RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 RNF17Q9BXT8 1623 aaKnown RBP16.26■□□□□ 0.19
BEST3-208ENST00000547208 SOCS7O14512 581 aa16.25■□□□□ 0.19
BEST3-208ENST00000547208 EIF2AK4Q9P2K8 1649 aaKnown RBP16.25■□□□□ 0.19
BEST3-208ENST00000547208 FAM135AQ9P2D6 1515 aa16.24■□□□□ 0.19
BEST3-208ENST00000547208 GGT6Q6P531 493 aa16.24■□□□□ 0.19
BEST3-208ENST00000547208 PTPRKQ15262 1439 aa16.24■□□□□ 0.19
BEST3-208ENST00000547208 KDM5DQ9BY66 1539 aa16.23■□□□□ 0.19
BEST3-208ENST00000547208 DNMT1P26358 1616 aaKnown RBP16.23■□□□□ 0.19
BEST3-208ENST00000547208 TCOF1Q13428 1488 aaKnown RBP16.22■□□□□ 0.19
BEST3-208ENST00000547208 MROH1Q8NDA8 1641 aa16.21■□□□□ 0.19
BEST3-208ENST00000547208 TSPY4P0CV99 314 aa16.21■□□□□ 0.19
BEST3-208ENST00000547208 TSPY10P0CW01 314 aa16.21■□□□□ 0.19
BEST3-208ENST00000547208 ZC3H13Q5T200 1668 aaKnown RBP16.21■□□□□ 0.18
BEST3-208ENST00000547208 FGD6Q6ZV73 1430 aa16.2■□□□□ 0.18
BEST3-208ENST00000547208 LTBP4Q8N2S1 1624 aa16.2■□□□□ 0.18
BEST3-208ENST00000547208 APLP2Q06481 763 aa16.2■□□□□ 0.18
BEST3-208ENST00000547208 SHANK2Q9UPX8 1470 aa16.2■□□□□ 0.18
BEST3-208ENST00000547208 CEP170BQ9Y4F5 1589 aaPredicted RBP16.2■□□□□ 0.18
BEST3-208ENST00000547208 KIF3BO15066 747 aa16.19■□□□□ 0.18
BEST3-208ENST00000547208 CAMSAP1Q5T5Y3 1602 aa16.19■□□□□ 0.18
BEST3-208ENST00000547208 ABCC5O15440 1437 aa16.19■□□□□ 0.18
BEST3-208ENST00000547208 CEP152O94986 1710 aa16.18■□□□□ 0.18
BEST3-208ENST00000547208 NCOA1Q15788 1441 aa16.18■□□□□ 0.18
BEST3-208ENST00000547208 PZPP20742 1482 aa16.17■□□□□ 0.18
BEST3-208ENST00000547208 DUOX2Q9NRD8 1548 aa16.17■□□□□ 0.18
BEST3-208ENST00000547208 SPATA31D1Q6ZQQ2 1576 aa16.17■□□□□ 0.18
BEST3-208ENST00000547208 DAPK1P53355 1430 aa16.16■□□□□ 0.18
BEST3-208ENST00000547208 ABCC3O15438 1527 aa16.15■□□□□ 0.18
BEST3-208ENST00000547208 DEPDC5O75140 1603 aa16.15■□□□□ 0.18
BEST3-208ENST00000547208 PTPRTO14522 1441 aa16.14■□□□□ 0.17
BEST3-208ENST00000547208 PRDM15P57071 1507 aaPredicted RBP16.13■□□□□ 0.17
BEST3-208ENST00000547208 CFAP65Q6ZU64 1925 aaKnown RBP16.12■□□□□ 0.17
BEST3-208ENST00000547208 A2ML1A8K2U0 1454 aa16.12■□□□□ 0.17
BEST3-208ENST00000547208 PLA2R1Q13018 1463 aa16.12■□□□□ 0.17
BEST3-208ENST00000547208 POLR1AO95602 1720 aaPredicted RBP16.12■□□□□ 0.17
BEST3-208ENST00000547208 NCKAP5LQ9HCH0 1330 aa16.12■□□□□ 0.17
BEST3-208ENST00000547208 DMRT2Q9Y5R5 561 aa16.11■□□□□ 0.17
BEST3-208ENST00000547208 WASHC2CQ9Y4E1 1318 aa16.11■□□□□ 0.17
BEST3-208ENST00000547208 KIF15Q9NS87 1388 aa16.11■□□□□ 0.17
BEST3-208ENST00000547208 ERBINQ96RT1 1412 aa16.11■□□□□ 0.17
BEST3-208ENST00000547208 FBXO31Q5XUX0 539 aaPredicted RBP16.1■□□□□ 0.17
BEST3-208ENST00000547208 ZNF335Q9H4Z2 1342 aaPredicted RBP16.09■□□□□ 0.17
BEST3-208ENST00000547208 TNRQ92752 1358 aa16.09■□□□□ 0.17
BEST3-208ENST00000547208 ADGRL2O95490 1459 aa16.07■□□□□ 0.16
BEST3-208ENST00000547208 NEURL4Q96JN8 1562 aa16.06■□□□□ 0.16
BEST3-208ENST00000547208 RRP7BPQ9NSQ0 103 aa16.06■□□□□ 0.16
BEST3-208ENST00000547208 VWDEQ8N2E2 1590 aa16.05■□□□□ 0.16
BEST3-208ENST00000547208 ERVK-7P63135 1459 aa16.05■□□□□ 0.16
BEST3-208ENST00000547208 NLRP1Q9C000 1473 aa16.05■□□□□ 0.16
BEST3-208ENST00000547208 ANKRD30AQ9BXX3 1397 aa16.03■□□□□ 0.16
BEST3-208ENST00000547208 UBR1Q8IWV7 1749 aa16.03■□□□□ 0.16
BEST3-208ENST00000547208 UGGT1Q9NYU2 1555 aa16.02■□□□□ 0.16
BEST3-208ENST00000547208 ARHGAP31Q2M1Z3 1444 aa16.02■□□□□ 0.15
BEST3-208ENST00000547208 LMTK2Q8IWU2 1503 aa16.01■□□□□ 0.15
BEST3-208ENST00000547208 PKD2Q13563 968 aa16.01■□□□□ 0.15
BEST3-208ENST00000547208 CHIC2Q9UKJ5 165 aa16.01■□□□□ 0.15
BEST3-208ENST00000547208 UBAP1LF5GYI3 381 aa15.99■□□□□ 0.15
BEST3-208ENST00000547208 MSH5O43196 834 aa15.99■□□□□ 0.15
BEST3-208ENST00000547208 FAM50AQ14320 339 aaKnown RBP15.98■□□□□ 0.15
BEST3-208ENST00000547208 EFCAB6Q5THR3 1501 aa15.97■□□□□ 0.15
BEST3-208ENST00000547208 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.97■□□□□ 0.15
BEST3-208ENST00000547208 PIK3C2BO00750 1634 aa15.97■□□□□ 0.15
BEST3-208ENST00000547208 IQSEC2Q5JU85 1478 aa15.97■□□□□ 0.15
BEST3-208ENST00000547208 UNC13BO14795 1591 aa15.96■□□□□ 0.15
BEST3-208ENST00000547208 KDM5AP29375 1690 aaKnown RBP15.96■□□□□ 0.15
BEST3-208ENST00000547208 IQGAP1P46940 1657 aa15.96■□□□□ 0.15
BEST3-208ENST00000547208 MED14O60244 1454 aa15.96■□□□□ 0.14
BEST3-208ENST00000547208 SYNMO15061 1565 aa15.95■□□□□ 0.14
BEST3-208ENST00000547208 GCC2Q8IWJ2 1684 aa15.95■□□□□ 0.14
BEST3-208ENST00000547208 ANKRD50Q9ULJ7 1429 aa15.94■□□□□ 0.14
BEST3-208ENST00000547208 TET3O43151 1660 aa15.94■□□□□ 0.14
BEST3-208ENST00000547208 KANK1Q14678 1352 aa15.93■□□□□ 0.14
BEST3-208ENST00000547208 HSPA1LP34931 641 aa15.93■□□□□ 0.14
BEST3-208ENST00000547208 THEMISQ8N1K5 641 aaPredicted RBP15.93■□□□□ 0.14
BEST3-208ENST00000547208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.93■□□□□ 0.14
BEST3-208ENST00000547208 STRCP1A6NGW2 1772 aa15.92■□□□□ 0.14
BEST3-208ENST00000547208 ROCK1Q13464 1354 aa15.91■□□□□ 0.14
BEST3-208ENST00000547208 SLIT1O75093 1534 aa15.91■□□□□ 0.14
BEST3-208ENST00000547208 PPARGC1BQ86YN6 1023 aaKnown RBP15.91■□□□□ 0.14
BEST3-208ENST00000547208 ARHGAP23Q9P227 1491 aa15.91■□□□□ 0.14
BEST3-208ENST00000547208 MYO5BQ9ULV0 1848 aa15.9■□□□□ 0.14
BEST3-208ENST00000547208 PIP4K2BP78356 416 aa15.9■□□□□ 0.14
BEST3-208ENST00000547208 ANKLE2Q86XL3 938 aa15.9■□□□□ 0.14
BEST3-208ENST00000547208 NOS1P29475 1434 aa15.9■□□□□ 0.14
BEST3-208ENST00000547208 IQGAP3Q86VI3 1631 aa15.9■□□□□ 0.14
BEST3-208ENST00000547208 E9PCH4 1651 aa15.89■□□□□ 0.13
BEST3-208ENST00000547208 NPHP4O75161 1426 aaPredicted RBP15.89■□□□□ 0.13
BEST3-208ENST00000547208 RPRD2Q5VT52 1461 aaKnown RBP15.88■□□□□ 0.13
BEST3-208ENST00000547208 CPS1P31327 1500 aa15.87■□□□□ 0.13
BEST3-208ENST00000547208 SCAF1Q9H7N4 1312 aaKnown RBP15.87■□□□□ 0.13
BEST3-208ENST00000547208 MED1Q15648 1581 aaPredicted RBP15.87■□□□□ 0.13
BEST3-208ENST00000547208 ALKQ9UM73 1620 aa15.86■□□□□ 0.13
BEST3-208ENST00000547208 RRBP1Q9P2E9 1410 aaKnown RBP15.86■□□□□ 0.13
BEST3-208ENST00000547208 SCAF11Q99590 1463 aaKnown RBP15.85■□□□□ 0.13
BEST3-208ENST00000547208 ADGRB3O60242 1522 aa15.85■□□□□ 0.13
BEST3-208ENST00000547208 XIRP1Q702N8 1843 aaKnown RBP15.82■□□□□ 0.12
BEST3-208ENST00000547208 LTKP29376 864 aa15.82■□□□□ 0.12
BEST3-208ENST00000547208 IDI1Q13907 227 aa15.82■□□□□ 0.12
BEST3-208ENST00000547208 TMEM131LA2VDJ0 1609 aa15.82■□□□□ 0.12
BEST3-208ENST00000547208 TMEM2Q9UHN6 1383 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms