RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 CTTNBP2Q8WZ74 1663 aa11.97□□□□□ -0.49
CCDC60-205ENST00000546345 ARAP3Q8WWN8 1544 aa11.97□□□□□ -0.49
CCDC60-205ENST00000546345 PELP1Q8IZL8 1130 aaKnown RBP11.97□□□□□ -0.49
CCDC60-205ENST00000546345 SOCS7O14512 581 aa11.96□□□□□ -0.49
CCDC60-205ENST00000546345 ABCA8O94911 1581 aa11.96□□□□□ -0.5
CCDC60-205ENST00000546345 IER5LQ5T953 404 aa11.95□□□□□ -0.5
CCDC60-205ENST00000546345 SPRYD3Q8NCJ5 442 aa11.95□□□□□ -0.5
CCDC60-205ENST00000546345 RYDENQ9NUL5 291 aaKnown RBP11.95□□□□□ -0.5
CCDC60-205ENST00000546345 CD109Q6YHK3 1445 aa11.94□□□□□ -0.5
CCDC60-205ENST00000546345 KIF27Q86VH2 1401 aa11.94□□□□□ -0.5
CCDC60-205ENST00000546345 ABCA9Q8IUA7 1624 aa11.94□□□□□ -0.5
CCDC60-205ENST00000546345 NLRP6P59044 892 aa11.94□□□□□ -0.5
CCDC60-205ENST00000546345 PAXIP1Q6ZW49 1069 aaPredicted RBP11.94□□□□□ -0.5
CCDC60-205ENST00000546345 SLC39A7Q92504 469 aa11.94□□□□□ -0.5
CCDC60-205ENST00000546345 ARHGEF40Q8TER5 1519 aa11.94□□□□□ -0.5
CCDC60-205ENST00000546345 MFRPQ9BY79 579 aa11.93□□□□□ -0.5
CCDC60-205ENST00000546345 PHF8Q9UPP1 1060 aa11.93□□□□□ -0.5
CCDC60-205ENST00000546345 RICTORQ6R327 1708 aa11.92□□□□□ -0.5
CCDC60-205ENST00000546345 C7P10643 843 aa11.92□□□□□ -0.5
CCDC60-205ENST00000546345 CFAP44Q96MT7 982 aa11.92□□□□□ -0.5
CCDC60-205ENST00000546345 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.92□□□□□ -0.5
CCDC60-205ENST00000546345 GTPBP6O43824 516 aaPredicted RBP11.91□□□□□ -0.5
CCDC60-205ENST00000546345 DISP3Q9P2K9 1392 aa11.91□□□□□ -0.5
CCDC60-205ENST00000546345 FER1L4A9Z1Z3 1794 aa11.9□□□□□ -0.5
CCDC60-205ENST00000546345 STRCQ7RTU9 1775 aa11.9□□□□□ -0.5
CCDC60-205ENST00000546345 CARMIL1Q5VZK9 1371 aa11.9□□□□□ -0.5
CCDC60-205ENST00000546345 SEC24BO95487 1268 aa11.89□□□□□ -0.51
CCDC60-205ENST00000546345 IRX5P78411 483 aaPredicted RBP11.88□□□□□ -0.51
CCDC60-205ENST00000546345 PLCB2Q00722 1185 aa11.88□□□□□ -0.51
CCDC60-205ENST00000546345 FBXO22Q8NEZ5 403 aa11.88□□□□□ -0.51
CCDC60-205ENST00000546345 OCEL1Q9H607 264 aa11.88□□□□□ -0.51
CCDC60-205ENST00000546345 PREX1Q8TCU6 1659 aa11.87□□□□□ -0.51
CCDC60-205ENST00000546345 METRNQ9UJH8 293 aa11.87□□□□□ -0.51
CCDC60-205ENST00000546345 TTC37Q6PGP7 1564 aa11.87□□□□□ -0.51
CCDC60-205ENST00000546345 PLCG2P16885 1265 aa11.86□□□□□ -0.51
CCDC60-205ENST00000546345 CERKQ8TCT0 537 aa11.84□□□□□ -0.51
CCDC60-205ENST00000546345 HSPA2P54652 639 aa11.83□□□□□ -0.52
CCDC60-205ENST00000546345 MS4A4AQ96JQ5 239 aa11.83□□□□□ -0.52
CCDC60-205ENST00000546345 COLQQ9Y215 455 aaPredicted RBP11.82□□□□□ -0.52
CCDC60-205ENST00000546345 PDCD7Q8N8D1 485 aaKnown RBP11.81□□□□□ -0.52
CCDC60-205ENST00000546345 NEO1Q92859 1461 aa11.8□□□□□ -0.52
CCDC60-205ENST00000546345 ZMYM4Q5VZL5 1548 aa11.8□□□□□ -0.52
CCDC60-205ENST00000546345 RAPGEF2Q9Y4G8 1499 aa11.79□□□□□ -0.52
CCDC60-205ENST00000546345 POTEFA5A3E0 1075 aa11.79□□□□□ -0.52
CCDC60-205ENST00000546345 DPY19L2Q6NUT2 758 aa11.79□□□□□ -0.52
CCDC60-205ENST00000546345 PPP1R37O75864 691 aa11.78□□□□□ -0.52
CCDC60-205ENST00000546345 KCNH8Q96L42 1107 aa11.76□□□□□ -0.53
CCDC60-205ENST00000546345 SUPT5HO00267 1087 aaKnown RBP11.75□□□□□ -0.53
CCDC60-205ENST00000546345 RAPGEF3O95398 923 aa11.75□□□□□ -0.53
CCDC60-205ENST00000546345 L3MBTL3Q96JM7 780 aaPredicted RBP11.75□□□□□ -0.53
CCDC60-205ENST00000546345 CFAP74Q9C0B2 1584 aa11.75□□□□□ -0.53
CCDC60-205ENST00000546345 LTBP4Q8N2S1 1624 aa11.75□□□□□ -0.53
CCDC60-205ENST00000546345 PHLDB1Q86UU1 1377 aa11.74□□□□□ -0.53
CCDC60-205ENST00000546345 ATP10BO94823 1461 aa11.74□□□□□ -0.53
CCDC60-205ENST00000546345 GOLGA3Q08378 1498 aa11.74□□□□□ -0.53
CCDC60-205ENST00000546345 G3V3G9 751 aa11.73□□□□□ -0.53
CCDC60-205ENST00000546345 FANCAO15360 1455 aa11.73□□□□□ -0.53
CCDC60-205ENST00000546345 HAP1P54257 671 aaPredicted RBP11.73□□□□□ -0.53
CCDC60-205ENST00000546345 ZFYVE16Q7Z3T8 1539 aa11.73□□□□□ -0.53
CCDC60-205ENST00000546345 RAPGEF6Q8TEU7 1601 aa11.73□□□□□ -0.53
CCDC60-205ENST00000546345 ARHGEF12Q9NZN5 1544 aa11.73□□□□□ -0.53
CCDC60-205ENST00000546345 EFCAB5A4FU69 1503 aa11.72□□□□□ -0.53
CCDC60-205ENST00000546345 BOLA1Q9Y3E2 137 aa11.71□□□□□ -0.53
CCDC60-205ENST00000546345 HECW1Q76N89 1606 aa11.71□□□□□ -0.54
CCDC60-205ENST00000546345 SAMD9Q5K651 1589 aa11.71□□□□□ -0.54
CCDC60-205ENST00000546345 YEATS2Q9ULM3 1422 aa11.7□□□□□ -0.54
CCDC60-205ENST00000546345 FHOD3Q2V2M9 1422 aa11.69□□□□□ -0.54
CCDC60-205ENST00000546345 C3P01024 1663 aa11.69□□□□□ -0.54
CCDC60-205ENST00000546345 SETD1BQ9UPS6 1966 aaKnown RBP11.69□□□□□ -0.54
CCDC60-205ENST00000546345 ARID4BQ4LE39 1312 aaPredicted RBP11.68□□□□□ -0.54
CCDC60-205ENST00000546345 TSHZ2Q9NRE2 1034 aa11.68□□□□□ -0.54
CCDC60-205ENST00000546345 MICALL2Q8IY33 904 aa11.67□□□□□ -0.54
CCDC60-205ENST00000546345 DENND4BO75064 1496 aaPredicted RBP11.67□□□□□ -0.54
CCDC60-205ENST00000546345 IQSEC2Q5JU85 1478 aa11.67□□□□□ -0.54
CCDC60-205ENST00000546345 AKNAQ7Z591 1439 aa11.66□□□□□ -0.54
CCDC60-205ENST00000546345 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.65□□□□□ -0.54
CCDC60-205ENST00000546345 TMEM121BQ9BXQ6 578 aaPredicted RBP11.65□□□□□ -0.54
CCDC60-205ENST00000546345 POGZQ7Z3K3 1410 aa11.65□□□□□ -0.54
CCDC60-205ENST00000546345 MED1Q15648 1581 aaPredicted RBP11.64□□□□□ -0.55
CCDC60-205ENST00000546345 NUP153P49790 1475 aaKnown RBP11.63□□□□□ -0.55
CCDC60-205ENST00000546345 ARID3CA6NKF2 412 aa11.63□□□□□ -0.55
CCDC60-205ENST00000546345 POTEB2H3BUK9 544 aa11.63□□□□□ -0.55
CCDC60-205ENST00000546345 SLC24A1O60721 1099 aa11.62□□□□□ -0.55
CCDC60-205ENST00000546345 MAGI2Q86UL8 1455 aa11.62□□□□□ -0.55
CCDC60-205ENST00000546345 PTPRTO14522 1441 aa11.61□□□□□ -0.55
CCDC60-205ENST00000546345 C3orf67Q6ZVT6 689 aa11.6□□□□□ -0.55
CCDC60-205ENST00000546345 MYO5CQ9NQX4 1742 aa11.6□□□□□ -0.55
CCDC60-205ENST00000546345 UHRF1BP1Q6BDS2 1440 aa11.59□□□□□ -0.55
CCDC60-205ENST00000546345 PRXQ9BXM0 1461 aa11.58□□□□□ -0.56
CCDC60-205ENST00000546345 ABCA6Q8N139 1617 aa11.58□□□□□ -0.56
CCDC60-205ENST00000546345 POTEJP0CG39 1038 aa11.58□□□□□ -0.56
CCDC60-205ENST00000546345 CADPS2Q86UW7 1296 aa11.58□□□□□ -0.56
CCDC60-205ENST00000546345 DIP2CQ9Y2E4 1556 aa11.58□□□□□ -0.56
CCDC60-205ENST00000546345 SUPT6HQ7KZ85 1726 aaKnown RBP11.57□□□□□ -0.56
CCDC60-205ENST00000546345 ZNF142P52746 1687 aaPredicted RBP11.57□□□□□ -0.56
CCDC60-205ENST00000546345 MAMSTRQ6ZN01 415 aa11.57□□□□□ -0.56
CCDC60-205ENST00000546345 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.57□□□□□ -0.56
CCDC60-205ENST00000546345 C9orf84Q5VXU9 1444 aa11.57□□□□□ -0.56
CCDC60-205ENST00000546345 KDM5CP41229 1560 aa11.57□□□□□ -0.56
CCDC60-205ENST00000546345 REREQ9P2R6 1566 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms