RNA–Protein interactions for RNA: ENST00000549896.1

AC013417.1-201, humanhuman

TSL 5 BASIC

Gene AC013417.1, Length 271 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC013417.1-201ENST00000549896 ZBED2Q9BTP6 218 aa11.89□□□□□ -0.51
AC013417.1-201ENST00000549896 TSHZ2Q9NRE2 1034 aa11.88□□□□□ -0.51
AC013417.1-201ENST00000549896 NBPF3Q9H094 633 aa11.87□□□□□ -0.51
AC013417.1-201ENST00000549896 HCSTQ9UBK5 93 aa11.87□□□□□ -0.51
AC013417.1-201ENST00000549896 DDX12PQ92771 950 aa11.86□□□□□ -0.51
AC013417.1-201ENST00000549896 GOLGA8CPA6NN73 597 aa11.84□□□□□ -0.51
AC013417.1-201ENST00000549896 NBR1Q14596 966 aa11.84□□□□□ -0.51
AC013417.1-201ENST00000549896 C6orf132Q5T0Z8 1188 aa11.83□□□□□ -0.52
AC013417.1-201ENST00000549896 MRPL50Q8N5N7 158 aaKnown RBP11.83□□□□□ -0.52
AC013417.1-201ENST00000549896 PLCB2Q00722 1185 aa11.82□□□□□ -0.52
AC013417.1-201ENST00000549896 ONECUT3O60422 494 aaPredicted RBP11.81□□□□□ -0.52
AC013417.1-201ENST00000549896 RBM33Q96EV2 1170 aaKnown RBP11.81□□□□□ -0.52
AC013417.1-201ENST00000549896 MAP3K7O43318 606 aa11.8□□□□□ -0.52
AC013417.1-201ENST00000549896 EN1Q05925 392 aaPredicted RBP11.8□□□□□ -0.52
AC013417.1-201ENST00000549896 ARHGEF1Q92888 912 aaKnown RBP11.8□□□□□ -0.52
AC013417.1-201ENST00000549896 KCTD12Q96CX2 325 aaKnown RBP11.8□□□□□ -0.52
AC013417.1-201ENST00000549896 RABGEF1Q9UJ41 708 aa11.8□□□□□ -0.52
AC013417.1-201ENST00000549896 BHMG1C9JSJ3 638 aaPredicted RBP11.79□□□□□ -0.52
AC013417.1-201ENST00000549896 P3H3Q8IVL6 736 aa11.79□□□□□ -0.52
AC013417.1-201ENST00000549896 GRXCR2A6NFK2 248 aa11.77□□□□□ -0.53
AC013417.1-201ENST00000549896 COL9A1P20849 921 aa11.77□□□□□ -0.53
AC013417.1-201ENST00000549896 CERKQ8TCT0 537 aa11.77□□□□□ -0.53
AC013417.1-201ENST00000549896 LAPTM4BQ86VI4 370 aa11.75□□□□□ -0.53
AC013417.1-201ENST00000549896 PROX2Q3B8N5 592 aa11.74□□□□□ -0.53
AC013417.1-201ENST00000549896 TRIM6-TRIM34B2RNG4 842 aa11.73□□□□□ -0.53
AC013417.1-201ENST00000549896 WNT2BQ93097 391 aa11.73□□□□□ -0.53
AC013417.1-201ENST00000549896 ANKK1Q8NFD2 765 aa11.71□□□□□ -0.53
AC013417.1-201ENST00000549896 KIAA1468Q9P260 1216 aa11.71□□□□□ -0.53
AC013417.1-201ENST00000549896 PACS2Q86VP3 889 aa11.7□□□□□ -0.54
AC013417.1-201ENST00000549896 KCNV2Q8TDN2 545 aa11.7□□□□□ -0.54
AC013417.1-201ENST00000549896 TSR1Q2NL82 804 aaKnown RBP11.69□□□□□ -0.54
AC013417.1-201ENST00000549896 THSD4Q6ZMP0 1018 aa11.69□□□□□ -0.54
AC013417.1-201ENST00000549896 OSBPP22059 807 aa11.66□□□□□ -0.54
AC013417.1-201ENST00000549896 PTPN5P54829 565 aa11.66□□□□□ -0.54
AC013417.1-201ENST00000549896 HAP1P54257 671 aaPredicted RBP11.65□□□□□ -0.54
AC013417.1-201ENST00000549896 FAM98CQ17RN3 349 aaKnown RBP11.65□□□□□ -0.54
AC013417.1-201ENST00000549896 PRSS12P56730 875 aa11.64□□□□□ -0.55
AC013417.1-201ENST00000549896 PLA2G2EQ9NZK7 142 aa11.64□□□□□ -0.55
AC013417.1-201ENST00000549896 RBM27Q9P2N5 1060 aaKnown RBP11.64□□□□□ -0.55
AC013417.1-201ENST00000549896 CDCA7LQ96GN5 454 aa11.63□□□□□ -0.55
AC013417.1-201ENST00000549896 NBPF26B4DH59 902 aa11.62□□□□□ -0.55
AC013417.1-201ENST00000549896 ZFRQ96KR1 1074 aaKnown RBP11.62□□□□□ -0.55
AC013417.1-201ENST00000549896 SEPT9Q9UHD8 586 aaPredicted RBP11.61□□□□□ -0.55
AC013417.1-201ENST00000549896 NYAP1Q6ZVC0 841 aa11.6□□□□□ -0.55
AC013417.1-201ENST00000549896 TSKSQ9UJT2 592 aa11.6□□□□□ -0.55
AC013417.1-201ENST00000549896 SOWAHBA6NEL2 793 aa11.59□□□□□ -0.55
AC013417.1-201ENST00000549896 PRIM1P49642 420 aaKnown RBP11.59□□□□□ -0.55
AC013417.1-201ENST00000549896 LRCH3Q96II8 777 aa11.58□□□□□ -0.56
AC013417.1-201ENST00000549896 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.57□□□□□ -0.56
AC013417.1-201ENST00000549896 CDHR5Q9HBB8 845 aa11.56□□□□□ -0.56
AC013417.1-201ENST00000549896 MLLT3P42568 568 aaPredicted RBP11.55□□□□□ -0.56
AC013417.1-201ENST00000549896 HDGFP51858 240 aaKnown RBP11.55□□□□□ -0.56
AC013417.1-201ENST00000549896 SMYD5Q6GMV2 418 aa11.55□□□□□ -0.56
AC013417.1-201ENST00000549896 BCAMP50895 628 aa11.54□□□□□ -0.56
AC013417.1-201ENST00000549896 TATDN2Q93075 761 aa11.54□□□□□ -0.56
AC013417.1-201ENST00000549896 PNMA3Q9UL41 463 aa11.54□□□□□ -0.56
AC013417.1-201ENST00000549896 TSR3Q9UJK0 312 aaKnown RBP11.52□□□□□ -0.57
AC013417.1-201ENST00000549896 IFFO2Q5TF58 517 aa11.51□□□□□ -0.57
AC013417.1-201ENST00000549896 NECTIN2Q92692 538 aa11.5□□□□□ -0.57
AC013417.1-201ENST00000549896 NPDC1Q9NQX5 325 aaPredicted RBP11.5□□□□□ -0.57
AC013417.1-201ENST00000549896 SLC4A3P48751 1232 aa11.49□□□□□ -0.57
AC013417.1-201ENST00000549896 PADI6Q6TGC4 694 aa11.49□□□□□ -0.57
AC013417.1-201ENST00000549896 VSIG10Q8N0Z9 540 aa11.49□□□□□ -0.57
AC013417.1-201ENST00000549896 TTC13Q8NBP0 860 aa11.49□□□□□ -0.57
AC013417.1-201ENST00000549896 FAM198AQ9UFP1 575 aa11.49□□□□□ -0.57
AC013417.1-201ENST00000549896 HPS5Q9UPZ3 1129 aa11.49□□□□□ -0.57
AC013417.1-201ENST00000549896 NUTM2FA1L443 756 aa11.48□□□□□ -0.57
AC013417.1-201ENST00000549896 SEMA3EO15041 775 aa11.48□□□□□ -0.57
AC013417.1-201ENST00000549896 NUDT18Q6ZVK8 323 aa11.48□□□□□ -0.57
AC013417.1-201ENST00000549896 SMAPO00193 183 aa11.47□□□□□ -0.57
AC013417.1-201ENST00000549896 PPP4CP60510 307 aa11.47□□□□□ -0.57
AC013417.1-201ENST00000549896 PTGDRQ13258 359 aa11.46□□□□□ -0.57
AC013417.1-201ENST00000549896 WBP1LQ9NX94 342 aa11.46□□□□□ -0.57
AC013417.1-201ENST00000549896 FCHSD2O94868 740 aa11.45□□□□□ -0.58
AC013417.1-201ENST00000549896 SAMD7Q7Z3H4 446 aa11.45□□□□□ -0.58
AC013417.1-201ENST00000549896 TESPA1A2RU30 521 aaPredicted RBP11.44□□□□□ -0.58
AC013417.1-201ENST00000549896 ITGBL1O95965 494 aaPredicted RBP11.42□□□□□ -0.58
AC013417.1-201ENST00000549896 RBM46Q8TBY0 533 aaKnown RBP11.42□□□□□ -0.58
AC013417.1-201ENST00000549896 SLF2Q8IX21 1173 aa11.41□□□□□ -0.58
AC013417.1-201ENST00000549896 TULP1O00294 542 aaPredicted RBP11.4□□□□□ -0.58
AC013417.1-201ENST00000549896 KDM2AQ9Y2K7 1162 aa11.4□□□□□ -0.58
AC013417.1-201ENST00000549896 RNF40O75150 1001 aa11.39□□□□□ -0.59
AC013417.1-201ENST00000549896 RGS20O76081 388 aa11.39□□□□□ -0.59
AC013417.1-201ENST00000549896 C3orf80F5H4A9 247 aa11.38□□□□□ -0.59
AC013417.1-201ENST00000549896 KCNC4Q03721 635 aa11.38□□□□□ -0.59
AC013417.1-201ENST00000549896 EYA1Q99502 592 aa11.38□□□□□ -0.59
AC013417.1-201ENST00000549896 HIC1Q14526 733 aa11.37□□□□□ -0.59
AC013417.1-201ENST00000549896 A0A0G2JS52 829 aa11.36□□□□□ -0.59
AC013417.1-201ENST00000549896 DNAJB2P25686 324 aa11.36□□□□□ -0.59
AC013417.1-201ENST00000549896 SWT1Q5T5J6 900 aaKnown RBP11.35□□□□□ -0.59
AC013417.1-201ENST00000549896 PRR14Q9BWN1 585 aa11.35□□□□□ -0.59
AC013417.1-201ENST00000549896 OATP04181 439 aa11.34□□□□□ -0.59
AC013417.1-201ENST00000549896 ADGRG1Q9Y653 693 aa11.34□□□□□ -0.59
AC013417.1-201ENST00000549896 RBM26Q5T8P6 1007 aaKnown RBP11.32□□□□□ -0.6
AC013417.1-201ENST00000549896 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.3□□□□□ -0.6
AC013417.1-201ENST00000549896 GNPATO15228 680 aa11.3□□□□□ -0.6
AC013417.1-201ENST00000549896 TMEM134Q9H6X4 195 aa11.29□□□□□ -0.6
AC013417.1-201ENST00000549896 IL21Q9HBE4 155 aa11.29□□□□□ -0.6
AC013417.1-201ENST00000549896 GPIHBP1Q8IV16 184 aa11.28□□□□□ -0.6
AC013417.1-201ENST00000549896 RCCD1A6NED2 376 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms