RNA–Protein interactions for RNA: ENST00000547461.2

TCTN1-220, Transcript of tectonic family member 1, humanhuman

TSL 3

Gene TCTN1, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN1-220ENST00000547461 ABCC10Q5T3U5 1492 aa11.51□□□□□ -0.57
TCTN1-220ENST00000547461 SHROOM2Q13796 1616 aa11.49□□□□□ -0.57
TCTN1-220ENST00000547461 RTN4Q9NQC3 1192 aaKnown RBP11.49□□□□□ -0.57
TCTN1-220ENST00000547461 C2orf72A6NCS6 295 aa11.48□□□□□ -0.57
TCTN1-220ENST00000547461 BIVM-ERCC5R4GMW8 1640 aa11.48□□□□□ -0.57
TCTN1-220ENST00000547461 SOCS7O14512 581 aa11.47□□□□□ -0.57
TCTN1-220ENST00000547461 MARVELD3Q96A59 401 aa11.47□□□□□ -0.57
TCTN1-220ENST00000547461 HOXB1P14653 301 aaPredicted RBP11.46□□□□□ -0.57
TCTN1-220ENST00000547461 ZNF710Q8N1W2 664 aa11.46□□□□□ -0.57
TCTN1-220ENST00000547461 ZSWIM6Q9HCJ5 1215 aa11.46□□□□□ -0.57
TCTN1-220ENST00000547461 RIMBP2O15034 1052 aa11.45□□□□□ -0.58
TCTN1-220ENST00000547461 GTPBP6O43824 516 aaPredicted RBP11.45□□□□□ -0.58
TCTN1-220ENST00000547461 DIP2BQ9P265 1576 aa11.44□□□□□ -0.58
TCTN1-220ENST00000547461 EMP3P54852 163 aa11.43□□□□□ -0.58
TCTN1-220ENST00000547461 TMC2Q8TDI7 906 aa11.43□□□□□ -0.58
TCTN1-220ENST00000547461 IGF1RP08069 1367 aa11.42□□□□□ -0.58
TCTN1-220ENST00000547461 CDAN1Q8IWY9 1227 aa11.42□□□□□ -0.58
TCTN1-220ENST00000547461 PTPRGP23470 1445 aa11.42□□□□□ -0.58
TCTN1-220ENST00000547461 KIAA0586Q9BVV6 1533 aa11.41□□□□□ -0.58
TCTN1-220ENST00000547461 GPR153Q6NV75 609 aa11.41□□□□□ -0.58
TCTN1-220ENST00000547461 KIF27Q86VH2 1401 aa11.41□□□□□ -0.58
TCTN1-220ENST00000547461 RUSC2Q8N2Y8 1516 aa11.4□□□□□ -0.58
TCTN1-220ENST00000547461 DISP3Q9P2K9 1392 aa11.4□□□□□ -0.59
TCTN1-220ENST00000547461 MAPKBP1O60336 1514 aa11.4□□□□□ -0.59
TCTN1-220ENST00000547461 ILDR2Q71H61 639 aa11.39□□□□□ -0.59
TCTN1-220ENST00000547461 SLC34A2O95436 690 aa11.38□□□□□ -0.59
TCTN1-220ENST00000547461 GPHNQ9NQX3 736 aaPredicted RBP11.38□□□□□ -0.59
TCTN1-220ENST00000547461 CARMIL1Q5VZK9 1371 aa11.38□□□□□ -0.59
TCTN1-220ENST00000547461 ADCY10Q96PN6 1610 aa11.38□□□□□ -0.59
TCTN1-220ENST00000547461 CARMIL2Q6F5E8 1435 aa11.36□□□□□ -0.59
TCTN1-220ENST00000547461 POTEB3A0JP26 581 aa11.36□□□□□ -0.59
TCTN1-220ENST00000547461 FOXK1P85037 733 aa11.36□□□□□ -0.59
TCTN1-220ENST00000547461 POTEBQ6S5H4 581 aa11.36□□□□□ -0.59
TCTN1-220ENST00000547461 HS3ST6Q96QI5 342 aa11.36□□□□□ -0.59
TCTN1-220ENST00000547461 TNIKQ9UKE5 1360 aa11.36□□□□□ -0.59
TCTN1-220ENST00000547461 FAM205CA6NFA0 338 aa11.35□□□□□ -0.59
TCTN1-220ENST00000547461 BBXQ8WY36 941 aaPredicted RBP11.34□□□□□ -0.59
TCTN1-220ENST00000547461 CRISPLD2Q9H0B8 497 aa11.33□□□□□ -0.6
TCTN1-220ENST00000547461 ARSIQ5FYB1 569 aa11.32□□□□□ -0.6
TCTN1-220ENST00000547461 ASXL2Q76L83 1435 aa11.32□□□□□ -0.6
TCTN1-220ENST00000547461 PLB1Q6P1J6 1458 aa11.32□□□□□ -0.6
TCTN1-220ENST00000547461 ABCC2Q92887 1545 aa11.3□□□□□ -0.6
TCTN1-220ENST00000547461 DSG2Q14126 1118 aa11.3□□□□□ -0.6
TCTN1-220ENST00000547461 CUL7Q14999 1698 aa11.3□□□□□ -0.6
TCTN1-220ENST00000547461 PLPP6Q8IY26 295 aa11.29□□□□□ -0.6
TCTN1-220ENST00000547461 ERBB3P21860 1342 aa11.29□□□□□ -0.6
TCTN1-220ENST00000547461 NCKAP5LQ9HCH0 1330 aa11.29□□□□□ -0.6
TCTN1-220ENST00000547461 UACAQ9BZF9 1416 aa11.28□□□□□ -0.6
TCTN1-220ENST00000547461 PLSCR2Q9NRY7 297 aa11.28□□□□□ -0.6
TCTN1-220ENST00000547461 PCDHGA4Q9Y5G9 962 aa11.28□□□□□ -0.6
TCTN1-220ENST00000547461 PTCD2Q8WV60 388 aaKnown RBP11.27□□□□□ -0.61
TCTN1-220ENST00000547461 KHSRPQ92945 711 aaKnown RBP eCLIP11.27□□□□□ -0.61
TCTN1-220ENST00000547461 PDE4AP27815 886 aa11.25□□□□□ -0.61
TCTN1-220ENST00000547461 VARS2Q5ST30 1063 aaKnown RBP11.25□□□□□ -0.61
TCTN1-220ENST00000547461 IQGAP2Q13576 1575 aa11.24□□□□□ -0.61
TCTN1-220ENST00000547461 KCNH8Q96L42 1107 aa11.24□□□□□ -0.61
TCTN1-220ENST00000547461 KRTAP3-3Q9BYR6 98 aa11.24□□□□□ -0.61
TCTN1-220ENST00000547461 KRTAP3-2Q9BYR7 98 aa11.24□□□□□ -0.61
TCTN1-220ENST00000547461 UHRF1BP1LA0JNW5 1464 aa11.24□□□□□ -0.61
TCTN1-220ENST00000547461 ZNF316A6NFI3 1004 aaPredicted RBP11.23□□□□□ -0.61
TCTN1-220ENST00000547461 NUDT7P0C024 238 aa11.22□□□□□ -0.61
TCTN1-220ENST00000547461 PPP1R15BQ5SWA1 713 aa11.22□□□□□ -0.61
TCTN1-220ENST00000547461 PPRC1Q5VV67 1664 aaKnown RBP11.21□□□□□ -0.61
TCTN1-220ENST00000547461 GLI2P10070 1586 aa11.21□□□□□ -0.61
TCTN1-220ENST00000547461 EPRSP07814 1512 aaKnown RBP11.21□□□□□ -0.61
TCTN1-220ENST00000547461 TEX14Q8IWB6 1497 aa11.21□□□□□ -0.61
TCTN1-220ENST00000547461 COL17A1Q9UMD9 1497 aaPredicted RBP11.21□□□□□ -0.61
TCTN1-220ENST00000547461 MFSD10Q14728 455 aa11.21□□□□□ -0.61
TCTN1-220ENST00000547461 DISP1Q96F81 1524 aa11.2□□□□□ -0.62
TCTN1-220ENST00000547461 RAPGEF2Q9Y4G8 1499 aa11.2□□□□□ -0.62
TCTN1-220ENST00000547461 CADPS2Q86UW7 1296 aa11.2□□□□□ -0.62
TCTN1-220ENST00000547461 FAM9AQ8IZU1 332 aaPredicted RBP11.2□□□□□ -0.62
TCTN1-220ENST00000547461 ZNF687Q8N1G0 1237 aa11.2□□□□□ -0.62
TCTN1-220ENST00000547461 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.2□□□□□ -0.62
TCTN1-220ENST00000547461 SPRYD3Q8NCJ5 442 aa11.19□□□□□ -0.62
TCTN1-220ENST00000547461 CERKQ8TCT0 537 aa11.19□□□□□ -0.62
TCTN1-220ENST00000547461 ARID3CA6NKF2 412 aa11.18□□□□□ -0.62
TCTN1-220ENST00000547461 OXER1Q8TDS5 423 aa11.18□□□□□ -0.62
TCTN1-220ENST00000547461 LARP6Q9BRS8 491 aaKnown RBP11.18□□□□□ -0.62
TCTN1-220ENST00000547461 KDM5BQ9UGL1 1544 aa11.18□□□□□ -0.62
TCTN1-220ENST00000547461 DDX27Q96GQ7 796 aaKnown RBP11.17□□□□□ -0.62
TCTN1-220ENST00000547461 UGGT2Q9NYU1 1516 aa11.16□□□□□ -0.62
TCTN1-220ENST00000547461 TBC1D12O60347 775 aa11.16□□□□□ -0.62
TCTN1-220ENST00000547461 LHX6Q9UPM6 363 aa11.16□□□□□ -0.62
TCTN1-220ENST00000547461 WDR7Q9Y4E6 1490 aa11.16□□□□□ -0.62
TCTN1-220ENST00000547461 CD109Q6YHK3 1445 aa11.16□□□□□ -0.62
TCTN1-220ENST00000547461 SPNS2Q8IVW8 549 aa11.15□□□□□ -0.62
TCTN1-220ENST00000547461 SPATA31D1Q6ZQQ2 1576 aa11.14□□□□□ -0.63
TCTN1-220ENST00000547461 P3H3Q8IVL6 736 aa11.13□□□□□ -0.63
TCTN1-220ENST00000547461 ZCCHC11Q5TAX3 1644 aaKnown RBP11.13□□□□□ -0.63
TCTN1-220ENST00000547461 KIAA0556O60303 1618 aa11.12□□□□□ -0.63
TCTN1-220ENST00000547461 GOLGA3Q08378 1498 aa11.12□□□□□ -0.63
TCTN1-220ENST00000547461 MAP3K4Q9Y6R4 1608 aa11.11□□□□□ -0.63
TCTN1-220ENST00000547461 PSDA5PKW4 1024 aaPredicted RBP11.11□□□□□ -0.63
TCTN1-220ENST00000547461 PTPRMP28827 1452 aa11.09□□□□□ -0.63
TCTN1-220ENST00000547461 PAXIP1Q6ZW49 1069 aaPredicted RBP11.09□□□□□ -0.63
TCTN1-220ENST00000547461 UPF1Q92900 1129 aaKnown RBP eCLIP11.09□□□□□ -0.63
TCTN1-220ENST00000547461 KIF21BO75037 1637 aa11.09□□□□□ -0.63
TCTN1-220ENST00000547461 PCF11O94913 1555 aaKnown RBP11.08□□□□□ -0.64
TCTN1-220ENST00000547461 PBX2P40425 430 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms