RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 THSD4Q6ZMP0 1018 aa7.04□□□□□ -1.28
CUL3-215ENST00000546102 BHMG1C9JSJ3 638 aaPredicted RBP7.03□□□□□ -1.28
CUL3-215ENST00000546102 ADAM33Q9BZ11 813 aa7.03□□□□□ -1.28
CUL3-215ENST00000546102 MFSD10Q14728 455 aa7.02□□□□□ -1.29
CUL3-215ENST00000546102 PPP1R3GB7ZBB8 358 aa7.01□□□□□ -1.29
CUL3-215ENST00000546102 FBXW7Q969H0 707 aa7.01□□□□□ -1.29
CUL3-215ENST00000546102 RGS20O76081 388 aa7□□□□□ -1.29
CUL3-215ENST00000546102 TYW1BQ6NUM6 668 aa7□□□□□ -1.29
CUL3-215ENST00000546102 ANKK1Q8NFD2 765 aa7□□□□□ -1.29
CUL3-215ENST00000546102 PHF14O94880 888 aa6.99□□□□□ -1.29
CUL3-215ENST00000546102 IFFO2Q5TF58 517 aa6.99□□□□□ -1.29
CUL3-215ENST00000546102 RABGEF1Q9UJ41 708 aa6.99□□□□□ -1.29
CUL3-215ENST00000546102 EMILIN3Q9NT22 766 aa6.98□□□□□ -1.29
CUL3-215ENST00000546102 PCDHGA10Q9Y5H3 936 aa6.98□□□□□ -1.29
CUL3-215ENST00000546102 EPAS1Q99814 870 aa6.96□□□□□ -1.3
CUL3-215ENST00000546102 TSHZ2Q9NRE2 1034 aa6.96□□□□□ -1.3
CUL3-215ENST00000546102 PROX2Q3B8N5 592 aa6.95□□□□□ -1.3
CUL3-215ENST00000546102 LAPTM4BQ86VI4 370 aa6.95□□□□□ -1.3
CUL3-215ENST00000546102 SPRYD3Q8NCJ5 442 aa6.95□□□□□ -1.3
CUL3-215ENST00000546102 A0A0G2JS52 829 aa6.94□□□□□ -1.3
CUL3-215ENST00000546102 NYAP1Q6ZVC0 841 aa6.94□□□□□ -1.3
CUL3-215ENST00000546102 ONECUT3O60422 494 aaPredicted RBP6.93□□□□□ -1.3
CUL3-215ENST00000546102 IRX2Q9BZI1 471 aaPredicted RBP6.93□□□□□ -1.3
CUL3-215ENST00000546102 DPYSL4O14531 572 aa6.92□□□□□ -1.3
CUL3-215ENST00000546102 COL9A1P20849 921 aa6.92□□□□□ -1.3
CUL3-215ENST00000546102 KIAA1468Q9P260 1216 aa6.92□□□□□ -1.3
CUL3-215ENST00000546102 SOWAHBA6NEL2 793 aa6.91□□□□□ -1.3
CUL3-215ENST00000546102 C6orf132Q5T0Z8 1188 aa6.91□□□□□ -1.3
CUL3-215ENST00000546102 CADPS2Q86UW7 1296 aa6.91□□□□□ -1.3
CUL3-215ENST00000546102 ZFRQ96KR1 1074 aaKnown RBP6.91□□□□□ -1.3
CUL3-215ENST00000546102 BCAMP50895 628 aa6.9□□□□□ -1.3
CUL3-215ENST00000546102 CAMK2BQ13554 666 aa6.9□□□□□ -1.3
CUL3-215ENST00000546102 RBM33Q96EV2 1170 aaKnown RBP6.9□□□□□ -1.3
CUL3-215ENST00000546102 TRIM6-TRIM34B2RNG4 842 aa6.89□□□□□ -1.31
CUL3-215ENST00000546102 ITGBL1O95965 494 aaPredicted RBP6.88□□□□□ -1.31
CUL3-215ENST00000546102 NBR1Q14596 966 aa6.88□□□□□ -1.31
CUL3-215ENST00000546102 FAM98CQ17RN3 349 aaKnown RBP6.88□□□□□ -1.31
CUL3-215ENST00000546102 DDX12PQ92771 950 aa6.88□□□□□ -1.31
CUL3-215ENST00000546102 LRCH3Q96II8 777 aa6.88□□□□□ -1.31
CUL3-215ENST00000546102 SEPT9Q9UHD8 586 aaPredicted RBP6.88□□□□□ -1.31
CUL3-215ENST00000546102 MAP3K7O43318 606 aa6.87□□□□□ -1.31
CUL3-215ENST00000546102 KCNC4Q03721 635 aa6.87□□□□□ -1.31
CUL3-215ENST00000546102 PACS2Q86VP3 889 aa6.87□□□□□ -1.31
CUL3-215ENST00000546102 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.87□□□□□ -1.31
CUL3-215ENST00000546102 TSR3Q9UJK0 312 aaKnown RBP6.86□□□□□ -1.31
CUL3-215ENST00000546102 SPDYE16A6NNV3 312 aaPredicted RBP6.85□□□□□ -1.31
CUL3-215ENST00000546102 WDR70Q9NW82 654 aa6.85□□□□□ -1.31
CUL3-215ENST00000546102 WBP1LQ9NX94 342 aa6.85□□□□□ -1.31
CUL3-215ENST00000546102 TIMELESSQ9UNS1 1208 aa6.85□□□□□ -1.31
CUL3-215ENST00000546102 HPS5Q9UPZ3 1129 aa6.85□□□□□ -1.31
CUL3-215ENST00000546102 EN1Q05925 392 aaPredicted RBP6.84□□□□□ -1.31
CUL3-215ENST00000546102 TULP1O00294 542 aaPredicted RBP6.83□□□□□ -1.32
CUL3-215ENST00000546102 PPP4CP60510 307 aa6.83□□□□□ -1.32
CUL3-215ENST00000546102 CERKQ8TCT0 537 aa6.83□□□□□ -1.32
CUL3-215ENST00000546102 HDGFP51858 240 aaKnown RBP6.82□□□□□ -1.32
CUL3-215ENST00000546102 PDIA6Q15084 440 aa6.82□□□□□ -1.32
CUL3-215ENST00000546102 E2F4Q16254 413 aa6.8□□□□□ -1.32
CUL3-215ENST00000546102 TSR1Q2NL82 804 aaKnown RBP6.8□□□□□ -1.32
CUL3-215ENST00000546102 Q6ZNB5 142 aa6.8□□□□□ -1.32
CUL3-215ENST00000546102 GRXCR2A6NFK2 248 aa6.79□□□□□ -1.32
CUL3-215ENST00000546102 NBPF26B4DH59 902 aa6.79□□□□□ -1.32
CUL3-215ENST00000546102 CDCA7LQ96GN5 454 aa6.79□□□□□ -1.32
CUL3-215ENST00000546102 TSKSQ9UJT2 592 aa6.79□□□□□ -1.32
CUL3-215ENST00000546102 RNF40O75150 1001 aa6.78□□□□□ -1.32
CUL3-215ENST00000546102 PRSS12P56730 875 aa6.78□□□□□ -1.32
CUL3-215ENST00000546102 GTF3C3Q9Y5Q9 886 aa6.78□□□□□ -1.32
CUL3-215ENST00000546102 LAPTM4AQ15012 233 aa6.77□□□□□ -1.33
CUL3-215ENST00000546102 NECTIN2Q92692 538 aa6.77□□□□□ -1.33
CUL3-215ENST00000546102 PNMA3Q9UL41 463 aa6.77□□□□□ -1.33
CUL3-215ENST00000546102 SLC4A3P48751 1232 aa6.76□□□□□ -1.33
CUL3-215ENST00000546102 SAMD7Q7Z3H4 446 aa6.76□□□□□ -1.33
CUL3-215ENST00000546102 SMAPO00193 183 aa6.75□□□□□ -1.33
CUL3-215ENST00000546102 TATDN2Q93075 761 aa6.75□□□□□ -1.33
CUL3-215ENST00000546102 IL21Q9HBE4 155 aa6.74□□□□□ -1.33
CUL3-215ENST00000546102 ARIH1Q9Y4X5 557 aaPredicted RBP6.73□□□□□ -1.33
CUL3-215ENST00000546102 NUDT18Q6ZVK8 323 aa6.72□□□□□ -1.33
CUL3-215ENST00000546102 RBM27Q9P2N5 1060 aaKnown RBP6.72□□□□□ -1.33
CUL3-215ENST00000546102 MTRQ99707 1265 aa6.71□□□□□ -1.34
CUL3-215ENST00000546102 GFRA3O60609 400 aa6.7□□□□□ -1.34
CUL3-215ENST00000546102 GGCXP38435 758 aa6.7□□□□□ -1.34
CUL3-215ENST00000546102 TJAP1Q5JTD0 557 aa6.7□□□□□ -1.34
CUL3-215ENST00000546102 SLF2Q8IX21 1173 aa6.7□□□□□ -1.34
CUL3-215ENST00000546102 PRKD2Q9BZL6 878 aa6.69□□□□□ -1.34
CUL3-215ENST00000546102 OSBPP22059 807 aa6.68□□□□□ -1.34
CUL3-215ENST00000546102 ARXQ96QS3 562 aa6.68□□□□□ -1.34
CUL3-215ENST00000546102 CDHR5Q9HBB8 845 aa6.68□□□□□ -1.34
CUL3-215ENST00000546102 FAM198AQ9UFP1 575 aa6.68□□□□□ -1.34
CUL3-215ENST00000546102 PPP1R18Q6NYC8 613 aa6.67□□□□□ -1.34
CUL3-215ENST00000546102 ERICH6Q7L0X2 663 aa6.67□□□□□ -1.34
CUL3-215ENST00000546102 PRR14Q9BWN1 585 aa6.67□□□□□ -1.34
CUL3-215ENST00000546102 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.67□□□□□ -1.34
CUL3-215ENST00000546102 V9GY48 417 aaPredicted RBP6.67□□□□□ -1.34
CUL3-215ENST00000546102 PADI6Q6TGC4 694 aa6.66□□□□□ -1.34
CUL3-215ENST00000546102 PRIM1P49642 420 aaKnown RBP6.65□□□□□ -1.34
CUL3-215ENST00000546102 APLP1P51693 650 aa6.65□□□□□ -1.34
CUL3-215ENST00000546102 TMEM132AQ24JP5 1023 aa6.65□□□□□ -1.34
CUL3-215ENST00000546102 SWT1Q5T5J6 900 aaKnown RBP6.65□□□□□ -1.34
CUL3-215ENST00000546102 TRAF7Q6Q0C0 670 aa6.65□□□□□ -1.34
CUL3-215ENST00000546102 DAXXQ9UER7 740 aaPredicted RBP6.65□□□□□ -1.34
CUL3-215ENST00000546102 NRG2O14511 850 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms