RNA–Protein interactions for RNA: ENST00000546483.1

ATXN2-216, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,098 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-216ENST00000546483 IL27Q8NEV9 243 aa16.27■□□□□ 0.2
ATXN2-216ENST00000546483 WDR7Q9Y4E6 1490 aa16.27■□□□□ 0.19
ATXN2-216ENST00000546483 ASXL2Q76L83 1435 aa16.27■□□□□ 0.19
ATXN2-216ENST00000546483 PDE4AP27815 886 aa16.26■□□□□ 0.19
ATXN2-216ENST00000546483 UHRF1BP1Q6BDS2 1440 aa16.26■□□□□ 0.19
ATXN2-216ENST00000546483 USP47Q96K76 1375 aa16.26■□□□□ 0.19
ATXN2-216ENST00000546483 SENP3Q9H4L4 574 aaPredicted RBP16.25■□□□□ 0.19
ATXN2-216ENST00000546483 PZPP20742 1482 aa16.25■□□□□ 0.19
ATXN2-216ENST00000546483 ABCC5O15440 1437 aa16.25■□□□□ 0.19
ATXN2-216ENST00000546483 INSRP06213 1382 aa16.24■□□□□ 0.19
ATXN2-216ENST00000546483 ZMYM4Q5VZL5 1548 aa16.24■□□□□ 0.19
ATXN2-216ENST00000546483 KIF15Q9NS87 1388 aa16.24■□□□□ 0.19
ATXN2-216ENST00000546483 NEFMP07197 916 aa16.23■□□□□ 0.19
ATXN2-216ENST00000546483 PDE3BQ13370 1112 aa16.23■□□□□ 0.19
ATXN2-216ENST00000546483 FOXD1Q16676 465 aa16.23■□□□□ 0.19
ATXN2-216ENST00000546483 RALGAPBQ86X10 1494 aa16.22■□□□□ 0.19
ATXN2-216ENST00000546483 E9PCH4 1651 aa16.22■□□□□ 0.19
ATXN2-216ENST00000546483 DDRGK1Q96HY6 314 aa16.2■□□□□ 0.18
ATXN2-216ENST00000546483 ABCC10Q5T3U5 1492 aa16.2■□□□□ 0.18
ATXN2-216ENST00000546483 RALBP1Q15311 655 aa16.2■□□□□ 0.18
ATXN2-216ENST00000546483 TMC1Q8TDI8 760 aa16.2■□□□□ 0.18
ATXN2-216ENST00000546483 KIAA1107Q9UPP5 1409 aa16.2■□□□□ 0.18
ATXN2-216ENST00000546483 ARHGEF12Q9NZN5 1544 aa16.19■□□□□ 0.18
ATXN2-216ENST00000546483 MYBBP1AQ9BQG0 1328 aaKnown RBP16.19■□□□□ 0.18
ATXN2-216ENST00000546483 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.19■□□□□ 0.18
ATXN2-216ENST00000546483 SLC4A1APQ9BWU0 796 aaKnown RBP16.18■□□□□ 0.18
ATXN2-216ENST00000546483 ITSN2Q9NZM3 1697 aa16.18■□□□□ 0.18
ATXN2-216ENST00000546483 EXOC6Q8TAG9 804 aa16.18■□□□□ 0.18
ATXN2-216ENST00000546483 RCAN3Q9UKA8 241 aa16.18■□□□□ 0.18
ATXN2-216ENST00000546483 TTC37Q6PGP7 1564 aa16.18■□□□□ 0.18
ATXN2-216ENST00000546483 CDC42BPAQ5VT25 1732 aa16.17■□□□□ 0.18
ATXN2-216ENST00000546483 GPATCH8Q9UKJ3 1502 aaKnown RBP16.17■□□□□ 0.18
ATXN2-216ENST00000546483 ADGRL2O95490 1459 aa16.16■□□□□ 0.18
ATXN2-216ENST00000546483 ADGBQ8N7X0 1667 aa16.16■□□□□ 0.18
ATXN2-216ENST00000546483 ABCA9Q8IUA7 1624 aa16.15■□□□□ 0.18
ATXN2-216ENST00000546483 MYO5CQ9NQX4 1742 aa16.15■□□□□ 0.18
ATXN2-216ENST00000546483 GSE1Q14687 1217 aa16.14■□□□□ 0.17
ATXN2-216ENST00000546483 PREX2Q70Z35 1606 aa16.13■□□□□ 0.17
ATXN2-216ENST00000546483 CFDP1Q9UEE9 299 aaPredicted RBP16.13■□□□□ 0.17
ATXN2-216ENST00000546483 LAS1LQ9Y4W2 734 aaKnown RBP16.13■□□□□ 0.17
ATXN2-216ENST00000546483 NPM2Q86SE8 214 aaKnown RBP16.12■□□□□ 0.17
ATXN2-216ENST00000546483 UBE2Q2Q8WVN8 375 aa16.12■□□□□ 0.17
ATXN2-216ENST00000546483 PARD3Q8TEW0 1356 aa16.11■□□□□ 0.17
ATXN2-216ENST00000546483 CDC42BPBQ9Y5S2 1711 aa16.11■□□□□ 0.17
ATXN2-216ENST00000546483 PLEKHH2Q8IVE3 1493 aa16.1■□□□□ 0.17
ATXN2-216ENST00000546483 PLCH2O75038 1416 aa16.1■□□□□ 0.17
ATXN2-216ENST00000546483 DIP2BQ9P265 1576 aa16.1■□□□□ 0.17
ATXN2-216ENST00000546483 ARHGAP5Q13017 1502 aa16.1■□□□□ 0.17
ATXN2-216ENST00000546483 GLI2P10070 1586 aa16.09■□□□□ 0.17
ATXN2-216ENST00000546483 CROCC2H7BZ55 1655 aa16.09■□□□□ 0.17
ATXN2-216ENST00000546483 BLMP54132 1417 aaPredicted RBP16.09■□□□□ 0.17
ATXN2-216ENST00000546483 NLRP13Q86W25 1043 aa16.09■□□□□ 0.17
ATXN2-216ENST00000546483 ARAP3Q8WWN8 1544 aa16.08■□□□□ 0.16
ATXN2-216ENST00000546483 ZNF777Q9ULD5 760 aaPredicted RBP16.07■□□□□ 0.16
ATXN2-216ENST00000546483 CD109Q6YHK3 1445 aa16.07■□□□□ 0.16
ATXN2-216ENST00000546483 KDM5DQ9BY66 1539 aa16.07■□□□□ 0.16
ATXN2-216ENST00000546483 FAM69CQ0P6D2 419 aa16.07■□□□□ 0.16
ATXN2-216ENST00000546483 NFKBIBQ15653 356 aa16.07■□□□□ 0.16
ATXN2-216ENST00000546483 RTN4Q9NQC3 1192 aaKnown RBP16.07■□□□□ 0.16
ATXN2-216ENST00000546483 CAMSAP2Q08AD1 1489 aa16.06■□□□□ 0.16
ATXN2-216ENST00000546483 EFCAB2Q5VUJ9 269 aa16.05■□□□□ 0.16
ATXN2-216ENST00000546483 MAP3K4Q9Y6R4 1608 aa16.05■□□□□ 0.16
ATXN2-216ENST00000546483 KDM2BQ8NHM5 1336 aa16.05■□□□□ 0.16
ATXN2-216ENST00000546483 ZNF644Q9H582 1327 aaPredicted RBP16.05■□□□□ 0.16
ATXN2-216ENST00000546483 KIF13AQ9H1H9 1805 aa16.03■□□□□ 0.16
ATXN2-216ENST00000546483 SAMD9LQ8IVG5 1584 aa16.03■□□□□ 0.16
ATXN2-216ENST00000546483 FANCAO15360 1455 aa16.02■□□□□ 0.15
ATXN2-216ENST00000546483 BRPF3Q9ULD4 1205 aa16.02■□□□□ 0.15
ATXN2-216ENST00000546483 CARD11Q9BXL7 1154 aa16.01■□□□□ 0.15
ATXN2-216ENST00000546483 CFAP74Q9C0B2 1584 aa16.01■□□□□ 0.15
ATXN2-216ENST00000546483 PKD2Q13563 968 aa15.99■□□□□ 0.15
ATXN2-216ENST00000546483 FRAT1Q92837 279 aaPredicted RBP15.99■□□□□ 0.15
ATXN2-216ENST00000546483 SHANK2Q9UPX8 1470 aa15.99■□□□□ 0.15
ATXN2-216ENST00000546483 LAMC1P11047 1609 aa15.99■□□□□ 0.15
ATXN2-216ENST00000546483 PER1O15534 1290 aaPredicted RBP15.98■□□□□ 0.15
ATXN2-216ENST00000546483 TSPOAP1O95153 1857 aa15.98■□□□□ 0.15
ATXN2-216ENST00000546483 CENPQQ7L2Z9 268 aaPredicted RBP15.98■□□□□ 0.15
ATXN2-216ENST00000546483 FAM43AQ8N2R8 423 aa15.98■□□□□ 0.15
ATXN2-216ENST00000546483 POLR3GLQ9BT43 218 aa15.98■□□□□ 0.15
ATXN2-216ENST00000546483 ANKRD30AQ9BXX3 1397 aa15.98■□□□□ 0.15
ATXN2-216ENST00000546483 ST20-MTHFSA0A0A6YYL1 179 aa15.98■□□□□ 0.15
ATXN2-216ENST00000546483 ABCC1P33527 1531 aa15.97■□□□□ 0.15
ATXN2-216ENST00000546483 SYCP2Q9BX26 1530 aa15.97■□□□□ 0.15
ATXN2-216ENST00000546483 CRBNQ96SW2 442 aa15.97■□□□□ 0.15
ATXN2-216ENST00000546483 ANKRD50Q9ULJ7 1429 aa15.97■□□□□ 0.15
ATXN2-216ENST00000546483 FAM161AQ3B820 660 aa15.96■□□□□ 0.15
ATXN2-216ENST00000546483 RSPH6AQ9H0K4 717 aa15.96■□□□□ 0.15
ATXN2-216ENST00000546483 ARHGEF5Q12774 1597 aa15.96■□□□□ 0.15
ATXN2-216ENST00000546483 NEO1Q92859 1461 aa15.96■□□□□ 0.15
ATXN2-216ENST00000546483 HNRNPMP52272 730 aaKnown RBP eCLIP15.96■□□□□ 0.153e-8■■■■■ 32
ATXN2-216ENST00000546483 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.96■□□□□ 0.15
ATXN2-216ENST00000546483 TRPM1Q7Z4N2 1603 aa15.95■□□□□ 0.14
ATXN2-216ENST00000546483 RSPH4AQ5TD94 716 aa15.95■□□□□ 0.14
ATXN2-216ENST00000546483 CDCA7LQ96GN5 454 aa15.95■□□□□ 0.14
ATXN2-216ENST00000546483 ADGRL1O94910 1474 aa15.95■□□□□ 0.14
ATXN2-216ENST00000546483 GPRASP1Q5JY77 1395 aa15.95■□□□□ 0.14
ATXN2-216ENST00000546483 C8orf34Q49A92 452 aa15.95■□□□□ 0.14
ATXN2-216ENST00000546483 PPRC1Q5VV67 1664 aaKnown RBP15.94■□□□□ 0.14
ATXN2-216ENST00000546483 CCDC141Q6ZP82 1450 aa15.94■□□□□ 0.14
ATXN2-216ENST00000546483 COL17A1Q9UMD9 1497 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms