RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 KANK4Q5T7N3 995 aaPredicted RBP14.56□□□□□ -0.08
CIT-217ENST00000545913 KIF16BQ96L93 1317 aa14.55□□□□□ -0.08
CIT-217ENST00000545913 GOLGA6L3A6NEY3 463 aa14.55□□□□□ -0.08
CIT-217ENST00000545913 GOLGA6L1Q8N7Z2 621 aa14.55□□□□□ -0.08
CIT-217ENST00000545913 KIF3BO15066 747 aa14.54□□□□□ -0.08
CIT-217ENST00000545913 CCDC144AA2RUR9 1427 aa14.54□□□□□ -0.08
CIT-217ENST00000545913 KAT6BQ8WYB5 2073 aa14.54□□□□□ -0.08
CIT-217ENST00000545913 SMARCA4P51532 1647 aa14.54□□□□□ -0.08
CIT-217ENST00000545913 AMPHP49418 695 aa14.54□□□□□ -0.08
CIT-217ENST00000545913 SLC4A10Q6U841 1118 aa14.54□□□□□ -0.08
CIT-217ENST00000545913 NGDNQ8NEJ9 315 aaKnown RBP14.54□□□□□ -0.08
CIT-217ENST00000545913 WASHC2CQ9Y4E1 1318 aa14.54□□□□□ -0.08
CIT-217ENST00000545913 RASSF8Q8NHQ8 419 aa14.53□□□□□ -0.08
CIT-217ENST00000545913 IPO9Q96P70 1041 aaKnown RBP14.53□□□□□ -0.08
CIT-217ENST00000545913 G3V3G9 751 aa14.52□□□□□ -0.09
CIT-217ENST00000545913 DCAF8Q5TAQ9 597 aa14.52□□□□□ -0.09
CIT-217ENST00000545913 CHMP4CQ96CF2 233 aa14.52□□□□□ -0.09
CIT-217ENST00000545913 DDX11L8A8MPP1 907 aa14.5□□□□□ -0.09
CIT-217ENST00000545913 MYBBP1AQ9BQG0 1328 aaKnown RBP14.5□□□□□ -0.09
CIT-217ENST00000545913 CCDC146Q8IYE0 955 aa14.5□□□□□ -0.09
CIT-217ENST00000545913 A0A0U1RQG5 324 aaPredicted RBP14.49□□□□□ -0.09
CIT-217ENST00000545913 TDRD9Q8NDG6 1382 aaKnown RBP14.49□□□□□ -0.09
CIT-217ENST00000545913 FHOD3Q2V2M9 1422 aa14.49□□□□□ -0.09
CIT-217ENST00000545913 HNRNPMP52272 730 aaKnown RBP eCLIP14.49□□□□□ -0.095e-6■■■■□ 21.1
CIT-217ENST00000545913 L3MBTL2Q969R5 705 aa14.48□□□□□ -0.09
CIT-217ENST00000545913 CGNL1Q0VF96 1302 aa14.48□□□□□ -0.09
CIT-217ENST00000545913 CCDC9Q9Y3X0 531 aaKnown RBP14.48□□□□□ -0.09
CIT-217ENST00000545913 ATP6V1DQ9Y5K8 247 aa14.47□□□□□ -0.09
CIT-217ENST00000545913 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.47□□□□□ -0.09
CIT-217ENST00000545913 LRRFIP1Q32MZ4 808 aaKnown RBP14.47□□□□□ -0.09
CIT-217ENST00000545913 FRAT2O75474 233 aaPredicted RBP14.47□□□□□ -0.09
CIT-217ENST00000545913 SF3A1Q15459 793 aaKnown RBP14.47□□□□□ -0.09
CIT-217ENST00000545913 CENPQQ7L2Z9 268 aaPredicted RBP14.47□□□□□ -0.09
CIT-217ENST00000545913 TPM3P06753 285 aa14.46□□□□□ -0.09
CIT-217ENST00000545913 CLUAP1Q96AJ1 413 aa14.46□□□□□ -0.09
CIT-217ENST00000545913 CEP89Q96ST8 783 aa14.46□□□□□ -0.09
CIT-217ENST00000545913 H3BQV1 296 aa14.45□□□□□ -0.1
CIT-217ENST00000545913 IFFO2Q5TF58 517 aa14.45□□□□□ -0.1
CIT-217ENST00000545913 CUX1P39880 1505 aa14.45□□□□□ -0.1
CIT-217ENST00000545913 GTF2E1P29083 439 aaPredicted RBP14.45□□□□□ -0.1
CIT-217ENST00000545913 EVC2Q86UK5 1308 aa14.44□□□□□ -0.1
CIT-217ENST00000545913 TSR1Q2NL82 804 aaKnown RBP14.44□□□□□ -0.1
CIT-217ENST00000545913 CREBRFQ8IUR6 639 aa14.43□□□□□ -0.1
CIT-217ENST00000545913 C1orf141Q5JVX7 400 aa14.43□□□□□ -0.1
CIT-217ENST00000545913 E9PSI1 815 aa14.42□□□□□ -0.1
CIT-217ENST00000545913 TOMM22Q9NS69 142 aa14.42□□□□□ -0.1
CIT-217ENST00000545913 NOL8Q76FK4 1167 aaKnown RBP14.42□□□□□ -0.1
CIT-217ENST00000545913 TNNT3P45378 269 aaPredicted RBP14.42□□□□□ -0.1
CIT-217ENST00000545913 MARCH6O60337 910 aa14.42□□□□□ -0.1
CIT-217ENST00000545913 TPD52L1Q16890 204 aaPredicted RBP14.42□□□□□ -0.1
CIT-217ENST00000545913 ROCK1Q13464 1354 aa14.42□□□□□ -0.1
CIT-217ENST00000545913 GOLGA6L19H0YKK7 550 aa14.41□□□□□ -0.1
CIT-217ENST00000545913 FAM184AQ8NB25 1140 aa14.41□□□□□ -0.1
CIT-217ENST00000545913 LTV1Q96GA3 475 aaPredicted RBP14.41□□□□□ -0.1
CIT-217ENST00000545913 COG3Q96JB2 828 aa14.41□□□□□ -0.1
CIT-217ENST00000545913 AKAP17AQ02040 695 aaKnown RBP14.41□□□□□ -0.1
CIT-217ENST00000545913 SKOR2Q2VWA4 1001 aaPredicted RBP14.41□□□□□ -0.1
CIT-217ENST00000545913 TRAK1Q9UPV9 953 aa14.41□□□□□ -0.1
CIT-217ENST00000545913 VPS53Q5VIR6 699 aa14.4□□□□□ -0.1
CIT-217ENST00000545913 PRM3Q9NNZ6 103 aa14.4□□□□□ -0.1
CIT-217ENST00000545913 FAM161AQ3B820 660 aa14.4□□□□□ -0.1
CIT-217ENST00000545913 RILPL2Q969X0 211 aa14.4□□□□□ -0.1
CIT-217ENST00000545913 USP47Q96K76 1375 aa14.4□□□□□ -0.1
CIT-217ENST00000545913 TPM2P07951 284 aa14.4□□□□□ -0.1
CIT-217ENST00000545913 TPM1P09493 284 aa14.4□□□□□ -0.11
CIT-217ENST00000545913 ZBED9Q6R2W3 1325 aa14.39□□□□□ -0.11
CIT-217ENST00000545913 ARID3AQ99856 593 aa14.39□□□□□ -0.11
CIT-217ENST00000545913 VGFO15240 615 aaPredicted RBP14.39□□□□□ -0.11
CIT-217ENST00000545913 NEXNQ0ZGT2 675 aa14.39□□□□□ -0.11
CIT-217ENST00000545913 ANKRD45Q5TZF3 282 aa14.39□□□□□ -0.11
CIT-217ENST00000545913 PANK3Q9H999 370 aa14.39□□□□□ -0.11
CIT-217ENST00000545913 NUTM2DQ5VT03 806 aaPredicted RBP14.38□□□□□ -0.11
CIT-217ENST00000545913 ZKSCAN2Q63HK3 967 aa14.38□□□□□ -0.11
CIT-217ENST00000545913 FOXD4L1Q9NU39 408 aa14.38□□□□□ -0.11
CIT-217ENST00000545913 ST20-MTHFSA0A0A6YYL1 179 aa14.38□□□□□ -0.11
CIT-217ENST00000545913 PES1O00541 588 aaKnown RBP14.38□□□□□ -0.11
CIT-217ENST00000545913 CADPSQ9ULU8 1353 aa14.38□□□□□ -0.11
CIT-217ENST00000545913 RUFY2Q8WXA3 655 aa14.38□□□□□ -0.11
CIT-217ENST00000545913 AMER1Q5JTC6 1135 aaPredicted RBP14.38□□□□□ -0.11
CIT-217ENST00000545913 REC8O95072 547 aa14.37□□□□□ -0.11
CIT-217ENST00000545913 AMOTL1Q8IY63 956 aa14.37□□□□□ -0.11
CIT-217ENST00000545913 SYNE3Q6ZMZ3 975 aa14.37□□□□□ -0.11
CIT-217ENST00000545913 CPLX2Q6PUV4 134 aaKnown RBP14.36□□□□□ -0.11
CIT-217ENST00000545913 NGEFQ8N5V2 710 aa14.36□□□□□ -0.11
CIT-217ENST00000545913 DIAPH3Q9NSV4 1193 aa14.36□□□□□ -0.11
CIT-217ENST00000545913 CCDC70Q6NSX1 233 aa14.36□□□□□ -0.11
CIT-217ENST00000545913 TEFQ10587 303 aa14.36□□□□□ -0.11
CIT-217ENST00000545913 RRP7AQ9Y3A4 280 aaKnown RBP14.36□□□□□ -0.11
CIT-217ENST00000545913 BECN2A8MW95 431 aa14.35□□□□□ -0.11
CIT-217ENST00000545913 JPH4Q96JJ6 628 aa14.35□□□□□ -0.11
CIT-217ENST00000545913 C9orf78Q9NZ63 289 aaPredicted RBP14.35□□□□□ -0.11
CIT-217ENST00000545913 NOL10Q9BSC4 688 aaKnown RBP14.35□□□□□ -0.11
CIT-217ENST00000545913 EVA1CP58658 441 aa14.34□□□□□ -0.11
CIT-217ENST00000545913 NUTM2FA1L443 756 aa14.34□□□□□ -0.11
CIT-217ENST00000545913 RRP1P56182 461 aaKnown RBP14.34□□□□□ -0.11
CIT-217ENST00000545913 DDX49Q9Y6V7 483 aaKnown RBP14.34□□□□□ -0.11
CIT-217ENST00000545913 DDX19BQ9UMR2 479 aa14.34□□□□□ -0.11
CIT-217ENST00000545913 TTC5Q8N0Z6 440 aa14.34□□□□□ -0.11
CIT-217ENST00000545913 ZKSCAN1P17029 563 aaPredicted RBP14.33□□□□□ -0.12
CIT-217ENST00000545913 FOXD4L5Q5VV16 416 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms