RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 SALL2Q9Y467 1007 aaPredicted RBP15.46■□□□□ 0.07
VDR-206ENST00000549336 CAMSAP2Q08AD1 1489 aa15.45■□□□□ 0.06
VDR-206ENST00000549336 NGDNQ8NEJ9 315 aaKnown RBP15.45■□□□□ 0.06
VDR-206ENST00000549336 AKNAQ7Z591 1439 aa15.45■□□□□ 0.06
VDR-206ENST00000549336 NUP153P49790 1475 aaKnown RBP15.44■□□□□ 0.06
VDR-206ENST00000549336 ABCC2Q92887 1545 aa15.44■□□□□ 0.06
VDR-206ENST00000549336 PLCH2O75038 1416 aa15.44■□□□□ 0.06
VDR-206ENST00000549336 PAK3O75914 559 aaPredicted RBP15.43■□□□□ 0.06
VDR-206ENST00000549336 CC2D1BQ5T0F9 858 aaKnown RBP15.43■□□□□ 0.06
VDR-206ENST00000549336 EVC2Q86UK5 1308 aa15.42■□□□□ 0.06
VDR-206ENST00000549336 TNNT2P45379 298 aaPredicted RBP15.41■□□□□ 0.06
VDR-206ENST00000549336 KTN1Q86UP2 1357 aaKnown RBP15.4■□□□□ 0.06
VDR-206ENST00000549336 TXNDC2Q86VQ3 553 aa15.4■□□□□ 0.06
VDR-206ENST00000549336 MIER1Q8N108 512 aa15.4■□□□□ 0.06
VDR-206ENST00000549336 KIAA1107Q9UPP5 1409 aa15.4■□□□□ 0.06
VDR-206ENST00000549336 CEP170Q5SW79 1584 aa15.4■□□□□ 0.06
VDR-206ENST00000549336 RPGRIP1LQ68CZ1 1315 aa15.38■□□□□ 0.05
VDR-206ENST00000549336 GPATCH8Q9UKJ3 1502 aaKnown RBP15.38■□□□□ 0.05
VDR-206ENST00000549336 U2SURPO15042 1029 aaKnown RBP15.38■□□□□ 0.05
VDR-206ENST00000549336 DISP1Q96F81 1524 aa15.38■□□□□ 0.05
VDR-206ENST00000549336 ABCC5O15440 1437 aa15.38■□□□□ 0.05
VDR-206ENST00000549336 PTPN23Q9H3S7 1636 aa15.37■□□□□ 0.05
VDR-206ENST00000549336 RALBP1Q15311 655 aa15.37■□□□□ 0.05
VDR-206ENST00000549336 ST20-MTHFSA0A0A6YYL1 179 aa15.36■□□□□ 0.05
VDR-206ENST00000549336 ANKLE2Q86XL3 938 aa15.36■□□□□ 0.05
VDR-206ENST00000549336 SOX12O15370 315 aa15.35■□□□□ 0.05
VDR-206ENST00000549336 DHX29Q7Z478 1369 aaKnown RBP15.34■□□□□ 0.05
VDR-206ENST00000549336 CENPJQ9HC77 1338 aaPredicted RBP15.34■□□□□ 0.05
VDR-206ENST00000549336 NAIPQ13075 1403 aa15.33■□□□□ 0.05
VDR-206ENST00000549336 NCOA1Q15788 1441 aa15.33■□□□□ 0.04
VDR-206ENST00000549336 ZNF518AQ6AHZ1 1483 aa15.33■□□□□ 0.04
VDR-206ENST00000549336 USP47Q96K76 1375 aa15.32■□□□□ 0.04
VDR-206ENST00000549336 ANKRD30BQ9BXX2 1392 aa15.32■□□□□ 0.04
VDR-206ENST00000549336 ATF3P18847 181 aa15.32■□□□□ 0.04
VDR-206ENST00000549336 MINK1Q8N4C8 1332 aaPredicted RBP15.31■□□□□ 0.04
VDR-206ENST00000549336 CSB-PGBD3P0DP91 1061 aa15.31■□□□□ 0.04
VDR-206ENST00000549336 CCER2I3L3R5 266 aa15.3■□□□□ 0.04
VDR-206ENST00000549336 ITSN2Q9NZM3 1697 aa15.29■□□□□ 0.04
VDR-206ENST00000549336 NUTM2FA1L443 756 aa15.29■□□□□ 0.04
VDR-206ENST00000549336 ABCC10Q5T3U5 1492 aa15.28■□□□□ 0.04
VDR-206ENST00000549336 NEUROD2Q15784 382 aa15.27■□□□□ 0.03
VDR-206ENST00000549336 CGNL1Q0VF96 1302 aa15.27■□□□□ 0.03
VDR-206ENST00000549336 RTF1Q92541 710 aaKnown RBP15.26■□□□□ 0.03
VDR-206ENST00000549336 BCL11AQ9H165 835 aa15.26■□□□□ 0.03
VDR-206ENST00000549336 MYH16Q9H6N6 1097 aa15.26■□□□□ 0.03
VDR-206ENST00000549336 AMPHP49418 695 aa15.25■□□□□ 0.03
VDR-206ENST00000549336 CALD1Q05682 793 aaKnown RBP15.25■□□□□ 0.03
VDR-206ENST00000549336 PROSER2Q86WR7 435 aaPredicted RBP15.25■□□□□ 0.03
VDR-206ENST00000549336 COG3Q96JB2 828 aa15.25■□□□□ 0.03
VDR-206ENST00000549336 CHMP4AQ9BY43 222 aa15.25■□□□□ 0.03
VDR-206ENST00000549336 UHRF1BP1LA0JNW5 1464 aa15.24■□□□□ 0.03
VDR-206ENST00000549336 SAMD9Q5K651 1589 aa15.24■□□□□ 0.03
VDR-206ENST00000549336 PSME1Q06323 249 aa15.23■□□□□ 0.03
VDR-206ENST00000549336 CFAP70Q5T0N1 1121 aa15.23■□□□□ 0.03
VDR-206ENST00000549336 ERBINQ96RT1 1412 aa15.23■□□□□ 0.03
VDR-206ENST00000549336 A2MP01023 1474 aa15.23■□□□□ 0.03
VDR-206ENST00000549336 U2AF1L5P0DN76 240 aaPredicted RBP15.23■□□□□ 0.03
VDR-206ENST00000549336 U2AF1Q01081 240 aaKnown RBP eCLIP15.23■□□□□ 0.03
VDR-206ENST00000549336 NLRP13Q86W25 1043 aa15.23■□□□□ 0.03
VDR-206ENST00000549336 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.22■□□□□ 0.03
VDR-206ENST00000549336 GTF3C3Q9Y5Q9 886 aa15.22■□□□□ 0.03
VDR-206ENST00000549336 LAS1LQ9Y4W2 734 aaKnown RBP15.22■□□□□ 0.03
VDR-206ENST00000549336 PANK3Q9H999 370 aa15.21■□□□□ 0.03
VDR-206ENST00000549336 RTEL1-TNFRSF6BF6WH68 1400 aa15.21■□□□□ 0.02
VDR-206ENST00000549336 TMEM132EQ6IEE7 984 aa15.21■□□□□ 0.02
VDR-206ENST00000549336 CHMP4BQ9H444 224 aaKnown RBP15.21■□□□□ 0.02
VDR-206ENST00000549336 DUOX2Q9NRD8 1548 aa15.21■□□□□ 0.02
VDR-206ENST00000549336 MS4A1P11836 297 aa15.2■□□□□ 0.02
VDR-206ENST00000549336 CCDC9Q9Y3X0 531 aaKnown RBP15.2■□□□□ 0.02
VDR-206ENST00000549336 DMRT2Q9Y5R5 561 aa15.19■□□□□ 0.02
VDR-206ENST00000549336 SYCP2Q9BX26 1530 aa15.19■□□□□ 0.02
VDR-206ENST00000549336 KDM5BQ9UGL1 1544 aa15.19■□□□□ 0.02
VDR-206ENST00000549336 ARXQ96QS3 562 aa15.18■□□□□ 0.02
VDR-206ENST00000549336 NEO1Q92859 1461 aa15.17■□□□□ 0.02
VDR-206ENST00000549336 TRAPPC8Q9Y2L5 1435 aa15.17■□□□□ 0.02
VDR-206ENST00000549336 FKBP8Q14318 412 aa15.16■□□□□ 0.02
VDR-206ENST00000549336 CHD1O14646 1710 aa15.16■□□□□ 0.02
VDR-206ENST00000549336 GPRASP1Q5JY77 1395 aa15.16■□□□□ 0.02
VDR-206ENST00000549336 LMOD3Q0VAK6 560 aa15.16■□□□□ 0.02
VDR-206ENST00000549336 CCDC136Q96JN2 1154 aa15.15■□□□□ 0.02
VDR-206ENST00000549336 TCOF1Q13428 1488 aaKnown RBP15.15■□□□□ 0.02
VDR-206ENST00000549336 SHANK2Q9UPX8 1470 aa15.15■□□□□ 0.02
VDR-206ENST00000549336 IDI1Q13907 227 aa15.15■□□□□ 0.02
VDR-206ENST00000549336 SLC26A8Q96RN1 970 aa15.15■□□□□ 0.02
VDR-206ENST00000549336 TNRQ92752 1358 aa15.14■□□□□ 0.01
VDR-206ENST00000549336 FTSJ3Q8IY81 847 aaKnown RBP15.14■□□□□ 0.01
VDR-206ENST00000549336 PRAM1Q96QH2 718 aa15.14■□□□□ 0.01
VDR-206ENST00000549336 CFAP43Q8NDM7 1665 aa15.14■□□□□ 0.01
VDR-206ENST00000549336 FBXO31Q5XUX0 539 aaPredicted RBP15.13■□□□□ 0.01
VDR-206ENST00000549336 CEBPAP49715 358 aaPredicted RBP15.12■□□□□ 0.01
VDR-206ENST00000549336 MYBBP1AQ9BQG0 1328 aaKnown RBP15.12■□□□□ 0.01
VDR-206ENST00000549336 EVA1CP58658 441 aa15.12■□□□□ 0.01
VDR-206ENST00000549336 ABCA8O94911 1581 aa15.11■□□□□ 0.01
VDR-206ENST00000549336 CNTLNQ9NXG0 1405 aa15.11■□□□□ 0.01
VDR-206ENST00000549336 ZNF692Q9BU19 519 aaPredicted RBP15.11■□□□□ 0.01
VDR-206ENST00000549336 UPF2Q9HAU5 1272 aaKnown RBP15.1■□□□□ 0.01
VDR-206ENST00000549336 NPHP1O15259 732 aa15.09■□□□□ 0.01
VDR-206ENST00000549336 DNAJC5Q9H3Z4 198 aa15.09■□□□□ 0.01
VDR-206ENST00000549336 CABP2Q9NPB3 220 aa15.09■□□□□ 0.01
VDR-206ENST00000549336 ATP10AO60312 1499 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms