RNA–Protein interactions for RNA: ENST00000548855.5

PDE1B-205, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best)

Gene PDE1B, Length 4,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-205ENST00000548855 IQGAP2Q13576 1575 aa16.9■□□□□ 0.3
PDE1B-205ENST00000548855 ANP32BQ92688 251 aaKnown RBP16.89■□□□□ 0.3
PDE1B-205ENST00000548855 ANP32EQ9BTT0 268 aa16.89■□□□□ 0.3
PDE1B-205ENST00000548855 CDK13Q14004 1512 aaKnown RBP16.89■□□□□ 0.29
PDE1B-205ENST00000548855 HAP1P54257 671 aaPredicted RBP16.89■□□□□ 0.29
PDE1B-205ENST00000548855 MAP3K1Q13233 1512 aa16.89■□□□□ 0.29
PDE1B-205ENST00000548855 CCDC146Q8IYE0 955 aa16.89■□□□□ 0.29
PDE1B-205ENST00000548855 ZBED9Q6R2W3 1325 aa16.88■□□□□ 0.29
PDE1B-205ENST00000548855 SUPT6HQ7KZ85 1726 aaKnown RBP16.88■□□□□ 0.29
PDE1B-205ENST00000548855 C9orf84Q5VXU9 1444 aa16.88■□□□□ 0.29
PDE1B-205ENST00000548855 NAIPQ13075 1403 aa16.87■□□□□ 0.29
PDE1B-205ENST00000548855 STAC3Q96MF2 364 aa16.87■□□□□ 0.29
PDE1B-205ENST00000548855 A0A0G2JS52 829 aa16.87■□□□□ 0.29
PDE1B-205ENST00000548855 DAPK1P53355 1430 aa16.86■□□□□ 0.29
PDE1B-205ENST00000548855 CNTLNQ9NXG0 1405 aa16.85■□□□□ 0.29
PDE1B-205ENST00000548855 NOP58Q9Y2X3 529 aaKnown RBP16.84■□□□□ 0.29
PDE1B-205ENST00000548855 KIAA1107Q9UPP5 1409 aa16.84■□□□□ 0.29
PDE1B-205ENST00000548855 NBPF8Q3BBV2 869 aa16.84■□□□□ 0.29
PDE1B-205ENST00000548855 TSHZ2Q9NRE2 1034 aa16.82■□□□□ 0.28
PDE1B-205ENST00000548855 ARXQ96QS3 562 aa16.82■□□□□ 0.28
PDE1B-205ENST00000548855 EID1Q9Y6B2 187 aa16.82■□□□□ 0.28
PDE1B-205ENST00000548855 EVC2Q86UK5 1308 aa16.82■□□□□ 0.28
PDE1B-205ENST00000548855 IPO8O15397 1037 aaKnown RBP16.81■□□□□ 0.28
PDE1B-205ENST00000548855 CALD1Q05682 793 aaKnown RBP16.8■□□□□ 0.28
PDE1B-205ENST00000548855 GRIN2AQ12879 1464 aa16.8■□□□□ 0.28
PDE1B-205ENST00000548855 RTF1Q92541 710 aaKnown RBP16.8■□□□□ 0.28
PDE1B-205ENST00000548855 FAM69CQ0P6D2 419 aa16.8■□□□□ 0.28
PDE1B-205ENST00000548855 CASC1Q6TDU7 716 aa16.79■□□□□ 0.28
PDE1B-205ENST00000548855 ROCK1Q13464 1354 aa16.79■□□□□ 0.28
PDE1B-205ENST00000548855 CGNL1Q0VF96 1302 aa16.79■□□□□ 0.28
PDE1B-205ENST00000548855 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.79■□□□□ 0.28
PDE1B-205ENST00000548855 EIF5BO60841 1220 aaKnown RBP16.78■□□□□ 0.28
PDE1B-205ENST00000548855 PLEKHH2Q8IVE3 1493 aa16.78■□□□□ 0.28
PDE1B-205ENST00000548855 PAK3O75914 559 aaPredicted RBP16.78■□□□□ 0.28
PDE1B-205ENST00000548855 PLB1Q6P1J6 1458 aa16.78■□□□□ 0.28
PDE1B-205ENST00000548855 ZNF608Q9ULD9 1512 aaPredicted RBP16.77■□□□□ 0.28
PDE1B-205ENST00000548855 TCERG1O14776 1098 aaKnown RBP16.77■□□□□ 0.28
PDE1B-205ENST00000548855 MAGI1Q96QZ7 1491 aaPredicted RBP16.77■□□□□ 0.27
PDE1B-205ENST00000548855 CENPJQ9HC77 1338 aaPredicted RBP16.77■□□□□ 0.27
PDE1B-205ENST00000548855 WDR97A6NE52 1622 aa16.76■□□□□ 0.27
PDE1B-205ENST00000548855 MINK1Q8N4C8 1332 aaPredicted RBP16.76■□□□□ 0.27
PDE1B-205ENST00000548855 NBPF1Q3BBV0 1214 aa16.75■□□□□ 0.27
PDE1B-205ENST00000548855 RRP7AQ9Y3A4 280 aaKnown RBP16.75■□□□□ 0.27
PDE1B-205ENST00000548855 NUTM2FA1L443 756 aa16.75■□□□□ 0.27
PDE1B-205ENST00000548855 SMC4Q9NTJ3 1288 aa16.74■□□□□ 0.27
PDE1B-205ENST00000548855 ITPRIPQ8IWB1 547 aa16.73■□□□□ 0.27
PDE1B-205ENST00000548855 NGDNQ8NEJ9 315 aaKnown RBP16.73■□□□□ 0.27
PDE1B-205ENST00000548855 RWDD1Q9H446 243 aaPredicted RBP16.73■□□□□ 0.27
PDE1B-205ENST00000548855 APAF1O14727 1248 aa16.72■□□□□ 0.27
PDE1B-205ENST00000548855 CLUAP1Q96AJ1 413 aa16.72■□□□□ 0.27
PDE1B-205ENST00000548855 CFAP70Q5T0N1 1121 aa16.72■□□□□ 0.27
PDE1B-205ENST00000548855 PTPN23Q9H3S7 1636 aa16.72■□□□□ 0.27
PDE1B-205ENST00000548855 SCAPERQ9BY12 1400 aa16.72■□□□□ 0.27
PDE1B-205ENST00000548855 ABCC5O15440 1437 aa16.72■□□□□ 0.27
PDE1B-205ENST00000548855 ARHGEF11O15085 1522 aa16.72■□□□□ 0.27
PDE1B-205ENST00000548855 GOLGA6L22H0YM25 854 aa16.71■□□□□ 0.27
PDE1B-205ENST00000548855 RRP1P56182 461 aaKnown RBP16.71■□□□□ 0.27
PDE1B-205ENST00000548855 PLIN1O60240 522 aa16.7■□□□□ 0.26
PDE1B-205ENST00000548855 TMEM132EQ6IEE7 984 aa16.7■□□□□ 0.26
PDE1B-205ENST00000548855 E9PSI1 815 aa16.69■□□□□ 0.26
PDE1B-205ENST00000548855 PMFBP1Q8TBY8 1022 aa16.68■□□□□ 0.26
PDE1B-205ENST00000548855 CAMSAP2Q08AD1 1489 aa16.68■□□□□ 0.26
PDE1B-205ENST00000548855 OS9Q13438 667 aaPredicted RBP16.68■□□□□ 0.26
PDE1B-205ENST00000548855 BRD4O60885 1362 aaPredicted RBP16.67■□□□□ 0.26
PDE1B-205ENST00000548855 EXOC6Q8TAG9 804 aa16.67■□□□□ 0.26
PDE1B-205ENST00000548855 ANKRD30BQ9BXX2 1392 aa16.67■□□□□ 0.26
PDE1B-205ENST00000548855 LMOD3Q0VAK6 560 aa16.67■□□□□ 0.26
PDE1B-205ENST00000548855 COG3Q96JB2 828 aa16.65■□□□□ 0.26
PDE1B-205ENST00000548855 CCDC141Q6ZP82 1450 aa16.65■□□□□ 0.26
PDE1B-205ENST00000548855 AMPHP49418 695 aa16.65■□□□□ 0.26
PDE1B-205ENST00000548855 NGEFQ8N5V2 710 aa16.65■□□□□ 0.26
PDE1B-205ENST00000548855 AKNAQ7Z591 1439 aa16.64■□□□□ 0.26
PDE1B-205ENST00000548855 NCOA1Q15788 1441 aa16.64■□□□□ 0.25
PDE1B-205ENST00000548855 HSP90AB1P08238 724 aaKnown RBP16.63■□□□□ 0.25
PDE1B-205ENST00000548855 BCL2L13Q9BXK5 485 aa16.63■□□□□ 0.25
PDE1B-205ENST00000548855 APBB1O00213 710 aa16.62■□□□□ 0.25
PDE1B-205ENST00000548855 NCLP19338 710 aaKnown RBP16.62■□□□□ 0.25
PDE1B-205ENST00000548855 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.62■□□□□ 0.25
PDE1B-205ENST00000548855 CRBNQ96SW2 442 aa16.62■□□□□ 0.25
PDE1B-205ENST00000548855 STK31Q9BXU1 1019 aa16.61■□□□□ 0.25
PDE1B-205ENST00000548855 HSCBQ8IWL3 235 aa16.61■□□□□ 0.25
PDE1B-205ENST00000548855 CABP2Q9NPB3 220 aa16.6■□□□□ 0.25
PDE1B-205ENST00000548855 ADAMTS8Q9UP79 889 aa16.6■□□□□ 0.25
PDE1B-205ENST00000548855 DIAPH1O60610 1272 aaKnown RBP16.6■□□□□ 0.25
PDE1B-205ENST00000548855 RAPGEF3O95398 923 aa16.6■□□□□ 0.25
PDE1B-205ENST00000548855 CENPQQ7L2Z9 268 aaPredicted RBP16.59■□□□□ 0.25
PDE1B-205ENST00000548855 LTV1Q96GA3 475 aaPredicted RBP16.59■□□□□ 0.25
PDE1B-205ENST00000548855 KIF14Q15058 1648 aa16.58■□□□□ 0.25
PDE1B-205ENST00000548855 THOC2Q8NI27 1593 aaKnown RBP16.58■□□□□ 0.25
PDE1B-205ENST00000548855 CSB-PGBD3P0DP91 1061 aa16.58■□□□□ 0.25
PDE1B-205ENST00000548855 RUNDC1Q96C34 613 aa16.58■□□□□ 0.24
PDE1B-205ENST00000548855 CFAP44Q96MT7 982 aa16.58■□□□□ 0.24
PDE1B-205ENST00000548855 GGNBP2Q9H3C7 697 aa16.58■□□□□ 0.24
PDE1B-205ENST00000548855 ELL2O00472 640 aaPredicted RBP16.57■□□□□ 0.24
PDE1B-205ENST00000548855 PPP2R1AP30153 589 aa16.57■□□□□ 0.24
PDE1B-205ENST00000548855 CHMP4AQ9BY43 222 aa16.57■□□□□ 0.24
PDE1B-205ENST00000548855 CCDC184Q52MB2 194 aa16.57■□□□□ 0.24
PDE1B-205ENST00000548855 ZKSCAN2Q63HK3 967 aa16.56■□□□□ 0.24
PDE1B-205ENST00000548855 IPO9Q96P70 1041 aaKnown RBP16.56■□□□□ 0.24
PDE1B-205ENST00000548855 COG6Q9Y2V7 657 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms