RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 TMF1P82094 1093 aa18.21■□□□□ 0.51
PRPF40B-209ENST00000548825 CCDC146Q8IYE0 955 aa18.21■□□□□ 0.51
PRPF40B-209ENST00000548825 RCAN3Q9UKA8 241 aa18.21■□□□□ 0.51
PRPF40B-209ENST00000548825 EFCAB2Q5VUJ9 269 aa18.21■□□□□ 0.51
PRPF40B-209ENST00000548825 KNSTRNQ9Y448 316 aa18.21■□□□□ 0.51
PRPF40B-209ENST00000548825 NLRP13Q86W25 1043 aa18.2■□□□□ 0.5
PRPF40B-209ENST00000548825 NEUROD2Q15784 382 aa18.2■□□□□ 0.5
PRPF40B-209ENST00000548825 RALBP1Q15311 655 aa18.19■□□□□ 0.5
PRPF40B-209ENST00000548825 PLEKHH2Q8IVE3 1493 aa18.19■□□□□ 0.5
PRPF40B-209ENST00000548825 WDR43Q15061 677 aaKnown RBP eCLIP18.19■□□□□ 0.5
PRPF40B-209ENST00000548825 SPAG9O60271 1321 aaKnown RBP18.18■□□□□ 0.5
PRPF40B-209ENST00000548825 NUP160Q12769 1436 aa18.17■□□□□ 0.5
PRPF40B-209ENST00000548825 ANP32AP39687 249 aaKnown RBP18.16■□□□□ 0.5
PRPF40B-209ENST00000548825 DISP3Q9P2K9 1392 aa18.16■□□□□ 0.5
PRPF40B-209ENST00000548825 SAFB2Q14151 953 aaKnown RBP eCLIP18.15■□□□□ 0.5
PRPF40B-209ENST00000548825 GGT6Q6P531 493 aa18.15■□□□□ 0.5
PRPF40B-209ENST00000548825 BCORL1Q5H9F3 1711 aa18.15■□□□□ 0.5
PRPF40B-209ENST00000548825 PAK3O75914 559 aaPredicted RBP18.14■□□□□ 0.49
PRPF40B-209ENST00000548825 ADAMTS8Q9UP79 889 aa18.14■□□□□ 0.49
PRPF40B-209ENST00000548825 SYCP2Q9BX26 1530 aa18.13■□□□□ 0.49
PRPF40B-209ENST00000548825 CCDC141Q6ZP82 1450 aa18.13■□□□□ 0.49
PRPF40B-209ENST00000548825 RRP1P56182 461 aaKnown RBP18.13■□□□□ 0.49
PRPF40B-209ENST00000548825 RSPH4AQ5TD94 716 aa18.13■□□□□ 0.49
PRPF40B-209ENST00000548825 ERICH6BQ5W0A0 696 aa18.11■□□□□ 0.49
PRPF40B-209ENST00000548825 ITSN2Q9NZM3 1697 aa18.11■□□□□ 0.49
PRPF40B-209ENST00000548825 ABCC10Q5T3U5 1492 aa18.1■□□□□ 0.49
PRPF40B-209ENST00000548825 CFAP70Q5T0N1 1121 aa18.1■□□□□ 0.49
PRPF40B-209ENST00000548825 SMG6Q86US8 1419 aaKnown RBP18.09■□□□□ 0.49
PRPF40B-209ENST00000548825 LAS1LQ9Y4W2 734 aaKnown RBP18.08■□□□□ 0.48
PRPF40B-209ENST00000548825 ADGRL2O95490 1459 aa18.08■□□□□ 0.48
PRPF40B-209ENST00000548825 FAM135AQ9P2D6 1515 aa18.08■□□□□ 0.48
PRPF40B-209ENST00000548825 TESK2Q96S53 571 aa18.07■□□□□ 0.48
PRPF40B-209ENST00000548825 NOP58Q9Y2X3 529 aaKnown RBP18.07■□□□□ 0.48
PRPF40B-209ENST00000548825 MBD5Q9P267 1494 aa18.07■□□□□ 0.48
PRPF40B-209ENST00000548825 CRBNQ96SW2 442 aa18.07■□□□□ 0.48
PRPF40B-209ENST00000548825 ZBTB47Q9UFB7 747 aaPredicted RBP18.07■□□□□ 0.48
PRPF40B-209ENST00000548825 RALGAPBQ86X10 1494 aa18.06■□□□□ 0.48
PRPF40B-209ENST00000548825 TRAK1Q9UPV9 953 aa18.06■□□□□ 0.48
PRPF40B-209ENST00000548825 FANCIQ9NVI1 1328 aa18.06■□□□□ 0.48
PRPF40B-209ENST00000548825 C20orf194Q5TEA3 1177 aa18.06■□□□□ 0.48
PRPF40B-209ENST00000548825 ERCC6L2Q5T890 1561 aa18.05■□□□□ 0.48
PRPF40B-209ENST00000548825 BRD4O60885 1362 aaPredicted RBP18.05■□□□□ 0.48
PRPF40B-209ENST00000548825 ARID4BQ4LE39 1312 aaPredicted RBP18.05■□□□□ 0.48
PRPF40B-209ENST00000548825 PER1O15534 1290 aaPredicted RBP18.05■□□□□ 0.48
PRPF40B-209ENST00000548825 RGS3P49796 1198 aa18.05■□□□□ 0.48
PRPF40B-209ENST00000548825 CDC42BPAQ5VT25 1732 aa18.04■□□□□ 0.48
PRPF40B-209ENST00000548825 TMEM132EQ6IEE7 984 aa18.03■□□□□ 0.48
PRPF40B-209ENST00000548825 RRP7AQ9Y3A4 280 aaKnown RBP18.03■□□□□ 0.48
PRPF40B-209ENST00000548825 PRAG1Q86YV5 1406 aa18.03■□□□□ 0.48
PRPF40B-209ENST00000548825 BCL11AQ9H165 835 aa18.03■□□□□ 0.48
PRPF40B-209ENST00000548825 TRAPPC8Q9Y2L5 1435 aa18.03■□□□□ 0.48
PRPF40B-209ENST00000548825 ABCA8O94911 1581 aa18.02■□□□□ 0.48
PRPF40B-209ENST00000548825 CANXP27824 592 aaKnown RBP18.02■□□□□ 0.48
PRPF40B-209ENST00000548825 KDM5CP41229 1560 aa18.01■□□□□ 0.47
PRPF40B-209ENST00000548825 SCAPERQ9BY12 1400 aa18.01■□□□□ 0.47
PRPF40B-209ENST00000548825 APAF1O14727 1248 aa18.01■□□□□ 0.47
PRPF40B-209ENST00000548825 NPM1P06748 294 aaKnown RBP eCLIP18.01■□□□□ 0.47
PRPF40B-209ENST00000548825 ERBINQ96RT1 1412 aa18■□□□□ 0.47
PRPF40B-209ENST00000548825 RTL5Q5HYW3 569 aaPredicted RBP18■□□□□ 0.47
PRPF40B-209ENST00000548825 A2MP01023 1474 aa17.99■□□□□ 0.47
PRPF40B-209ENST00000548825 PPP2R1AP30153 589 aa17.99■□□□□ 0.47
PRPF40B-209ENST00000548825 ADGBQ8N7X0 1667 aa17.99■□□□□ 0.47
PRPF40B-209ENST00000548825 STK26Q9P289 416 aa17.99■□□□□ 0.47
PRPF40B-209ENST00000548825 SAMD9LQ8IVG5 1584 aa17.99■□□□□ 0.47
PRPF40B-209ENST00000548825 PLA2R1Q13018 1463 aa17.99■□□□□ 0.47
PRPF40B-209ENST00000548825 SLC4A3P48751 1232 aa17.98■□□□□ 0.47
PRPF40B-209ENST00000548825 FRAT1Q92837 279 aaPredicted RBP17.98■□□□□ 0.47
PRPF40B-209ENST00000548825 UHRF1BP1Q6BDS2 1440 aa17.97■□□□□ 0.47
PRPF40B-209ENST00000548825 ADGRF5Q8IZF2 1346 aa17.96■□□□□ 0.46
PRPF40B-209ENST00000548825 TTC37Q6PGP7 1564 aa17.95■□□□□ 0.46
PRPF40B-209ENST00000548825 BCL2L13Q9BXK5 485 aa17.95■□□□□ 0.46
PRPF40B-209ENST00000548825 PDE4AP27815 886 aa17.94■□□□□ 0.46
PRPF40B-209ENST00000548825 ARHGEF12Q9NZN5 1544 aa17.94■□□□□ 0.46
PRPF40B-209ENST00000548825 SHANK2Q9UPX8 1470 aa17.94■□□□□ 0.46
PRPF40B-209ENST00000548825 DAXXQ9UER7 740 aaPredicted RBP17.93■□□□□ 0.46
PRPF40B-209ENST00000548825 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.92■□□□□ 0.46
PRPF40B-209ENST00000548825 KANK1Q14678 1352 aa17.92■□□□□ 0.46
PRPF40B-209ENST00000548825 DEKP35659 375 aaKnown RBP17.92■□□□□ 0.46
PRPF40B-209ENST00000548825 CDCA8Q53HL2 280 aa17.92■□□□□ 0.46
PRPF40B-209ENST00000548825 IPO9Q96P70 1041 aaKnown RBP17.92■□□□□ 0.46
PRPF40B-209ENST00000548825 GOLGA2Q08379 1002 aa17.92■□□□□ 0.46
PRPF40B-209ENST00000548825 SLC12A5Q9H2X9 1139 aa17.92■□□□□ 0.46
PRPF40B-209ENST00000548825 PARD3Q8TEW0 1356 aa17.91■□□□□ 0.46
PRPF40B-209ENST00000548825 BCAR3O75815 825 aa17.9■□□□□ 0.46
PRPF40B-209ENST00000548825 LRPPRCP42704 1394 aaKnown RBP17.9■□□□□ 0.46
PRPF40B-209ENST00000548825 RAPGEF3O95398 923 aa17.89■□□□□ 0.45
PRPF40B-209ENST00000548825 PDE3BQ13370 1112 aa17.89■□□□□ 0.45
PRPF40B-209ENST00000548825 MORC1Q86VD1 984 aa17.89■□□□□ 0.45
PRPF40B-209ENST00000548825 PLPPR3Q6T4P5 718 aa17.88■□□□□ 0.45
PRPF40B-209ENST00000548825 CLUAP1Q96AJ1 413 aa17.88■□□□□ 0.45
PRPF40B-209ENST00000548825 CROCC2H7BZ55 1655 aa17.88■□□□□ 0.45
PRPF40B-209ENST00000548825 SPINK5Q9NQ38 1064 aaPredicted RBP17.88■□□□□ 0.45
PRPF40B-209ENST00000548825 PPM1GO15355 546 aaPredicted RBP17.88■□□□□ 0.45
PRPF40B-209ENST00000548825 WASHC2CQ9Y4E1 1318 aa17.87■□□□□ 0.45
PRPF40B-209ENST00000548825 CDC42BPBQ9Y5S2 1711 aa17.87■□□□□ 0.45
PRPF40B-209ENST00000548825 AMER1Q5JTC6 1135 aaPredicted RBP17.87■□□□□ 0.45
PRPF40B-209ENST00000548825 ADCY10Q96PN6 1610 aa17.86■□□□□ 0.45
PRPF40B-209ENST00000548825 PLCH2O75038 1416 aa17.86■□□□□ 0.45
PRPF40B-209ENST00000548825 KDM5DQ9BY66 1539 aa17.85■□□□□ 0.45
PRPF40B-209ENST00000548825 DMRT2Q9Y5R5 561 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms