RNA–Protein interactions for RNA: ENST00000550168.5

CACNB3-214, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 677 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-214ENST00000550168 INO80Q9ULG1 1556 aaPredicted RBP18.25■□□□□ 0.51
CACNB3-214ENST00000550168 ATP7AQ04656 1500 aa18.24■□□□□ 0.51
CACNB3-214ENST00000550168 RIMS1Q86UR5 1692 aaKnown RBP18.24■□□□□ 0.51
CACNB3-214ENST00000550168 POGZQ7Z3K3 1410 aa18.23■□□□□ 0.51
CACNB3-214ENST00000550168 UNC13BO14795 1591 aa18.23■□□□□ 0.51
CACNB3-214ENST00000550168 KDM5CP41229 1560 aa18.22■□□□□ 0.51
CACNB3-214ENST00000550168 PZPP20742 1482 aa18.21■□□□□ 0.51
CACNB3-214ENST00000550168 LTBP4Q8N2S1 1624 aa18.21■□□□□ 0.51
CACNB3-214ENST00000550168 SLC4A1APQ9BWU0 796 aaKnown RBP18.21■□□□□ 0.51
CACNB3-214ENST00000550168 MLH3Q9UHC1 1453 aa18.2■□□□□ 0.5
CACNB3-214ENST00000550168 PLPPR3Q6T4P5 718 aa18.2■□□□□ 0.5
CACNB3-214ENST00000550168 DENND4BO75064 1496 aaPredicted RBP18.2■□□□□ 0.5
CACNB3-214ENST00000550168 MAGI2Q86UL8 1455 aa18.2■□□□□ 0.5
CACNB3-214ENST00000550168 NUP155O75694 1391 aa18.19■□□□□ 0.5
CACNB3-214ENST00000550168 UBAP1LF5GYI3 381 aa18.19■□□□□ 0.5
CACNB3-214ENST00000550168 EIF2AK4Q9P2K8 1649 aaKnown RBP18.19■□□□□ 0.5
CACNB3-214ENST00000550168 STRCQ7RTU9 1775 aa18.18■□□□□ 0.5
CACNB3-214ENST00000550168 AFAP1Q8N556 730 aa18.18■□□□□ 0.5
CACNB3-214ENST00000550168 ARID4BQ4LE39 1312 aaPredicted RBP18.18■□□□□ 0.5
CACNB3-214ENST00000550168 TONSLQ96HA7 1378 aa18.17■□□□□ 0.5
CACNB3-214ENST00000550168 ANKRD30BQ9BXX2 1392 aa18.16■□□□□ 0.5
CACNB3-214ENST00000550168 DHX29Q7Z478 1369 aaKnown RBP18.15■□□□□ 0.5
CACNB3-214ENST00000550168 FAM135AQ9P2D6 1515 aa18.14■□□□□ 0.49
CACNB3-214ENST00000550168 IQGAP3Q86VI3 1631 aa18.14■□□□□ 0.49
CACNB3-214ENST00000550168 RPRD2Q5VT52 1461 aaKnown RBP18.12■□□□□ 0.49
CACNB3-214ENST00000550168 NEUROD1Q13562 356 aa18.11■□□□□ 0.49
CACNB3-214ENST00000550168 SIN3AQ96ST3 1273 aa18.11■□□□□ 0.49
CACNB3-214ENST00000550168 PTPRTO14522 1441 aa18.11■□□□□ 0.49
CACNB3-214ENST00000550168 DEPDC5O75140 1603 aa18.11■□□□□ 0.49
CACNB3-214ENST00000550168 KIDINS220Q9ULH0 1771 aa18.11■□□□□ 0.49
CACNB3-214ENST00000550168 KANK1Q14678 1352 aa18.1■□□□□ 0.49
CACNB3-214ENST00000550168 HSPA1LP34931 641 aa18.1■□□□□ 0.49
CACNB3-214ENST00000550168 MYT1LQ9UL68 1186 aa18.1■□□□□ 0.49
CACNB3-214ENST00000550168 ZMYM4Q5VZL5 1548 aa18.09■□□□□ 0.49
CACNB3-214ENST00000550168 PKD2Q13563 968 aa18.09■□□□□ 0.49
CACNB3-214ENST00000550168 SRCAPQ6ZRS2 3230 aa18.09■□□□□ 0.49
CACNB3-214ENST00000550168 A2MP01023 1474 aa18.08■□□□□ 0.49
CACNB3-214ENST00000550168 RICTORQ6R327 1708 aa18.07■□□□□ 0.48
CACNB3-214ENST00000550168 PRDM15P57071 1507 aaPredicted RBP18.07■□□□□ 0.48
CACNB3-214ENST00000550168 PPP1R15AO75807 674 aaPredicted RBP18.05■□□□□ 0.48
CACNB3-214ENST00000550168 ATP10AO60312 1499 aa18.05■□□□□ 0.48
CACNB3-214ENST00000550168 VWDEQ8N2E2 1590 aa18.04■□□□□ 0.48
CACNB3-214ENST00000550168 ZNF316A6NFI3 1004 aaPredicted RBP18.04■□□□□ 0.48
CACNB3-214ENST00000550168 RNF17Q9BXT8 1623 aaKnown RBP18.03■□□□□ 0.48
CACNB3-214ENST00000550168 PREX1Q8TCU6 1659 aa18.03■□□□□ 0.48
CACNB3-214ENST00000550168 LMTK2Q8IWU2 1503 aa18.01■□□□□ 0.47
CACNB3-214ENST00000550168 ABCA6Q8N139 1617 aa18.01■□□□□ 0.47
CACNB3-214ENST00000550168 FRMPD1Q5SYB0 1578 aa18■□□□□ 0.47
CACNB3-214ENST00000550168 DIP2CQ9Y2E4 1556 aa18■□□□□ 0.47
CACNB3-214ENST00000550168 TET3O43151 1660 aa18■□□□□ 0.47
CACNB3-214ENST00000550168 REREQ9P2R6 1566 aa18■□□□□ 0.47
CACNB3-214ENST00000550168 KIF3BO15066 747 aa17.99■□□□□ 0.47
CACNB3-214ENST00000550168 FOXD1Q16676 465 aa17.98■□□□□ 0.47
CACNB3-214ENST00000550168 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.98■□□□□ 0.47
CACNB3-214ENST00000550168 CCDC144AA2RUR9 1427 aa17.98■□□□□ 0.47
CACNB3-214ENST00000550168 RAPGEF3O95398 923 aa17.97■□□□□ 0.47
CACNB3-214ENST00000550168 MROH1Q8NDA8 1641 aa17.97■□□□□ 0.47
CACNB3-214ENST00000550168 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
CACNB3-214ENST00000550168 RGS17Q9UGC6 210 aaPredicted RBP17.93■□□□□ 0.46
CACNB3-214ENST00000550168 TRPM2O94759 1503 aa17.93■□□□□ 0.46
CACNB3-214ENST00000550168 AGLP35573 1532 aa17.93■□□□□ 0.46
CACNB3-214ENST00000550168 ZC3H13Q5T200 1668 aaKnown RBP17.92■□□□□ 0.46
CACNB3-214ENST00000550168 EFCAB6Q5THR3 1501 aa17.92■□□□□ 0.46
CACNB3-214ENST00000550168 L3MBTL2Q969R5 705 aa17.91■□□□□ 0.46
CACNB3-214ENST00000550168 PPP6R1Q9UPN7 881 aa17.91■□□□□ 0.46
CACNB3-214ENST00000550168 NEURL4Q96JN8 1562 aa17.9■□□□□ 0.46
CACNB3-214ENST00000550168 E9PCH4 1651 aa17.9■□□□□ 0.46
CACNB3-214ENST00000550168 ARHGEF40Q8TER5 1519 aa17.89■□□□□ 0.45
CACNB3-214ENST00000550168 STAC3Q96MF2 364 aa17.89■□□□□ 0.45
CACNB3-214ENST00000550168 PLA2R1Q13018 1463 aa17.88■□□□□ 0.45
CACNB3-214ENST00000550168 UHRF1BP1Q6BDS2 1440 aa17.88■□□□□ 0.45
CACNB3-214ENST00000550168 PIP4K2BP78356 416 aa17.87■□□□□ 0.45
CACNB3-214ENST00000550168 SPHKAPQ2M3C7 1700 aa17.86■□□□□ 0.45
CACNB3-214ENST00000550168 ABCC3O15438 1527 aa17.86■□□□□ 0.45
CACNB3-214ENST00000550168 ARHGAP31Q2M1Z3 1444 aa17.85■□□□□ 0.45
CACNB3-214ENST00000550168 CNTLNQ9NXG0 1405 aa17.82■□□□□ 0.44
CACNB3-214ENST00000550168 FER1L4A9Z1Z3 1794 aa17.82■□□□□ 0.44
CACNB3-214ENST00000550168 WASHC2CQ9Y4E1 1318 aa17.82■□□□□ 0.44
CACNB3-214ENST00000550168 IFFO2Q5TF58 517 aa17.81■□□□□ 0.44
CACNB3-214ENST00000550168 GGT6Q6P531 493 aa17.81■□□□□ 0.44
CACNB3-214ENST00000550168 CAMSAP1Q5T5Y3 1602 aa17.8■□□□□ 0.44
CACNB3-214ENST00000550168 DIEXFQ68CQ4 756 aaKnown RBP17.8■□□□□ 0.44
CACNB3-214ENST00000550168 CEP152O94986 1710 aa17.8■□□□□ 0.44
CACNB3-214ENST00000550168 ZNF335Q9H4Z2 1342 aaPredicted RBP17.79■□□□□ 0.44
CACNB3-214ENST00000550168 SPATA31E1Q6ZUB1 1445 aa17.79■□□□□ 0.44
CACNB3-214ENST00000550168 RALGAPBQ86X10 1494 aa17.78■□□□□ 0.44
CACNB3-214ENST00000550168 TOM1O60784 492 aa17.78■□□□□ 0.44
CACNB3-214ENST00000550168 NPATQ14207 1427 aa17.78■□□□□ 0.44
CACNB3-214ENST00000550168 SETD1BQ9UPS6 1966 aaKnown RBP17.77■□□□□ 0.44
CACNB3-214ENST00000550168 CLTCL1P53675 1640 aa17.76■□□□□ 0.43
CACNB3-214ENST00000550168 EIF4G2P78344 907 aaKnown RBP eCLIP17.76■□□□□ 0.43
CACNB3-214ENST00000550168 NOS1P29475 1434 aa17.75■□□□□ 0.43
CACNB3-214ENST00000550168 POTEAQ6S8J7 498 aa17.75■□□□□ 0.43
CACNB3-214ENST00000550168 SETD1AO15047 1707 aaKnown RBP17.75■□□□□ 0.43
CACNB3-214ENST00000550168 CEBPAP49715 358 aaPredicted RBP17.74■□□□□ 0.43
CACNB3-214ENST00000550168 MLECQ14165 292 aa17.74■□□□□ 0.43
CACNB3-214ENST00000550168 PRAG1Q86YV5 1406 aa17.73■□□□□ 0.43
CACNB3-214ENST00000550168 NBPF8Q3BBV2 869 aa17.73■□□□□ 0.43
CACNB3-214ENST00000550168 DCAF11Q8TEB1 546 aa17.73■□□□□ 0.43
CACNB3-214ENST00000550168 UPF1Q92900 1129 aaKnown RBP eCLIP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms