RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 STK26Q9P289 416 aa15.33■□□□□ 0.05
NPC1L1-204ENST00000546276 FGD5Q6ZNL6 1462 aa15.33■□□□□ 0.04
NPC1L1-204ENST00000546276 NRDCO43847 1150 aa15.33■□□□□ 0.04
NPC1L1-204ENST00000546276 KIAA2012Q0VF49 1180 aa15.32■□□□□ 0.04
NPC1L1-204ENST00000546276 FANCD2Q9BXW9 1451 aa15.32■□□□□ 0.04
NPC1L1-204ENST00000546276 SYNJ1O43426 1573 aa15.32■□□□□ 0.04
NPC1L1-204ENST00000546276 GGT6Q6P531 493 aa15.32■□□□□ 0.04
NPC1L1-204ENST00000546276 CASKIN1Q8WXD9 1431 aa15.32■□□□□ 0.04
NPC1L1-204ENST00000546276 SYAP1Q96A49 352 aaPredicted RBP15.32■□□□□ 0.04
NPC1L1-204ENST00000546276 COG6Q9Y2V7 657 aa15.3■□□□□ 0.04
NPC1L1-204ENST00000546276 RRP7AQ9Y3A4 280 aaKnown RBP15.3■□□□□ 0.04
NPC1L1-204ENST00000546276 RTF1Q92541 710 aaKnown RBP15.29■□□□□ 0.04
NPC1L1-204ENST00000546276 BRD4O60885 1362 aaPredicted RBP15.29■□□□□ 0.04
NPC1L1-204ENST00000546276 APAF1O14727 1248 aa15.29■□□□□ 0.04
NPC1L1-204ENST00000546276 FOXD4L1Q9NU39 408 aa15.29■□□□□ 0.04
NPC1L1-204ENST00000546276 DRC7Q8IY82 874 aa15.29■□□□□ 0.04
NPC1L1-204ENST00000546276 KIF3BO15066 747 aa15.28■□□□□ 0.04
NPC1L1-204ENST00000546276 NGEFQ8N5V2 710 aa15.28■□□□□ 0.04
NPC1L1-204ENST00000546276 NCOA2Q15596 1464 aa15.28■□□□□ 0.04
NPC1L1-204ENST00000546276 KIAA1211Q6ZU35 1233 aa15.28■□□□□ 0.04
NPC1L1-204ENST00000546276 BCL2L13Q9BXK5 485 aa15.27■□□□□ 0.04
NPC1L1-204ENST00000546276 ZKSCAN2Q63HK3 967 aa15.27■□□□□ 0.04
NPC1L1-204ENST00000546276 TERF2IPQ9NYB0 399 aa15.27■□□□□ 0.04
NPC1L1-204ENST00000546276 FYCO1Q9BQS8 1478 aa15.27■□□□□ 0.04
NPC1L1-204ENST00000546276 NFKBIBQ15653 356 aa15.27■□□□□ 0.03
NPC1L1-204ENST00000546276 PRXQ9BXM0 1461 aa15.27■□□□□ 0.03
NPC1L1-204ENST00000546276 MIA2Q96PC5 1412 aa15.26■□□□□ 0.03
NPC1L1-204ENST00000546276 SPAG9O60271 1321 aaKnown RBP15.26■□□□□ 0.03
NPC1L1-204ENST00000546276 SOX12O15370 315 aa15.26■□□□□ 0.03
NPC1L1-204ENST00000546276 HSP90AA2PQ14568 343 aaPredicted RBP15.25■□□□□ 0.03
NPC1L1-204ENST00000546276 SKOR2Q2VWA4 1001 aaPredicted RBP15.25■□□□□ 0.03
NPC1L1-204ENST00000546276 NAP1L2Q9ULW6 460 aaPredicted RBP15.25■□□□□ 0.03
NPC1L1-204ENST00000546276 WDR97A6NE52 1622 aa15.25■□□□□ 0.03
NPC1L1-204ENST00000546276 NCAPD3P42695 1498 aa15.24■□□□□ 0.03
NPC1L1-204ENST00000546276 HMMRO75330 724 aa15.24■□□□□ 0.03
NPC1L1-204ENST00000546276 JPH4Q96JJ6 628 aa15.24■□□□□ 0.03
NPC1L1-204ENST00000546276 CDK11BP21127 795 aaKnown RBP15.24■□□□□ 0.03
NPC1L1-204ENST00000546276 ST18O60284 1047 aa15.23■□□□□ 0.03
NPC1L1-204ENST00000546276 PAK3O75914 559 aaPredicted RBP15.23■□□□□ 0.03
NPC1L1-204ENST00000546276 HDGFP51858 240 aaKnown RBP15.23■□□□□ 0.03
NPC1L1-204ENST00000546276 ZNF644Q9H582 1327 aaPredicted RBP15.22■□□□□ 0.03
NPC1L1-204ENST00000546276 ARID3AQ99856 593 aa15.22■□□□□ 0.03
NPC1L1-204ENST00000546276 CHMP5Q9NZZ3 219 aa15.22■□□□□ 0.03
NPC1L1-204ENST00000546276 TRAK1Q9UPV9 953 aa15.22■□□□□ 0.03
NPC1L1-204ENST00000546276 AKNAQ7Z591 1439 aa15.21■□□□□ 0.03
NPC1L1-204ENST00000546276 DDX49Q9Y6V7 483 aaKnown RBP15.21■□□□□ 0.03
NPC1L1-204ENST00000546276 RAD54L2Q9Y4B4 1467 aa15.21■□□□□ 0.03
NPC1L1-204ENST00000546276 LMOD3Q0VAK6 560 aa15.21■□□□□ 0.03
NPC1L1-204ENST00000546276 GAPVD1Q14C86 1478 aa15.2■□□□□ 0.02
NPC1L1-204ENST00000546276 HFM1A2PYH4 1435 aa15.2■□□□□ 0.02
NPC1L1-204ENST00000546276 SMG6Q86US8 1419 aaKnown RBP15.2■□□□□ 0.02
NPC1L1-204ENST00000546276 TIAM1Q13009 1591 aa15.19■□□□□ 0.02
NPC1L1-204ENST00000546276 ANKRD45Q5TZF3 282 aa15.19■□□□□ 0.02
NPC1L1-204ENST00000546276 STK31Q9BXU1 1019 aa15.19■□□□□ 0.02
NPC1L1-204ENST00000546276 TAOK2Q9UL54 1235 aa15.19■□□□□ 0.02
NPC1L1-204ENST00000546276 CDCA7LQ96GN5 454 aa15.18■□□□□ 0.02
NPC1L1-204ENST00000546276 DDX19BQ9UMR2 479 aa15.18■□□□□ 0.02
NPC1L1-204ENST00000546276 TRIM6-TRIM34B2RNG4 842 aa15.18■□□□□ 0.02
NPC1L1-204ENST00000546276 A0A0G2JS52 829 aa15.18■□□□□ 0.02
NPC1L1-204ENST00000546276 PHF14O94880 888 aa15.18■□□□□ 0.02
NPC1L1-204ENST00000546276 AAMPQ13685 434 aa15.17■□□□□ 0.02
NPC1L1-204ENST00000546276 LMOD2Q6P5Q4 547 aa15.17■□□□□ 0.02
NPC1L1-204ENST00000546276 ANKRD50Q9ULJ7 1429 aa15.17■□□□□ 0.02
NPC1L1-204ENST00000546276 DZIP1LQ8IYY4 767 aaKnown RBP15.17■□□□□ 0.02
NPC1L1-204ENST00000546276 CCDC184Q52MB2 194 aa15.17■□□□□ 0.02
NPC1L1-204ENST00000546276 TOP2BQ02880 1626 aa15.16■□□□□ 0.02
NPC1L1-204ENST00000546276 HTATSF1O43719 755 aaKnown RBP15.16■□□□□ 0.02
NPC1L1-204ENST00000546276 NBPF8Q3BBV2 869 aa15.16■□□□□ 0.02
NPC1L1-204ENST00000546276 PNISRQ8TF01 805 aaKnown RBP15.16■□□□□ 0.02
NPC1L1-204ENST00000546276 BACH2Q9BYV9 841 aa15.16■□□□□ 0.02
NPC1L1-204ENST00000546276 CSPP1Q1MSJ5 1256 aa15.16■□□□□ 0.02
NPC1L1-204ENST00000546276 ADAMTS8Q9UP79 889 aa15.15■□□□□ 0.02
NPC1L1-204ENST00000546276 CFTRP13569 1480 aa15.15■□□□□ 0.02
NPC1L1-204ENST00000546276 NOL8Q76FK4 1167 aaKnown RBP15.15■□□□□ 0.02
NPC1L1-204ENST00000546276 SLC4A10Q6U841 1118 aa15.14■□□□□ 0.01
NPC1L1-204ENST00000546276 RUNDC1Q96C34 613 aa15.14■□□□□ 0.01
NPC1L1-204ENST00000546276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.14■□□□□ 0.01
NPC1L1-204ENST00000546276 EFCAB5A4FU69 1503 aa15.13■□□□□ 0.01
NPC1L1-204ENST00000546276 MSH5O43196 834 aa15.13■□□□□ 0.01
NPC1L1-204ENST00000546276 NUTM2DQ5VT03 806 aaPredicted RBP15.13■□□□□ 0.01
NPC1L1-204ENST00000546276 FOXD4L5Q5VV16 416 aaPredicted RBP15.13■□□□□ 0.01
NPC1L1-204ENST00000546276 FOXD4L4Q8WXT5 416 aaPredicted RBP15.13■□□□□ 0.01
NPC1L1-204ENST00000546276 CHMP4AQ9BY43 222 aa15.13■□□□□ 0.01
NPC1L1-204ENST00000546276 PANK1Q8TE04 598 aa15.12■□□□□ 0.01
NPC1L1-204ENST00000546276 C22orf23Q9BZE7 217 aa15.12■□□□□ 0.01
NPC1L1-204ENST00000546276 EVC2Q86UK5 1308 aa15.12■□□□□ 0.01
NPC1L1-204ENST00000546276 WASHC2CQ9Y4E1 1318 aa15.12■□□□□ 0.01
NPC1L1-204ENST00000546276 MLECQ14165 292 aa15.12■□□□□ 0.01
NPC1L1-204ENST00000546276 ELL2O00472 640 aaPredicted RBP15.11■□□□□ 0.01
NPC1L1-204ENST00000546276 VSIG10Q8N0Z9 540 aa15.11■□□□□ 0.01
NPC1L1-204ENST00000546276 STAC3Q96MF2 364 aa15.11■□□□□ 0.01
NPC1L1-204ENST00000546276 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.11■□□□□ 0.01
NPC1L1-204ENST00000546276 BRPF3Q9ULD4 1205 aa15.11■□□□□ 0.01
NPC1L1-204ENST00000546276 IL27Q8NEV9 243 aa15.1■□□□□ 0.01
NPC1L1-204ENST00000546276 GPATCH3Q96I76 525 aa15.1■□□□□ 0.01
NPC1L1-204ENST00000546276 FRAT2O75474 233 aaPredicted RBP15.1■□□□□ 0.01
NPC1L1-204ENST00000546276 EHBP1L1Q8N3D4 1523 aa15.1■□□□□ 0.01
NPC1L1-204ENST00000546276 PTPRGP23470 1445 aa15.09■□□□□ 0.01
NPC1L1-204ENST00000546276 HDAC5Q9UQL6 1122 aa15.08■□□□□ 0
NPC1L1-204ENST00000546276 MRE11P49959 708 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms