9UJK0 312 aaKnown RBP11.84□□□□□ -0.51
AL355112.1-201ENST00000550309 HPS5Q9UPZ3 1129 aa11.84□□□□□ -0.51
AL355112.1-201ENST00000550309 MAP3K7O43318 606 aa11.83□□□□□ -0.52
AL355112.1-201ENST00000550309 TSR1Q2NL82 804 aaKnown RBP11.83□□□□□ -0.52
AL355112.1-201ENST00000550309 PDIA6Q15084 440 aa11.82□□□□□ -0.52
AL355112.1-201ENST00000550309 TSKSQ9UJT2 592 aa11.82□□□□□ -0.52
AL355112.1-201ENST00000550309 PACS2Q86VP3 889 aa11.81□□□□□ -0.52
AL355112.1-201ENST00000550309 SPRYD3Q8NCJ5 442 aa11.79□□□□□ -0.52
AL355112.1-201ENST00000550309 SPDYE16A6NNV3 312 aaPredicted RBP11.78□□□□□ -0.52
AL355112.1-201ENST00000550309 PPP4CP60510 307 aa11.75□□□□□ -0.53
AL355112.1-201ENST00000550309 CDCA7LQ96GN5 454 aa11.75□□□□□ -0.53
AL355112.1-201ENST00000550309 TSHZ2Q9NRE2 1034 aa11.75□□□□□ -0.53
AL355112.1-201ENST00000550309 SMAPO00193 183 aa11.74□□□□□ -0.53
AL355112.1-201ENST00000550309 PRSS12P56730 875 aa11.73□□□□□ -0.53
AL355112.1-201ENST00000550309 Q6ZNB5 142 aa11.73□□□□□ -0.53
AL355112.1-201ENST00000550309 FAM198AQ9UFP1 575 aa11.73□□□□□ -0.53
AL355112.1-201ENST00000550309 PRIM1P49642 420 aaKnown RBP11.72□□□□□ -0.53
AL355112.1-201ENST00000550309 SAMD7Q7Z3H4 446 aa11.72□□□□□ -0.53
AL355112.1-201ENST00000550309 E2F4Q16254 413 aa11.71□□□□□ -0.53
AL355112.1-201ENST00000550309 C3orf80F5H4A9 247 aa11.7□□□□□ -0.54
AL355112.1-201ENST00000550309 CERKQ8TCT0 537 aa11.7□□□□□ -0.54
AL355112.1-201ENST00000550309 GRXCR2A6NFK2 248 aa11.69□□□□□ -0.54
AL355112.1-201ENST00000550309 TJAP1Q5JTD0 557 aa11.69□□□□□ -0.54
AL355112.1-201ENST00000550309 ARIH1Q9Y4X5 557 aaPredicted RBP11.68□□□□□ -0.54
AL355112.1-201ENST00000550309 NBPF26B4DH59 902 aa11.67□□□□□ -0.54
AL355112.1-201ENST00000550309 TATDN2Q93075 761 aa11.67□□□□□ -0.54
AL355112.1-201ENST00000550309 PNMA3Q9UL41 463 aa11.67□□□□□ -0.54
AL355112.1-201ENST00000550309 MTRQ99707 1265 aa11.64□□□□□ -0.55
AL355112.1-201ENST00000550309 CDHR5Q9HBB8 845 aa11.64□□□□□ -0.55
AL355112.1-201ENST00000550309 OSBPP22059 807 aa11.63□□□□□ -0.55
AL355112.1-201ENST00000550309 LAPTM4AQ15012 233 aa11.63□□□□□ -0.55
AL355112.1-201ENST00000550309 WDR70Q9NW82 654 aa11.63□□□□□ -0.55
AL355112.1-201ENST00000550309 NUDT18Q6ZVK8 323 aa11.62□□□□□ -0.55
AL355112.1-201ENST00000550309 IL21Q9HBE4 155 aa11.62□□□□□ -0.55
AL355112.1-201ENST00000550309 GFRA3O60609 400 aa11.6□□□□□ -0.55
AL355112.1-201ENST00000550309 RNF40O75150 1001 aa11.6□□□□□ -0.55
AL355112.1-201ENST00000550309 RBM27Q9P2N5 1060 aaKnown RBP11.6□□□□□ -0.55
AL355112.1-201ENST00000550309 PRKD2Q9BZL6 878 aa11.59□□□□□ -0.55
AL355112.1-201ENST00000550309 HDGFP51858 240 aaKnown RBP11.58□□□□□ -0.56
AL355112.1-201ENST00000550309 PPP1R18Q6NYC8 613 aa11.58□□□□□ -0.56
AL355112.1-201ENST00000550309 ZNF516Q92618 1163 aa11.58□□□□□ -0.56
AL355112.1-201ENST00000550309 LCE2BO14633 110 aa11.57□□□□□ -0.56
AL355112.1-201ENST00000550309 APLP1P51693 650 aa11.57□□□□□ -0.56
AL355112.1-201ENST00000550309 TTC13Q8NBP0 860 aa11.54□□□□□ -0.56
AL355112.1-201ENST00000550309 TRAF7Q6Q0C0 670 aa11.53□□□□□ -0.56
AL355112.1-201ENST00000550309 PADI6Q6TGC4 694 aa11.53□□□□□ -0.56
AL355112.1-201ENST00000550309 NPDC1Q9NQX5 325 aaPredicted RBP11.53□□□□□ -0.56
AL355112.1-201ENST00000550309 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.53□□□□□ -0.56
AL355112.1-201ENST00000550309 SWT1Q5T5J6 900 aaKnown RBP11.52□□□□□ -0.57
AL355112.1-201ENST00000550309 V9GY48 417 aaPredicted RBP11.52□□□□□ -0.57
AL355112.1-201ENST00000550309 NKX2-3Q8TAU0 364 aa11.51□□□□□ -0.57
AL355112.1-201ENST00000550309 NRG2O14511 850 aaPredicted RBP11.5□□□□□ -0.57
AL355112.1-201ENST00000550309 SLF2Q8IX21 1173 aa11.49□□□□□ -0.57
AL355112.1-201ENST00000550309 NECTIN2Q92692 538 aa11.49□□□□□ -0.57
AL355112.1-201ENST00000550309 COPS2P61201 443 aa11.48□□□□□ -0.57
AL355112.1-201ENST00000550309 TIMELESSQ9UNS1 1208 aa11.46□□□□□ -0.57
AL355112.1-201ENST00000550309 TULP1O00294 542 aaPredicted RBP11.45□□□□□ -0.58
AL355112.1-201ENST00000550309 EYA1Q99502 592 aa11.45□□□□□ -0.58
AL355112.1-201ENST00000550309 GGCXP38435 758 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms