RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 DNMT1P26358 1616 aaKnown RBP19.68■□□□□ 0.74
ACTN1-206ENST00000544964 A2ML1A8K2U0 1454 aa19.67■□□□□ 0.74
ACTN1-206ENST00000544964 PZPP20742 1482 aa19.67■□□□□ 0.74
ACTN1-206ENST00000544964 IQSEC2Q5JU85 1478 aa19.67■□□□□ 0.74
ACTN1-206ENST00000544964 POLR1AO95602 1720 aaPredicted RBP19.65■□□□□ 0.74
ACTN1-206ENST00000544964 RSPH4AQ5TD94 716 aa19.65■□□□□ 0.74
ACTN1-206ENST00000544964 KIF3BO15066 747 aa19.64■□□□□ 0.73
ACTN1-206ENST00000544964 KANK4Q5T7N3 995 aaPredicted RBP19.64■□□□□ 0.73
ACTN1-206ENST00000544964 NCKAP5LQ9HCH0 1330 aa19.64■□□□□ 0.73
ACTN1-206ENST00000544964 MYOM3Q5VTT5 1437 aa19.64■□□□□ 0.73
ACTN1-206ENST00000544964 MROH1Q8NDA8 1641 aa19.64■□□□□ 0.73
ACTN1-206ENST00000544964 EIF2AK4Q9P2K8 1649 aaKnown RBP19.64■□□□□ 0.73
ACTN1-206ENST00000544964 ZC3H13Q5T200 1668 aaKnown RBP19.62■□□□□ 0.73
ACTN1-206ENST00000544964 NEURL4Q96JN8 1562 aa19.62■□□□□ 0.73
ACTN1-206ENST00000544964 MIA2Q96PC5 1412 aa19.62■□□□□ 0.73
ACTN1-206ENST00000544964 CROCC2H7BZ55 1655 aa19.62■□□□□ 0.73
ACTN1-206ENST00000544964 TNRQ92752 1358 aa19.6■□□□□ 0.73
ACTN1-206ENST00000544964 ABCC3O15438 1527 aa19.6■□□□□ 0.73
ACTN1-206ENST00000544964 ZNF335Q9H4Z2 1342 aaPredicted RBP19.59■□□□□ 0.73
ACTN1-206ENST00000544964 PKD2Q13563 968 aa19.59■□□□□ 0.73
ACTN1-206ENST00000544964 FBXO31Q5XUX0 539 aaPredicted RBP19.58■□□□□ 0.72
ACTN1-206ENST00000544964 CEP152O94986 1710 aa19.56■□□□□ 0.72
ACTN1-206ENST00000544964 TSPY4P0CV99 314 aa19.56■□□□□ 0.72
ACTN1-206ENST00000544964 TSPY10P0CW01 314 aa19.56■□□□□ 0.72
ACTN1-206ENST00000544964 SPATA31D1Q6ZQQ2 1576 aa19.56■□□□□ 0.72
ACTN1-206ENST00000544964 WASHC2CQ9Y4E1 1318 aa19.55■□□□□ 0.72
ACTN1-206ENST00000544964 NLRP1Q9C000 1473 aa19.55■□□□□ 0.72
ACTN1-206ENST00000544964 PTPN23Q9H3S7 1636 aa19.54■□□□□ 0.72
ACTN1-206ENST00000544964 SHANK2Q9UPX8 1470 aa19.54■□□□□ 0.72
ACTN1-206ENST00000544964 DUOX2Q9NRD8 1548 aa19.53■□□□□ 0.72
ACTN1-206ENST00000544964 UGGT1Q9NYU2 1555 aa19.53■□□□□ 0.72
ACTN1-206ENST00000544964 PRDM15P57071 1507 aaPredicted RBP19.52■□□□□ 0.72
ACTN1-206ENST00000544964 DEPDC5O75140 1603 aa19.51■□□□□ 0.71
ACTN1-206ENST00000544964 ERVK-7P63135 1459 aa19.51■□□□□ 0.71
ACTN1-206ENST00000544964 ABCC5O15440 1437 aa19.51■□□□□ 0.71
ACTN1-206ENST00000544964 VWDEQ8N2E2 1590 aa19.49■□□□□ 0.71
ACTN1-206ENST00000544964 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.48■□□□□ 0.71
ACTN1-206ENST00000544964 KIF15Q9NS87 1388 aa19.47■□□□□ 0.71
ACTN1-206ENST00000544964 DAPK1P53355 1430 aa19.47■□□□□ 0.71
ACTN1-206ENST00000544964 FGD6Q6ZV73 1430 aa19.47■□□□□ 0.71
ACTN1-206ENST00000544964 ERBINQ96RT1 1412 aa19.47■□□□□ 0.71
ACTN1-206ENST00000544964 MED14O60244 1454 aa19.47■□□□□ 0.71
ACTN1-206ENST00000544964 CFAP65Q6ZU64 1925 aaKnown RBP19.47■□□□□ 0.71
ACTN1-206ENST00000544964 IQGAP1P46940 1657 aa19.46■□□□□ 0.71
ACTN1-206ENST00000544964 UBR1Q8IWV7 1749 aa19.46■□□□□ 0.71
ACTN1-206ENST00000544964 CPS1P31327 1500 aa19.45■□□□□ 0.7
ACTN1-206ENST00000544964 NPHP4O75161 1426 aaPredicted RBP19.42■□□□□ 0.7
ACTN1-206ENST00000544964 STRCP1A6NGW2 1772 aa19.42■□□□□ 0.7
ACTN1-206ENST00000544964 ARHGAP31Q2M1Z3 1444 aa19.41■□□□□ 0.7
ACTN1-206ENST00000544964 THEMISQ8N1K5 641 aaPredicted RBP19.4■□□□□ 0.7
ACTN1-206ENST00000544964 DISP3Q9P2K9 1392 aa19.4■□□□□ 0.7
ACTN1-206ENST00000544964 UBAP1LF5GYI3 381 aa19.39■□□□□ 0.69
ACTN1-206ENST00000544964 APLP2Q06481 763 aa19.39■□□□□ 0.69
ACTN1-206ENST00000544964 ANKLE2Q86XL3 938 aa19.39■□□□□ 0.69
ACTN1-206ENST00000544964 ALKQ9UM73 1620 aa19.38■□□□□ 0.69
ACTN1-206ENST00000544964 PIK3C2BO00750 1634 aa19.36■□□□□ 0.69
ACTN1-206ENST00000544964 SLIT1O75093 1534 aa19.36■□□□□ 0.69
ACTN1-206ENST00000544964 LMTK2Q8IWU2 1503 aa19.36■□□□□ 0.69
ACTN1-206ENST00000544964 ARHGAP23Q9P227 1491 aa19.36■□□□□ 0.69
ACTN1-206ENST00000544964 RRP7BPQ9NSQ0 103 aa19.36■□□□□ 0.69
ACTN1-206ENST00000544964 SYNMO15061 1565 aa19.36■□□□□ 0.69
ACTN1-206ENST00000544964 ADGRL2O95490 1459 aa19.35■□□□□ 0.69
ACTN1-206ENST00000544964 ILDR2Q71H61 639 aa19.34■□□□□ 0.69
ACTN1-206ENST00000544964 SCAF11Q99590 1463 aaKnown RBP19.34■□□□□ 0.69
ACTN1-206ENST00000544964 KDM5AP29375 1690 aaKnown RBP19.33■□□□□ 0.68
ACTN1-206ENST00000544964 ANKRD30AQ9BXX3 1397 aa19.32■□□□□ 0.68
ACTN1-206ENST00000544964 EFCAB6Q5THR3 1501 aa19.32■□□□□ 0.68
ACTN1-206ENST00000544964 LRRC7Q96NW7 1537 aa19.29■□□□□ 0.68
ACTN1-206ENST00000544964 CHIC2Q9UKJ5 165 aa19.28■□□□□ 0.68
ACTN1-206ENST00000544964 KANK1Q14678 1352 aa19.28■□□□□ 0.68
ACTN1-206ENST00000544964 PPARGC1BQ86YN6 1023 aaKnown RBP19.27■□□□□ 0.68
ACTN1-206ENST00000544964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.27■□□□□ 0.683e-7■□□□□ 9.1
ACTN1-206ENST00000544964 XIRP1Q702N8 1843 aaKnown RBP19.27■□□□□ 0.68
ACTN1-206ENST00000544964 NOS1P29475 1434 aa19.25■□□□□ 0.67
ACTN1-206ENST00000544964 LTKP29376 864 aa19.25■□□□□ 0.67
ACTN1-206ENST00000544964 ADGRB3O60242 1522 aa19.25■□□□□ 0.67
ACTN1-206ENST00000544964 TMEM2Q9UHN6 1383 aa19.24■□□□□ 0.67
ACTN1-206ENST00000544964 UNC13BO14795 1591 aa19.23■□□□□ 0.67
ACTN1-206ENST00000544964 MED1Q15648 1581 aaPredicted RBP19.23■□□□□ 0.67
ACTN1-206ENST00000544964 TET3O43151 1660 aa19.22■□□□□ 0.67
ACTN1-206ENST00000544964 TOM1O60784 492 aa19.22■□□□□ 0.67
ACTN1-206ENST00000544964 HSPA1LP34931 641 aa19.22■□□□□ 0.67
ACTN1-206ENST00000544964 PIP4K2BP78356 416 aa19.22■□□□□ 0.67
ACTN1-206ENST00000544964 ANKRD50Q9ULJ7 1429 aa19.22■□□□□ 0.67
ACTN1-206ENST00000544964 SCAF1Q9H7N4 1312 aaKnown RBP19.21■□□□□ 0.67
ACTN1-206ENST00000544964 GCC2Q8IWJ2 1684 aa19.2■□□□□ 0.66
ACTN1-206ENST00000544964 RPRD2Q5VT52 1461 aaKnown RBP19.2■□□□□ 0.66
ACTN1-206ENST00000544964 MYO5BQ9ULV0 1848 aa19.2■□□□□ 0.66
ACTN1-206ENST00000544964 FAM50AQ14320 339 aaKnown RBP19.19■□□□□ 0.66
ACTN1-206ENST00000544964 TXNDC2Q86VQ3 553 aa19.19■□□□□ 0.66
ACTN1-206ENST00000544964 SOCS7O14512 581 aa19.17■□□□□ 0.66
ACTN1-206ENST00000544964 IDI1Q13907 227 aa19.17■□□□□ 0.66
ACTN1-206ENST00000544964 NWD1Q149M9 1564 aa19.15■□□□□ 0.66
ACTN1-206ENST00000544964 E9PCH4 1651 aa19.14■□□□□ 0.66
ACTN1-206ENST00000544964 EID1Q9Y6B2 187 aa19.14■□□□□ 0.65
ACTN1-206ENST00000544964 TMEM131LA2VDJ0 1609 aa19.14■□□□□ 0.65
ACTN1-206ENST00000544964 IQGAP3Q86VI3 1631 aa19.14■□□□□ 0.65
ACTN1-206ENST00000544964 ZFYVE9O95405 1425 aa19.12■□□□□ 0.65
ACTN1-206ENST00000544964 ROCK1Q13464 1354 aa19.12■□□□□ 0.65
ACTN1-206ENST00000544964 STAG3Q9UJ98 1225 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms