RNA–Protein interactions for RNA: ENST00000546711.5

FGD6-203, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 5 BASIC

Gene FGD6, Length 4,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-203ENST00000546711 FAM161AQ3B820 660 aa18.27■□□□□ 0.51
FGD6-203ENST00000546711 ABCC5O15440 1437 aa18.27■□□□□ 0.51
FGD6-203ENST00000546711 RPRD2Q5VT52 1461 aaKnown RBP18.26■□□□□ 0.51
FGD6-203ENST00000546711 SLKQ9H2G2 1235 aaPredicted RBP18.25■□□□□ 0.51
FGD6-203ENST00000546711 MAPK8IP3Q9UPT6 1336 aa18.25■□□□□ 0.51
FGD6-203ENST00000546711 U2SURPO15042 1029 aaKnown RBP18.25■□□□□ 0.51
FGD6-203ENST00000546711 SPRYD3Q8NCJ5 442 aa18.25■□□□□ 0.51
FGD6-203ENST00000546711 NBPF1Q3BBV0 1214 aa18.25■□□□□ 0.51
FGD6-203ENST00000546711 TROQ12816 1431 aaPredicted RBP18.24■□□□□ 0.51
FGD6-203ENST00000546711 IQGAP2Q13576 1575 aa18.22■□□□□ 0.51
FGD6-203ENST00000546711 EIF3AQ14152 1382 aaKnown RBP18.22■□□□□ 0.51
FGD6-203ENST00000546711 MYH16Q9H6N6 1097 aa18.22■□□□□ 0.51
FGD6-203ENST00000546711 ADAMTS8Q9UP79 889 aa18.22■□□□□ 0.51
FGD6-203ENST00000546711 SNAPC4Q5SXM2 1469 aa18.21■□□□□ 0.51
FGD6-203ENST00000546711 CENPJQ9HC77 1338 aaPredicted RBP18.21■□□□□ 0.51
FGD6-203ENST00000546711 UGGT2Q9NYU1 1516 aa18.21■□□□□ 0.51
FGD6-203ENST00000546711 PTPRGP23470 1445 aa18.21■□□□□ 0.51
FGD6-203ENST00000546711 APAF1O14727 1248 aa18.21■□□□□ 0.51
FGD6-203ENST00000546711 URB2Q14146 1524 aaKnown RBP18.2■□□□□ 0.5
FGD6-203ENST00000546711 GSE1Q14687 1217 aa18.2■□□□□ 0.5
FGD6-203ENST00000546711 C9orf84Q5VXU9 1444 aa18.2■□□□□ 0.5
FGD6-203ENST00000546711 BACH2Q9BYV9 841 aa18.18■□□□□ 0.5
FGD6-203ENST00000546711 CLUAP1Q96AJ1 413 aa18.18■□□□□ 0.5
FGD6-203ENST00000546711 KIF3BO15066 747 aa18.18■□□□□ 0.5
FGD6-203ENST00000546711 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.18■□□□□ 0.5
FGD6-203ENST00000546711 SPAG9O60271 1321 aaKnown RBP18.18■□□□□ 0.5
FGD6-203ENST00000546711 U2AF1L5P0DN76 240 aaPredicted RBP18.17■□□□□ 0.5
FGD6-203ENST00000546711 U2AF1Q01081 240 aaKnown RBP eCLIP18.17■□□□□ 0.5
FGD6-203ENST00000546711 RWDD1Q9H446 243 aaPredicted RBP18.17■□□□□ 0.5
FGD6-203ENST00000546711 SAFB2Q14151 953 aaKnown RBP eCLIP18.16■□□□□ 0.5
FGD6-203ENST00000546711 PMFBP1Q8TBY8 1022 aa18.16■□□□□ 0.5
FGD6-203ENST00000546711 RRP7AQ9Y3A4 280 aaKnown RBP18.16■□□□□ 0.5
FGD6-203ENST00000546711 TRIM44Q96DX7 344 aaPredicted RBP18.16■□□□□ 0.5
FGD6-203ENST00000546711 CTTNBP2Q8WZ74 1663 aa18.16■□□□□ 0.5
FGD6-203ENST00000546711 E9PSI1 815 aa18.16■□□□□ 0.5
FGD6-203ENST00000546711 THOC2Q8NI27 1593 aaKnown RBP18.15■□□□□ 0.5
FGD6-203ENST00000546711 COG6Q9Y2V7 657 aa18.14■□□□□ 0.49
FGD6-203ENST00000546711 CAMSAP2Q08AD1 1489 aa18.14■□□□□ 0.49
FGD6-203ENST00000546711 L1TD1Q5T7N2 865 aaKnown RBP18.14■□□□□ 0.49
FGD6-203ENST00000546711 HSCBQ8IWL3 235 aa18.13■□□□□ 0.49
FGD6-203ENST00000546711 LAMC3Q9Y6N6 1575 aa18.13■□□□□ 0.49
FGD6-203ENST00000546711 WASHC2CQ9Y4E1 1318 aa18.13■□□□□ 0.49
FGD6-203ENST00000546711 GLIPR1L2Q4G1C9 344 aa18.12■□□□□ 0.49
FGD6-203ENST00000546711 POGKQ9P215 609 aa18.12■□□□□ 0.49
FGD6-203ENST00000546711 KIAA0586Q9BVV6 1533 aa18.12■□□□□ 0.49
FGD6-203ENST00000546711 GOLGA6L22H0YM25 854 aa18.12■□□□□ 0.49
FGD6-203ENST00000546711 HSP90AB1P08238 724 aaKnown RBP18.11■□□□□ 0.49
FGD6-203ENST00000546711 NFKBIBQ15653 356 aa18.11■□□□□ 0.49
FGD6-203ENST00000546711 BCL2L13Q9BXK5 485 aa18.11■□□□□ 0.49
FGD6-203ENST00000546711 GGT6Q6P531 493 aa18.11■□□□□ 0.49
FGD6-203ENST00000546711 PPP2R1AP30153 589 aa18.11■□□□□ 0.49
FGD6-203ENST00000546711 SRPK2P78362 688 aaKnown RBP18.11■□□□□ 0.49
FGD6-203ENST00000546711 MRC2Q9UBG0 1479 aa18.11■□□□□ 0.49
FGD6-203ENST00000546711 CGNL1Q0VF96 1302 aa18.1■□□□□ 0.49
FGD6-203ENST00000546711 GZF1Q9H116 711 aaPredicted RBP18.1■□□□□ 0.49
FGD6-203ENST00000546711 TCOF1Q13428 1488 aaKnown RBP18.1■□□□□ 0.49
FGD6-203ENST00000546711 ITPRIPQ8IWB1 547 aa18.1■□□□□ 0.49
FGD6-203ENST00000546711 DNAJC5BQ9UF47 199 aa18.1■□□□□ 0.49
FGD6-203ENST00000546711 NAP1L5Q96NT1 182 aaPredicted RBP18.09■□□□□ 0.49
FGD6-203ENST00000546711 TRAK1Q9UPV9 953 aa18.09■□□□□ 0.49
FGD6-203ENST00000546711 MFAP1P55081 439 aaKnown RBP18.08■□□□□ 0.49
FGD6-203ENST00000546711 IFT140Q96RY7 1462 aa18.08■□□□□ 0.48
FGD6-203ENST00000546711 NCLP19338 710 aaKnown RBP18.08■□□□□ 0.48
FGD6-203ENST00000546711 ESF1Q9H501 851 aaKnown RBP18.07■□□□□ 0.48
FGD6-203ENST00000546711 SKAP1Q86WV1 359 aa18.07■□□□□ 0.48
FGD6-203ENST00000546711 SMC4Q9NTJ3 1288 aa18.07■□□□□ 0.48
FGD6-203ENST00000546711 STK26Q9P289 416 aa18.06■□□□□ 0.48
FGD6-203ENST00000546711 PLB1Q6P1J6 1458 aa18.05■□□□□ 0.48
FGD6-203ENST00000546711 ERBINQ96RT1 1412 aa18.04■□□□□ 0.48
FGD6-203ENST00000546711 IL27Q8NEV9 243 aa18.04■□□□□ 0.48
FGD6-203ENST00000546711 PNNQ9H307 717 aaKnown RBP18.04■□□□□ 0.48
FGD6-203ENST00000546711 IPO8O15397 1037 aaKnown RBP18.03■□□□□ 0.48
FGD6-203ENST00000546711 PANK1Q8TE04 598 aa18.03■□□□□ 0.48
FGD6-203ENST00000546711 CHMP4BQ9H444 224 aaKnown RBP18.03■□□□□ 0.48
FGD6-203ENST00000546711 NUTM2DQ5VT03 806 aaPredicted RBP18.02■□□□□ 0.48
FGD6-203ENST00000546711 SYNJ2O15056 1496 aa18.02■□□□□ 0.47
FGD6-203ENST00000546711 C20orf194Q5TEA3 1177 aa18.01■□□□□ 0.47
FGD6-203ENST00000546711 ARHGAP5Q13017 1502 aa18.01■□□□□ 0.47
FGD6-203ENST00000546711 ARHGEF11O15085 1522 aa18■□□□□ 0.47
FGD6-203ENST00000546711 BCAR3O75815 825 aa18■□□□□ 0.47
FGD6-203ENST00000546711 NGEFQ8N5V2 710 aa18■□□□□ 0.47
FGD6-203ENST00000546711 DHX29Q7Z478 1369 aaKnown RBP17.99■□□□□ 0.47
FGD6-203ENST00000546711 GOLGA6L3A6NEY3 463 aa17.99■□□□□ 0.47
FGD6-203ENST00000546711 CASC1Q6TDU7 716 aa17.97■□□□□ 0.47
FGD6-203ENST00000546711 GPATCH8Q9UKJ3 1502 aaKnown RBP17.97■□□□□ 0.47
FGD6-203ENST00000546711 FRAT2O75474 233 aaPredicted RBP17.96■□□□□ 0.47
FGD6-203ENST00000546711 ZKSCAN2Q63HK3 967 aa17.96■□□□□ 0.47
FGD6-203ENST00000546711 BRPF3Q9ULD4 1205 aa17.96■□□□□ 0.47
FGD6-203ENST00000546711 STAC3Q96MF2 364 aa17.96■□□□□ 0.47
FGD6-203ENST00000546711 MAGI1Q96QZ7 1491 aaPredicted RBP17.95■□□□□ 0.46
FGD6-203ENST00000546711 RUNDC1Q96C34 613 aa17.95■□□□□ 0.46
FGD6-203ENST00000546711 CFAP70Q5T0N1 1121 aa17.95■□□□□ 0.46
FGD6-203ENST00000546711 RALGAPBQ86X10 1494 aa17.94■□□□□ 0.46
FGD6-203ENST00000546711 NUP153P49790 1475 aaKnown RBP17.94■□□□□ 0.46
FGD6-203ENST00000546711 HDGFL2Q7Z4V5 671 aaPredicted RBP17.94■□□□□ 0.46
FGD6-203ENST00000546711 GRIN2AQ12879 1464 aa17.94■□□□□ 0.46
FGD6-203ENST00000546711 TEX14Q8IWB6 1497 aa17.94■□□□□ 0.46
FGD6-203ENST00000546711 AFAP1Q8N556 730 aa17.93■□□□□ 0.46
FGD6-203ENST00000546711 ZNF608Q9ULD9 1512 aaPredicted RBP17.93■□□□□ 0.46
FGD6-203ENST00000546711 GBP4Q96PP9 640 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms