RNA–Protein interactions for RNA: ENST00000547539.1

FAM216A-204, Transcript of family with sequence similarity 216 member A, humanhuman

TSL 2

Gene FAM216A, Length 1,384 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM216A-204ENST00000547539 DCAF1Q9Y4B6 1507 aa11.6□□□□□ -0.55
FAM216A-204ENST00000547539 MMRN1Q13201 1228 aa11.59□□□□□ -0.55
FAM216A-204ENST00000547539 ZCCHC6Q5VYS8 1495 aaKnown RBP11.58□□□□□ -0.56
FAM216A-204ENST00000547539 SPDYE16A6NNV3 312 aaPredicted RBP11.58□□□□□ -0.56
FAM216A-204ENST00000547539 PHF14O94880 888 aa11.58□□□□□ -0.56
FAM216A-204ENST00000547539 NBR1Q14596 966 aa11.58□□□□□ -0.56
FAM216A-204ENST00000547539 ARIH1Q9Y4X5 557 aaPredicted RBP11.58□□□□□ -0.56
FAM216A-204ENST00000547539 EIF4G1Q04637 1599 aaKnown RBP11.58□□□□□ -0.56
FAM216A-204ENST00000547539 TYW1BQ6NUM6 668 aa11.57□□□□□ -0.56
FAM216A-204ENST00000547539 PTPREP23469 700 aa11.56□□□□□ -0.56
FAM216A-204ENST00000547539 PRIM1P49642 420 aaKnown RBP11.56□□□□□ -0.56
FAM216A-204ENST00000547539 PTGER2P43116 358 aa11.55□□□□□ -0.56
FAM216A-204ENST00000547539 ARHGEF1Q92888 912 aaKnown RBP11.54□□□□□ -0.56
FAM216A-204ENST00000547539 MLLT3P42568 568 aaPredicted RBP11.54□□□□□ -0.56
FAM216A-204ENST00000547539 ADGRD1Q6QNK2 874 aa11.54□□□□□ -0.56
FAM216A-204ENST00000547539 KCNH8Q96L42 1107 aa11.54□□□□□ -0.56
FAM216A-204ENST00000547539 COL9A1P20849 921 aa11.53□□□□□ -0.56
FAM216A-204ENST00000547539 TSR1Q2NL82 804 aaKnown RBP11.53□□□□□ -0.56
FAM216A-204ENST00000547539 SCRIBQ14160 1630 aa11.52□□□□□ -0.56
FAM216A-204ENST00000547539 EPAS1Q99814 870 aa11.52□□□□□ -0.57
FAM216A-204ENST00000547539 MAP3K7O43318 606 aa11.51□□□□□ -0.57
FAM216A-204ENST00000547539 P3H3Q8IVL6 736 aa11.51□□□□□ -0.57
FAM216A-204ENST00000547539 FBXW7Q969H0 707 aa11.51□□□□□ -0.57
FAM216A-204ENST00000547539 C6orf132Q5T0Z8 1188 aa11.5□□□□□ -0.57
FAM216A-204ENST00000547539 SEMA3EO15041 775 aa11.49□□□□□ -0.57
FAM216A-204ENST00000547539 EN1Q05925 392 aaPredicted RBP11.49□□□□□ -0.57
FAM216A-204ENST00000547539 PROX2Q3B8N5 592 aa11.49□□□□□ -0.57
FAM216A-204ENST00000547539 MYT1LQ9UL68 1186 aa11.49□□□□□ -0.57
FAM216A-204ENST00000547539 VSIG10Q8N0Z9 540 aa11.48□□□□□ -0.57
FAM216A-204ENST00000547539 ZBED2Q9BTP6 218 aa11.48□□□□□ -0.57
FAM216A-204ENST00000547539 VPS9D1Q9Y2B5 631 aa11.48□□□□□ -0.57
FAM216A-204ENST00000547539 OSBPP22059 807 aa11.47□□□□□ -0.57
FAM216A-204ENST00000547539 CDHR5Q9HBB8 845 aa11.47□□□□□ -0.57
FAM216A-204ENST00000547539 PPP1R3GB7ZBB8 358 aa11.46□□□□□ -0.57
FAM216A-204ENST00000547539 TK2O00142 265 aa11.45□□□□□ -0.58
FAM216A-204ENST00000547539 HRO43593 1189 aa11.45□□□□□ -0.58
FAM216A-204ENST00000547539 SLC24A1O60721 1099 aa11.45□□□□□ -0.58
FAM216A-204ENST00000547539 RNF166Q96A37 237 aaPredicted RBP11.45□□□□□ -0.58
FAM216A-204ENST00000547539 SLC4A5Q9BY07 1137 aa11.39□□□□□ -0.59
FAM216A-204ENST00000547539 BHMG1C9JSJ3 638 aaPredicted RBP11.37□□□□□ -0.59
FAM216A-204ENST00000547539 STAC3Q96MF2 364 aa11.37□□□□□ -0.59
FAM216A-204ENST00000547539 KCTD12Q96CX2 325 aaKnown RBP11.36□□□□□ -0.59
FAM216A-204ENST00000547539 KIAA1468Q9P260 1216 aa11.36□□□□□ -0.59
FAM216A-204ENST00000547539 SEPT9Q9UHD8 586 aaPredicted RBP11.35□□□□□ -0.59
FAM216A-204ENST00000547539 TSKSQ9UJT2 592 aa11.35□□□□□ -0.59
FAM216A-204ENST00000547539 TRIM6-TRIM34B2RNG4 842 aa11.34□□□□□ -0.59
FAM216A-204ENST00000547539 FAM198AQ9UFP1 575 aa11.34□□□□□ -0.59
FAM216A-204ENST00000547539 TESPA1A2RU30 521 aaPredicted RBP11.33□□□□□ -0.6
FAM216A-204ENST00000547539 RABGEF1Q9UJ41 708 aa11.33□□□□□ -0.6
FAM216A-204ENST00000547539 C3orf80F5H4A9 247 aa11.32□□□□□ -0.6
FAM216A-204ENST00000547539 RBM26Q5T8P6 1007 aaKnown RBP11.32□□□□□ -0.6
FAM216A-204ENST00000547539 MRPL50Q8N5N7 158 aaKnown RBP11.32□□□□□ -0.6
FAM216A-204ENST00000547539 CDCA7LQ96GN5 454 aa11.32□□□□□ -0.6
FAM216A-204ENST00000547539 NPDC1Q9NQX5 325 aaPredicted RBP11.32□□□□□ -0.6
FAM216A-204ENST00000547539 NUTM2FA1L443 756 aa11.31□□□□□ -0.6
FAM216A-204ENST00000547539 SMAPO00193 183 aa11.31□□□□□ -0.6
FAM216A-204ENST00000547539 NBPF3Q9H094 633 aa11.3□□□□□ -0.6
FAM216A-204ENST00000547539 PRSS12P56730 875 aa11.29□□□□□ -0.6
FAM216A-204ENST00000547539 PADI6Q6TGC4 694 aa11.28□□□□□ -0.6
FAM216A-204ENST00000547539 GOLGA8CPA6NN73 597 aa11.28□□□□□ -0.6
FAM216A-204ENST00000547539 PTPN5P54829 565 aa11.26□□□□□ -0.61
FAM216A-204ENST00000547539 WNT2BQ93097 391 aa11.26□□□□□ -0.61
FAM216A-204ENST00000547539 PTGDRQ13258 359 aa11.25□□□□□ -0.61
FAM216A-204ENST00000547539 CERKQ8TCT0 537 aa11.25□□□□□ -0.61
FAM216A-204ENST00000547539 CUX2O14529 1486 aa11.25□□□□□ -0.61
FAM216A-204ENST00000547539 PACS2Q86VP3 889 aa11.24□□□□□ -0.61
FAM216A-204ENST00000547539 ONECUT3O60422 494 aaPredicted RBP11.23□□□□□ -0.61
FAM216A-204ENST00000547539 ZFRQ96KR1 1074 aaKnown RBP11.23□□□□□ -0.61
FAM216A-204ENST00000547539 PNMA3Q9UL41 463 aa11.23□□□□□ -0.61
FAM216A-204ENST00000547539 BCAMP50895 628 aa11.22□□□□□ -0.61
FAM216A-204ENST00000547539 FAM161AQ3B820 660 aa11.22□□□□□ -0.61
FAM216A-204ENST00000547539 THSD4Q6ZMP0 1018 aa11.22□□□□□ -0.61
FAM216A-204ENST00000547539 NUDT18Q6ZVK8 323 aa11.21□□□□□ -0.61
FAM216A-204ENST00000547539 TATDN2Q93075 761 aa11.21□□□□□ -0.61
FAM216A-204ENST00000547539 SMYD5Q6GMV2 418 aa11.2□□□□□ -0.62
FAM216A-204ENST00000547539 FAM98CQ17RN3 349 aaKnown RBP11.19□□□□□ -0.62
FAM216A-204ENST00000547539 NBPF26B4DH59 902 aa11.18□□□□□ -0.62
FAM216A-204ENST00000547539 LAPTM4BQ86VI4 370 aa11.18□□□□□ -0.62
FAM216A-204ENST00000547539 TTC13Q8NBP0 860 aa11.18□□□□□ -0.62
FAM216A-204ENST00000547539 ANKK1Q8NFD2 765 aa11.18□□□□□ -0.62
FAM216A-204ENST00000547539 FECHP22830 423 aa11.17□□□□□ -0.62
FAM216A-204ENST00000547539 HCSTQ9UBK5 93 aa11.17□□□□□ -0.62
FAM216A-204ENST00000547539 FCHSD2O94868 740 aa11.16□□□□□ -0.62
FAM216A-204ENST00000547539 RBM27Q9P2N5 1060 aaKnown RBP11.16□□□□□ -0.62
FAM216A-204ENST00000547539 GPR37O15354 613 aa11.16□□□□□ -0.62
FAM216A-204ENST00000547539 SAMD7Q7Z3H4 446 aa11.15□□□□□ -0.63
FAM216A-204ENST00000547539 ERCC6Q03468 1493 aa11.14□□□□□ -0.63
FAM216A-204ENST00000547539 GPIHBP1Q8IV16 184 aa11.14□□□□□ -0.63
FAM216A-204ENST00000547539 SOWAHBA6NEL2 793 aa11.13□□□□□ -0.63
FAM216A-204ENST00000547539 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.12□□□□□ -0.63
FAM216A-204ENST00000547539 NCAPD3P42695 1498 aa11.12□□□□□ -0.63
FAM216A-204ENST00000547539 RNF40O75150 1001 aa11.11□□□□□ -0.63
FAM216A-204ENST00000547539 LRCH3Q96II8 777 aa11.11□□□□□ -0.63
FAM216A-204ENST00000547539 WBP1LQ9NX94 342 aa11.11□□□□□ -0.63
FAM216A-204ENST00000547539 HPS5Q9UPZ3 1129 aa11.11□□□□□ -0.63
FAM216A-204ENST00000547539 ADGRG1Q9Y653 693 aa11.11□□□□□ -0.63
FAM216A-204ENST00000547539 EYA1Q99502 592 aa11.1□□□□□ -0.63
FAM216A-204ENST00000547539 HIC1Q14526 733 aa11.09□□□□□ -0.63
FAM216A-204ENST00000547539 GNPATO15228 680 aa11.08□□□□□ -0.64
FAM216A-204ENST00000547539 SWT1Q5T5J6 900 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms