RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 MLLT3P42568 568 aaPredicted RBP14.48□□□□□ -0.09
CPNE8-204ENST00000546603 EN1Q05925 392 aaPredicted RBP14.48□□□□□ -0.09
CPNE8-204ENST00000546603 RBM33Q96EV2 1170 aaKnown RBP14.48□□□□□ -0.09
CPNE8-204ENST00000546603 OSBPP22059 807 aa14.47□□□□□ -0.09
CPNE8-204ENST00000546603 ANKRD13DQ6ZTN6 518 aa14.47□□□□□ -0.09
CPNE8-204ENST00000546603 MAP3K7O43318 606 aa14.46□□□□□ -0.09
CPNE8-204ENST00000546603 C6orf132Q5T0Z8 1188 aa14.46□□□□□ -0.09
CPNE8-204ENST00000546603 DMRTA1Q5VZB9 504 aa14.44□□□□□ -0.1
CPNE8-204ENST00000546603 TESPA1A2RU30 521 aaPredicted RBP14.43□□□□□ -0.1
CPNE8-204ENST00000546603 SMYD5Q6GMV2 418 aa14.43□□□□□ -0.1
CPNE8-204ENST00000546603 PPP1R3GB7ZBB8 358 aa14.42□□□□□ -0.1
CPNE8-204ENST00000546603 TK2O00142 265 aa14.42□□□□□ -0.1
CPNE8-204ENST00000546603 PRIM1P49642 420 aaKnown RBP14.4□□□□□ -0.1
CPNE8-204ENST00000546603 SLC4A5Q9BY07 1137 aa14.4□□□□□ -0.1
CPNE8-204ENST00000546603 ADGRD1Q6QNK2 874 aa14.39□□□□□ -0.11
CPNE8-204ENST00000546603 TSR1Q2NL82 804 aaKnown RBP14.38□□□□□ -0.11
CPNE8-204ENST00000546603 SPNS2Q8IVW8 549 aa14.38□□□□□ -0.11
CPNE8-204ENST00000546603 COL9A1P20849 921 aa14.37□□□□□ -0.11
CPNE8-204ENST00000546603 ZBED2Q9BTP6 218 aa14.37□□□□□ -0.11
CPNE8-204ENST00000546603 CERKQ8TCT0 537 aa14.36□□□□□ -0.11
CPNE8-204ENST00000546603 VPS9D1Q9Y2B5 631 aa14.35□□□□□ -0.11
CPNE8-204ENST00000546603 TULP1O00294 542 aaPredicted RBP14.32□□□□□ -0.12
CPNE8-204ENST00000546603 HRO43593 1189 aa14.29□□□□□ -0.12
CPNE8-204ENST00000546603 ONECUT3O60422 494 aaPredicted RBP14.29□□□□□ -0.12
CPNE8-204ENST00000546603 STAC3Q96MF2 364 aa14.29□□□□□ -0.12
CPNE8-204ENST00000546603 CDHR5Q9HBB8 845 aa14.29□□□□□ -0.12
CPNE8-204ENST00000546603 NUTM2FA1L443 756 aa14.28□□□□□ -0.12
CPNE8-204ENST00000546603 PROX2Q3B8N5 592 aa14.27□□□□□ -0.13
CPNE8-204ENST00000546603 RBM26Q5T8P6 1007 aaKnown RBP14.26□□□□□ -0.13
CPNE8-204ENST00000546603 RABGEF1Q9UJ41 708 aa14.26□□□□□ -0.13
CPNE8-204ENST00000546603 TRIM6-TRIM34B2RNG4 842 aa14.25□□□□□ -0.13
CPNE8-204ENST00000546603 PRSS12P56730 875 aa14.25□□□□□ -0.13
CPNE8-204ENST00000546603 NPDC1Q9NQX5 325 aaPredicted RBP14.25□□□□□ -0.13
CPNE8-204ENST00000546603 MYT1LQ9UL68 1186 aa14.25□□□□□ -0.13
CPNE8-204ENST00000546603 MMRN1Q13201 1228 aa14.24□□□□□ -0.13
CPNE8-204ENST00000546603 CDCA7LQ96GN5 454 aa14.24□□□□□ -0.13
CPNE8-204ENST00000546603 BHMG1C9JSJ3 638 aaPredicted RBP14.23□□□□□ -0.13
CPNE8-204ENST00000546603 NBPF3Q9H094 633 aa14.23□□□□□ -0.13
CPNE8-204ENST00000546603 RBM27Q9P2N5 1060 aaKnown RBP14.23□□□□□ -0.13
CPNE8-204ENST00000546603 PTGDRQ13258 359 aa14.22□□□□□ -0.13
CPNE8-204ENST00000546603 PACS2Q86VP3 889 aa14.22□□□□□ -0.13
CPNE8-204ENST00000546603 KIAA1468Q9P260 1216 aa14.22□□□□□ -0.13
CPNE8-204ENST00000546603 FCHSD2O94868 740 aa14.2□□□□□ -0.14
CPNE8-204ENST00000546603 MRPL50Q8N5N7 158 aaKnown RBP14.19□□□□□ -0.14
CPNE8-204ENST00000546603 TSKSQ9UJT2 592 aa14.19□□□□□ -0.14
CPNE8-204ENST00000546603 RNF166Q96A37 237 aaPredicted RBP14.16□□□□□ -0.14
CPNE8-204ENST00000546603 LAPTM4BQ86VI4 370 aa14.15□□□□□ -0.14
CPNE8-204ENST00000546603 GOLGA8CPA6NN73 597 aa14.14□□□□□ -0.15
CPNE8-204ENST00000546603 PADI6Q6TGC4 694 aa14.14□□□□□ -0.15
CPNE8-204ENST00000546603 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.14□□□□□ -0.15
CPNE8-204ENST00000546603 GPIHBP1Q8IV16 184 aa14.14□□□□□ -0.15
CPNE8-204ENST00000546603 TTC13Q8NBP0 860 aa14.14□□□□□ -0.15
CPNE8-204ENST00000546603 FAM198AQ9UFP1 575 aa14.14□□□□□ -0.15
CPNE8-204ENST00000546603 HIC1Q14526 733 aa14.13□□□□□ -0.15
CPNE8-204ENST00000546603 NBPF26B4DH59 902 aa14.12□□□□□ -0.15
CPNE8-204ENST00000546603 TATDN2Q93075 761 aa14.1□□□□□ -0.15
CPNE8-204ENST00000546603 BCANQ96GW7 911 aa14.1□□□□□ -0.15
CPNE8-204ENST00000546603 SEPT9Q9UHD8 586 aaPredicted RBP14.1□□□□□ -0.15
CPNE8-204ENST00000546603 FAM98CQ17RN3 349 aaKnown RBP14.09□□□□□ -0.15
CPNE8-204ENST00000546603 PNMA3Q9UL41 463 aa14.09□□□□□ -0.15
CPNE8-204ENST00000546603 GNPATO15228 680 aa14.08□□□□□ -0.16
CPNE8-204ENST00000546603 LMOD2Q6P5Q4 547 aa14.08□□□□□ -0.16
CPNE8-204ENST00000546603 GPR37O15354 613 aa14.07□□□□□ -0.16
CPNE8-204ENST00000546603 NUDT18Q6ZVK8 323 aa14.06□□□□□ -0.16
CPNE8-204ENST00000546603 KCTD12Q96CX2 325 aaKnown RBP14.06□□□□□ -0.16
CPNE8-204ENST00000546603 WNT2BQ93097 391 aa14.05□□□□□ -0.16
CPNE8-204ENST00000546603 ZFRQ96KR1 1074 aaKnown RBP14.05□□□□□ -0.16
CPNE8-204ENST00000546603 SMAPO00193 183 aa14.04□□□□□ -0.16
CPNE8-204ENST00000546603 C3orf80F5H4A9 247 aa14.03□□□□□ -0.16
CPNE8-204ENST00000546603 ANKK1Q8NFD2 765 aa14.03□□□□□ -0.16
CPNE8-204ENST00000546603 ADGRG1Q9Y653 693 aa14.01□□□□□ -0.17
CPNE8-204ENST00000546603 RBM46Q8TBY0 533 aaKnown RBP14□□□□□ -0.17
CPNE8-204ENST00000546603 EYA1Q99502 592 aa14□□□□□ -0.17
CPNE8-204ENST00000546603 FECHP22830 423 aa13.99□□□□□ -0.17
CPNE8-204ENST00000546603 HDGFP51858 240 aaKnown RBP13.99□□□□□ -0.17
CPNE8-204ENST00000546603 OATP04181 439 aa13.98□□□□□ -0.17
CPNE8-204ENST00000546603 THSD4Q6ZMP0 1018 aa13.98□□□□□ -0.17
CPNE8-204ENST00000546603 HCSTQ9UBK5 93 aa13.98□□□□□ -0.17
CPNE8-204ENST00000546603 SOWAHBA6NEL2 793 aa13.96□□□□□ -0.17
CPNE8-204ENST00000546603 FAM161AQ3B820 660 aa13.95□□□□□ -0.18
CPNE8-204ENST00000546603 LRCH3Q96II8 777 aa13.95□□□□□ -0.18
CPNE8-204ENST00000546603 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.95□□□□□ -0.18
CPNE8-204ENST00000546603 DNAJB2P25686 324 aa13.92□□□□□ -0.18
CPNE8-204ENST00000546603 PTPN5P54829 565 aa13.92□□□□□ -0.18
CPNE8-204ENST00000546603 SAMD7Q7Z3H4 446 aa13.92□□□□□ -0.18
CPNE8-204ENST00000546603 BCAMP50895 628 aa13.91□□□□□ -0.18
CPNE8-204ENST00000546603 MAP2K5Q13163 448 aa13.91□□□□□ -0.18
CPNE8-204ENST00000546603 PXYLP1Q8TE99 480 aa13.91□□□□□ -0.18
CPNE8-204ENST00000546603 ZC3H15Q8WU90 426 aaKnown RBP13.91□□□□□ -0.18
CPNE8-204ENST00000546603 METTL3Q86U44 580 aaKnown RBP13.9□□□□□ -0.18
CPNE8-204ENST00000546603 MINK1Q8N4C8 1332 aaPredicted RBP13.9□□□□□ -0.19
CPNE8-204ENST00000546603 RCCD1A6NED2 376 aa13.89□□□□□ -0.19
CPNE8-204ENST00000546603 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.88□□□□□ -0.19
CPNE8-204ENST00000546603 SLC4A3P48751 1232 aa13.88□□□□□ -0.19
CPNE8-204ENST00000546603 IRF6O14896 467 aa13.87□□□□□ -0.19
CPNE8-204ENST00000546603 ZMYND10O75800 440 aa13.87□□□□□ -0.19
CPNE8-204ENST00000546603 SWT1Q5T5J6 900 aaKnown RBP13.87□□□□□ -0.19
CPNE8-204ENST00000546603 TSR3Q9UJK0 312 aaKnown RBP13.87□□□□□ -0.19
CPNE8-204ENST00000546603 BARGINQ6ZT62 677 aa13.86□□□□□ -0.19
CPNE8-204ENST00000546603 TMEM134Q9H6X4 195 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms