RNA–Protein interactions for RNA: ENST00000546491.1

APAF1-204, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 3

Gene APAF1, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-204ENST00000546491 CDHR5Q9HBB8 845 aa13.17□□□□□ -0.3
APAF1-204ENST00000546491 PPP4R3BQ5MIZ7 849 aa13.16□□□□□ -0.3
APAF1-204ENST00000546491 C6orf132Q5T0Z8 1188 aa13.15□□□□□ -0.3
APAF1-204ENST00000546491 CERKQ8TCT0 537 aa13.15□□□□□ -0.3
APAF1-204ENST00000546491 NPDC1Q9NQX5 325 aaPredicted RBP13.15□□□□□ -0.3
APAF1-204ENST00000546491 IRF6O14896 467 aa13.14□□□□□ -0.31
APAF1-204ENST00000546491 ADAM33Q9BZ11 813 aa13.14□□□□□ -0.31
APAF1-204ENST00000546491 BRPF1P55201 1214 aaPredicted RBP13.13□□□□□ -0.31
APAF1-204ENST00000546491 FECHP22830 423 aa13.12□□□□□ -0.31
APAF1-204ENST00000546491 NEUROD2Q15784 382 aa13.11□□□□□ -0.31
APAF1-204ENST00000546491 TRIM66O15016 1216 aa13.1□□□□□ -0.31
APAF1-204ENST00000546491 CCDC102AQ96A19 550 aa13.1□□□□□ -0.31
APAF1-204ENST00000546491 BCL2L12Q9HB09 334 aa13.08□□□□□ -0.32
APAF1-204ENST00000546491 PTPREP23469 700 aa13.05□□□□□ -0.32
APAF1-204ENST00000546491 PDE4DQ08499 809 aa13.04□□□□□ -0.32
APAF1-204ENST00000546491 RBM27Q9P2N5 1060 aaKnown RBP13.04□□□□□ -0.32
APAF1-204ENST00000546491 ST18O60284 1047 aa13.03□□□□□ -0.32
APAF1-204ENST00000546491 PRSS12P56730 875 aa13.01□□□□□ -0.33
APAF1-204ENST00000546491 AMHR2Q16671 573 aa13.01□□□□□ -0.33
APAF1-204ENST00000546491 PADI6Q6TGC4 694 aa13.01□□□□□ -0.33
APAF1-204ENST00000546491 ERBB3P21860 1342 aa13.01□□□□□ -0.33
APAF1-204ENST00000546491 PPP1R3GB7ZBB8 358 aa13□□□□□ -0.33
APAF1-204ENST00000546491 TMEM132AQ24JP5 1023 aa13□□□□□ -0.33
APAF1-204ENST00000546491 KCNH8Q96L42 1107 aa13□□□□□ -0.33
APAF1-204ENST00000546491 CDCA7LQ96GN5 454 aa12.99□□□□□ -0.33
APAF1-204ENST00000546491 OATP04181 439 aa12.98□□□□□ -0.33
APAF1-204ENST00000546491 COL9A1P20849 921 aa12.98□□□□□ -0.33
APAF1-204ENST00000546491 TTC13Q8NBP0 860 aa12.98□□□□□ -0.33
APAF1-204ENST00000546491 EMP3P54852 163 aa12.97□□□□□ -0.33
APAF1-204ENST00000546491 GPBP1L1Q9HC44 474 aaPredicted RBP12.97□□□□□ -0.33
APAF1-204ENST00000546491 VARS2Q5ST30 1063 aaKnown RBP12.96□□□□□ -0.33
APAF1-204ENST00000546491 KDM4CQ9H3R0 1056 aa12.96□□□□□ -0.33
APAF1-204ENST00000546491 FAM163AQ96GL9 167 aaPredicted RBP12.95□□□□□ -0.34
APAF1-204ENST00000546491 KCNK17Q96T54 332 aa12.95□□□□□ -0.34
APAF1-204ENST00000546491 DAXXQ9UER7 740 aaPredicted RBP12.95□□□□□ -0.34
APAF1-204ENST00000546491 ADGRG1Q9Y653 693 aa12.95□□□□□ -0.34
APAF1-204ENST00000546491 TTLL12Q14166 644 aaPredicted RBP12.93□□□□□ -0.34
APAF1-204ENST00000546491 MARVELD3Q96A59 401 aa12.93□□□□□ -0.34
APAF1-204ENST00000546491 FAM161AQ3B820 660 aa12.92□□□□□ -0.34
APAF1-204ENST00000546491 METTL3Q86U44 580 aaKnown RBP12.92□□□□□ -0.34
APAF1-204ENST00000546491 PARP9Q8IXQ6 854 aa12.92□□□□□ -0.34
APAF1-204ENST00000546491 RBM46Q8TBY0 533 aaKnown RBP12.91□□□□□ -0.34
APAF1-204ENST00000546491 TRIM6-TRIM34B2RNG4 842 aa12.9□□□□□ -0.34
APAF1-204ENST00000546491 ARHGAP33O14559 1287 aa12.9□□□□□ -0.34
APAF1-204ENST00000546491 PXYLP1Q8TE99 480 aa12.9□□□□□ -0.34
APAF1-204ENST00000546491 ONECUT3O60422 494 aaPredicted RBP12.89□□□□□ -0.35
APAF1-204ENST00000546491 CLCN1P35523 988 aa12.89□□□□□ -0.35
APAF1-204ENST00000546491 PBX2P40425 430 aa12.89□□□□□ -0.35
APAF1-204ENST00000546491 PACS2Q86VP3 889 aa12.89□□□□□ -0.35
APAF1-204ENST00000546491 TSKSQ9UJT2 592 aa12.89□□□□□ -0.35
APAF1-204ENST00000546491 FAM205CA6NFA0 338 aa12.88□□□□□ -0.35
APAF1-204ENST00000546491 PHOX2BQ99453 314 aa12.88□□□□□ -0.35
APAF1-204ENST00000546491 FAM198AQ9UFP1 575 aa12.88□□□□□ -0.35
APAF1-204ENST00000546491 ZNF687Q8N1G0 1237 aa12.87□□□□□ -0.35
APAF1-204ENST00000546491 NBPF26B4DH59 902 aa12.86□□□□□ -0.35
APAF1-204ENST00000546491 PSEN2P49810 448 aa12.86□□□□□ -0.35
APAF1-204ENST00000546491 GPCPD1Q9NPB8 672 aa12.86□□□□□ -0.35
APAF1-204ENST00000546491 MDM2Q00987 491 aaPredicted RBP12.85□□□□□ -0.35
APAF1-204ENST00000546491 ZBED2Q9BTP6 218 aa12.85□□□□□ -0.35
APAF1-204ENST00000546491 PROX2Q3B8N5 592 aa12.84□□□□□ -0.35
APAF1-204ENST00000546491 GIGYF2Q6Y7W6 1299 aaKnown RBP12.84□□□□□ -0.35
APAF1-204ENST00000546491 TMUB1Q9BVT8 246 aa12.84□□□□□ -0.35
APAF1-204ENST00000546491 NUDT18Q6ZVK8 323 aa12.83□□□□□ -0.36
APAF1-204ENST00000546491 IL27Q8NEV9 243 aa12.83□□□□□ -0.36
APAF1-204ENST00000546491 TATDN2Q93075 761 aa12.83□□□□□ -0.36
APAF1-204ENST00000546491 DDRGK1Q96HY6 314 aa12.83□□□□□ -0.36
APAF1-204ENST00000546491 EYA1Q99502 592 aa12.83□□□□□ -0.36
APAF1-204ENST00000546491 SLC4A5Q9BY07 1137 aa12.83□□□□□ -0.36
APAF1-204ENST00000546491 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.82□□□□□ -0.36
APAF1-204ENST00000546491 POTEEQ6S8J3 1075 aa12.82□□□□□ -0.36
APAF1-204ENST00000546491 HS3ST6Q96QI5 342 aa12.82□□□□□ -0.36
APAF1-204ENST00000546491 PNMA3Q9UL41 463 aa12.82□□□□□ -0.36
APAF1-204ENST00000546491 REPIN1Q9BWE0 567 aaKnown RBP12.81□□□□□ -0.36
APAF1-204ENST00000546491 FAM117AQ9C073 453 aa12.81□□□□□ -0.36
APAF1-204ENST00000546491 AXIN2Q9Y2T1 843 aa12.81□□□□□ -0.36
APAF1-204ENST00000546491 RCCD1A6NED2 376 aa12.8□□□□□ -0.36
APAF1-204ENST00000546491 KIAA1468Q9P260 1216 aa12.8□□□□□ -0.36
APAF1-204ENST00000546491 DMRTA1Q5VZB9 504 aa12.79□□□□□ -0.36
APAF1-204ENST00000546491 LCE2DQ5TA82 110 aaPredicted RBP12.78□□□□□ -0.36
APAF1-204ENST00000546491 NLRP7Q8WX94 980 aa12.78□□□□□ -0.36
APAF1-204ENST00000546491 RABGEF1Q9UJ41 708 aa12.78□□□□□ -0.36
APAF1-204ENST00000546491 DNAJB2P25686 324 aa12.77□□□□□ -0.37
APAF1-204ENST00000546491 SSTR3P32745 418 aaPredicted RBP12.77□□□□□ -0.37
APAF1-204ENST00000546491 POTEB3A0JP26 581 aa12.76□□□□□ -0.37
APAF1-204ENST00000546491 C3orf80F5H4A9 247 aa12.76□□□□□ -0.37
APAF1-204ENST00000546491 MS4A1P11836 297 aa12.76□□□□□ -0.37
APAF1-204ENST00000546491 POTEBQ6S5H4 581 aa12.76□□□□□ -0.37
APAF1-204ENST00000546491 FAM217BQ9NTX9 383 aaPredicted RBP12.76□□□□□ -0.37
APAF1-204ENST00000546491 VPS9D1Q9Y2B5 631 aa12.74□□□□□ -0.37
APAF1-204ENST00000546491 GTF3C3Q9Y5Q9 886 aa12.74□□□□□ -0.37
APAF1-204ENST00000546491 PLEKHG3A1L390 1219 aa12.73□□□□□ -0.37
APAF1-204ENST00000546491 SMAPO00193 183 aa12.73□□□□□ -0.37
APAF1-204ENST00000546491 TMEM134Q9H6X4 195 aa12.72□□□□□ -0.37
APAF1-204ENST00000546491 TK2O00142 265 aa12.71□□□□□ -0.37
APAF1-204ENST00000546491 SULF1Q8IWU6 871 aa12.7□□□□□ -0.38
APAF1-204ENST00000546491 NBPF3Q9H094 633 aa12.7□□□□□ -0.38
APAF1-204ENST00000546491 LSM11P83369 360 aaKnown RBP eCLIP12.68□□□□□ -0.38
APAF1-204ENST00000546491 FAM98CQ17RN3 349 aaKnown RBP12.68□□□□□ -0.38
APAF1-204ENST00000546491 BEGAINQ9BUH8 593 aa12.68□□□□□ -0.38
APAF1-204ENST00000546491 SEPT9Q9UHD8 586 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms