RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 ZNF687Q8N1G0 1237 aa9.18□□□□□ -0.94
CBX5-203ENST00000547872 NUTM2FA1L443 756 aa9.17□□□□□ -0.94
CBX5-203ENST00000547872 PTPREP23469 700 aa9.17□□□□□ -0.94
CBX5-203ENST00000547872 POTEB3A0JP26 581 aa9.16□□□□□ -0.94
CBX5-203ENST00000547872 PRIM1P49642 420 aaKnown RBP9.16□□□□□ -0.94
CBX5-203ENST00000547872 POTEBQ6S5H4 581 aa9.16□□□□□ -0.94
CBX5-203ENST00000547872 KCNK17Q96T54 332 aa9.16□□□□□ -0.94
CBX5-203ENST00000547872 UNC13AQ9UPW8 1703 aa9.15□□□□□ -0.94
CBX5-203ENST00000547872 PBX2P40425 430 aa9.15□□□□□ -0.94
CBX5-203ENST00000547872 TSR1Q2NL82 804 aaKnown RBP9.15□□□□□ -0.94
CBX5-203ENST00000547872 C6orf132Q5T0Z8 1188 aa9.15□□□□□ -0.94
CBX5-203ENST00000547872 GPIHBP1Q8IV16 184 aa9.15□□□□□ -0.94
CBX5-203ENST00000547872 ARHGAP33O14559 1287 aa9.13□□□□□ -0.95
CBX5-203ENST00000547872 CDHR5Q9HBB8 845 aa9.13□□□□□ -0.95
CBX5-203ENST00000547872 AXIN2Q9Y2T1 843 aa9.12□□□□□ -0.95
CBX5-203ENST00000547872 PPP1R3GB7ZBB8 358 aa9.11□□□□□ -0.95
CBX5-203ENST00000547872 PSEN2P49810 448 aa9.11□□□□□ -0.95
CBX5-203ENST00000547872 CERKQ8TCT0 537 aa9.11□□□□□ -0.95
CBX5-203ENST00000547872 FCHSD2O94868 740 aa9.1□□□□□ -0.95
CBX5-203ENST00000547872 POTEEQ6S8J3 1075 aa9.09□□□□□ -0.95
CBX5-203ENST00000547872 COL9A1P20849 921 aa9.08□□□□□ -0.96
CBX5-203ENST00000547872 CDAN1Q8IWY9 1227 aa9.08□□□□□ -0.96
CBX5-203ENST00000547872 PTGDRQ13258 359 aa9.07□□□□□ -0.96
CBX5-203ENST00000547872 HIC1Q14526 733 aa9.06□□□□□ -0.96
CBX5-203ENST00000547872 DMRTA1Q5VZB9 504 aa9.06□□□□□ -0.96
CBX5-203ENST00000547872 NACADO15069 1562 aa9.06□□□□□ -0.96
CBX5-203ENST00000547872 LSM11P83369 360 aaKnown RBP eCLIP9.05□□□□□ -0.96
CBX5-203ENST00000547872 NPDC1Q9NQX5 325 aaPredicted RBP9.05□□□□□ -0.96
CBX5-203ENST00000547872 GPR37O15354 613 aa9.04□□□□□ -0.96
CBX5-203ENST00000547872 ZBED2Q9BTP6 218 aa9.04□□□□□ -0.96
CBX5-203ENST00000547872 GNPATO15228 680 aa9.03□□□□□ -0.96
CBX5-203ENST00000547872 PRSS12P56730 875 aa9.03□□□□□ -0.96
CBX5-203ENST00000547872 ANKRD13DQ6ZTN6 518 aa9.03□□□□□ -0.96
CBX5-203ENST00000547872 ZC3H15Q8WU90 426 aaKnown RBP9.03□□□□□ -0.96
CBX5-203ENST00000547872 CDCA7LQ96GN5 454 aa9.03□□□□□ -0.96
CBX5-203ENST00000547872 RBM27Q9P2N5 1060 aaKnown RBP9.03□□□□□ -0.96
CBX5-203ENST00000547872 PROX2Q3B8N5 592 aa9.02□□□□□ -0.97
CBX5-203ENST00000547872 PADI6Q6TGC4 694 aa9.02□□□□□ -0.97
CBX5-203ENST00000547872 KRTAP3-3Q9BYR6 98 aa9.02□□□□□ -0.97
CBX5-203ENST00000547872 KRTAP3-2Q9BYR7 98 aa9.02□□□□□ -0.97
CBX5-203ENST00000547872 TRIM6-TRIM34B2RNG4 842 aa9.01□□□□□ -0.97
CBX5-203ENST00000547872 TK2O00142 265 aa9.01□□□□□ -0.97
CBX5-203ENST00000547872 SLC4A5Q9BY07 1137 aa9.01□□□□□ -0.97
CBX5-203ENST00000547872 BICRAQ9NZM4 1560 aa9.01□□□□□ -0.97
CBX5-203ENST00000547872 PCDH10Q9P2E7 1040 aa9.01□□□□□ -0.97
CBX5-203ENST00000547872 ADGRD1Q6QNK2 874 aa9□□□□□ -0.97
CBX5-203ENST00000547872 PACS2Q86VP3 889 aa9□□□□□ -0.97
CBX5-203ENST00000547872 VPS9D1Q9Y2B5 631 aa9□□□□□ -0.97
CBX5-203ENST00000547872 CECR2Q9BXF3 1484 aa9□□□□□ -0.97
CBX5-203ENST00000547872 CC2D2AQ9P2K1 1620 aa8.99□□□□□ -0.97
CBX5-203ENST00000547872 ONECUT3O60422 494 aaPredicted RBP8.99□□□□□ -0.97
CBX5-203ENST00000547872 TPRNQ4KMQ1 711 aa8.99□□□□□ -0.97
CBX5-203ENST00000547872 KRI1Q8N9T8 703 aaKnown RBP8.99□□□□□ -0.97
CBX5-203ENST00000547872 TSKSQ9UJT2 592 aa8.99□□□□□ -0.97
CBX5-203ENST00000547872 NBPF26B4DH59 902 aa8.98□□□□□ -0.97
CBX5-203ENST00000547872 ZMYND10O75800 440 aa8.98□□□□□ -0.97
CBX5-203ENST00000547872 STAC3Q96MF2 364 aa8.98□□□□□ -0.97
CBX5-203ENST00000547872 RABGEF1Q9UJ41 708 aa8.98□□□□□ -0.97
CBX5-203ENST00000547872 FECHP22830 423 aa8.97□□□□□ -0.97
CBX5-203ENST00000547872 NBPF3Q9H094 633 aa8.97□□□□□ -0.97
CBX5-203ENST00000547872 KIAA1468Q9P260 1216 aa8.97□□□□□ -0.97
CBX5-203ENST00000547872 MAP2K5Q13163 448 aa8.96□□□□□ -0.98
CBX5-203ENST00000547872 BARGINQ6ZT62 677 aa8.96□□□□□ -0.98
CBX5-203ENST00000547872 TTC13Q8NBP0 860 aa8.96□□□□□ -0.98
CBX5-203ENST00000547872 FAM198AQ9UFP1 575 aa8.95□□□□□ -0.98
CBX5-203ENST00000547872 PNMA3Q9UL41 463 aa8.95□□□□□ -0.98
CBX5-203ENST00000547872 MINK1Q8N4C8 1332 aaPredicted RBP8.94□□□□□ -0.98
CBX5-203ENST00000547872 NUDT18Q6ZVK8 323 aa8.93□□□□□ -0.98
CBX5-203ENST00000547872 MRPL50Q8N5N7 158 aaKnown RBP8.93□□□□□ -0.98
CBX5-203ENST00000547872 TATDN2Q93075 761 aa8.93□□□□□ -0.98
CBX5-203ENST00000547872 ADGRG1Q9Y653 693 aa8.93□□□□□ -0.98
CBX5-203ENST00000547872 OATP04181 439 aa8.92□□□□□ -0.98
CBX5-203ENST00000547872 FAM161AQ3B820 660 aa8.92□□□□□ -0.98
CBX5-203ENST00000547872 RBM46Q8TBY0 533 aaKnown RBP8.92□□□□□ -0.98
CBX5-203ENST00000547872 SEPT9Q9UHD8 586 aaPredicted RBP8.92□□□□□ -0.98
CBX5-203ENST00000547872 BHMG1C9JSJ3 638 aaPredicted RBP8.91□□□□□ -0.98
CBX5-203ENST00000547872 SMAPO00193 183 aa8.91□□□□□ -0.98
CBX5-203ENST00000547872 IRF6O14896 467 aa8.91□□□□□ -0.98
CBX5-203ENST00000547872 HRO43593 1189 aa8.91□□□□□ -0.98
CBX5-203ENST00000547872 CCDC102AQ96A19 550 aa8.91□□□□□ -0.98
CBX5-203ENST00000547872 GOLGA8CPA6NN73 597 aa8.9□□□□□ -0.98
CBX5-203ENST00000547872 LAPTM4BQ86VI4 370 aa8.9□□□□□ -0.98
CBX5-203ENST00000547872 FAM98CQ17RN3 349 aaKnown RBP8.89□□□□□ -0.99
CBX5-203ENST00000547872 SLC24A3Q9HC58 644 aa8.89□□□□□ -0.99
CBX5-203ENST00000547872 C3orf80F5H4A9 247 aa8.88□□□□□ -0.99
CBX5-203ENST00000547872 PRKCSHP14314 528 aaPredicted RBP8.88□□□□□ -0.99
CBX5-203ENST00000547872 METTL3Q86U44 580 aaKnown RBP8.88□□□□□ -0.99
CBX5-203ENST00000547872 PXYLP1Q8TE99 480 aa8.88□□□□□ -0.99
CBX5-203ENST00000547872 AK7Q96M32 723 aa8.88□□□□□ -0.99
CBX5-203ENST00000547872 EYA1Q99502 592 aa8.87□□□□□ -0.99
CBX5-203ENST00000547872 DNAJB2P25686 324 aa8.86□□□□□ -0.99
CBX5-203ENST00000547872 HDGFP51858 240 aaKnown RBP8.86□□□□□ -0.99
CBX5-203ENST00000547872 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.85□□□□□ -0.99
CBX5-203ENST00000547872 RCCD1A6NED2 376 aa8.85□□□□□ -0.99
CBX5-203ENST00000547872 ZFRQ96KR1 1074 aaKnown RBP8.85□□□□□ -0.99
CBX5-203ENST00000547872 EIF4G1Q04637 1599 aaKnown RBP8.85□□□□□ -0.99
CBX5-203ENST00000547872 SCRIBQ14160 1630 aa8.84□□□□□ -0.99
CBX5-203ENST00000547872 ANKK1Q8NFD2 765 aa8.84□□□□□ -0.99
CBX5-203ENST00000547872 MYT1LQ9UL68 1186 aa8.84□□□□□ -0.99
CBX5-203ENST00000547872 SPNS2Q8IVW8 549 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms