RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 NUTM2DQ5VT03 806 aaPredicted RBP17.14■□□□□ 0.33
PCMTD1-208ENST00000544451 CARMIL2Q6F5E8 1435 aa17.14■□□□□ 0.33
PCMTD1-208ENST00000544451 BRPF3Q9ULD4 1205 aa17.13■□□□□ 0.33
PCMTD1-208ENST00000544451 UGGT2Q9NYU1 1516 aa17.13■□□□□ 0.33
PCMTD1-208ENST00000544451 BRD4O60885 1362 aaPredicted RBP17.13■□□□□ 0.33
PCMTD1-208ENST00000544451 MAGI3Q5TCQ9 1506 aa17.13■□□□□ 0.33
PCMTD1-208ENST00000544451 COG6Q9Y2V7 657 aa17.12■□□□□ 0.33
PCMTD1-208ENST00000544451 PLB1Q6P1J6 1458 aa17.11■□□□□ 0.33
PCMTD1-208ENST00000544451 GZF1Q9H116 711 aaPredicted RBP17.11■□□□□ 0.33
PCMTD1-208ENST00000544451 CUL7Q14999 1698 aa17.11■□□□□ 0.33
PCMTD1-208ENST00000544451 HECW1Q76N89 1606 aa17.11■□□□□ 0.33
PCMTD1-208ENST00000544451 HSP90AA1P07900 732 aaKnown RBP17.1■□□□□ 0.33
PCMTD1-208ENST00000544451 CDCA8Q53HL2 280 aa17.09■□□□□ 0.33
PCMTD1-208ENST00000544451 U2SURPO15042 1029 aaKnown RBP17.09■□□□□ 0.33
PCMTD1-208ENST00000544451 NFKBIBQ15653 356 aa17.09■□□□□ 0.33
PCMTD1-208ENST00000544451 DHX29Q7Z478 1369 aaKnown RBP17.09■□□□□ 0.33
PCMTD1-208ENST00000544451 BCAR3O75815 825 aa17.08■□□□□ 0.33
PCMTD1-208ENST00000544451 FTSJ3Q8IY81 847 aaKnown RBP17.07■□□□□ 0.32
PCMTD1-208ENST00000544451 MORC1Q86VD1 984 aa17.06■□□□□ 0.32
PCMTD1-208ENST00000544451 IQGAP2Q13576 1575 aa17.06■□□□□ 0.32
PCMTD1-208ENST00000544451 BECN1Q14457 450 aa17.06■□□□□ 0.32
PCMTD1-208ENST00000544451 FAM161AQ3B820 660 aa17.06■□□□□ 0.32
PCMTD1-208ENST00000544451 PANK1Q8TE04 598 aa17.06■□□□□ 0.32
PCMTD1-208ENST00000544451 GSE1Q14687 1217 aa17.06■□□□□ 0.32
PCMTD1-208ENST00000544451 ROCK1Q13464 1354 aa17.05■□□□□ 0.32
PCMTD1-208ENST00000544451 C9orf84Q5VXU9 1444 aa17.05■□□□□ 0.32
PCMTD1-208ENST00000544451 ZNF608Q9ULD9 1512 aaPredicted RBP17.05■□□□□ 0.32
PCMTD1-208ENST00000544451 CTTNBP2Q8WZ74 1663 aa17.05■□□□□ 0.32
PCMTD1-208ENST00000544451 MS4A1P11836 297 aa17.05■□□□□ 0.32
PCMTD1-208ENST00000544451 TROQ12816 1431 aaPredicted RBP17.05■□□□□ 0.32
PCMTD1-208ENST00000544451 ARID4BQ4LE39 1312 aaPredicted RBP17.05■□□□□ 0.32
PCMTD1-208ENST00000544451 KIF3BO15066 747 aa17.05■□□□□ 0.32
PCMTD1-208ENST00000544451 FRAT2O75474 233 aaPredicted RBP17.05■□□□□ 0.32
PCMTD1-208ENST00000544451 CENPQQ7L2Z9 268 aaPredicted RBP17.05■□□□□ 0.32
PCMTD1-208ENST00000544451 TRAK1Q9UPV9 953 aa17.04■□□□□ 0.32
PCMTD1-208ENST00000544451 CAMSAP2Q08AD1 1489 aa17.04■□□□□ 0.32
PCMTD1-208ENST00000544451 PPP2R1AP30153 589 aa17.03■□□□□ 0.32
PCMTD1-208ENST00000544451 SLC24A1O60721 1099 aa17.01■□□□□ 0.31
PCMTD1-208ENST00000544451 GGT6Q6P531 493 aa17.01■□□□□ 0.31
PCMTD1-208ENST00000544451 STK26Q9P289 416 aa17.01■□□□□ 0.31
PCMTD1-208ENST00000544451 ARHGEF11O15085 1522 aa17.01■□□□□ 0.31
PCMTD1-208ENST00000544451 U2AF1L5P0DN76 240 aaPredicted RBP17.01■□□□□ 0.31
PCMTD1-208ENST00000544451 U2AF1Q01081 240 aaKnown RBP eCLIP17.01■□□□□ 0.31
PCMTD1-208ENST00000544451 CENPJQ9HC77 1338 aaPredicted RBP16.99■□□□□ 0.31
PCMTD1-208ENST00000544451 DENND4BO75064 1496 aaPredicted RBP16.99■□□□□ 0.31
PCMTD1-208ENST00000544451 PTPRGP23470 1445 aa16.99■□□□□ 0.31
PCMTD1-208ENST00000544451 AFAP1Q8N556 730 aa16.99■□□□□ 0.31
PCMTD1-208ENST00000544451 TEX14Q8IWB6 1497 aa16.98■□□□□ 0.31
PCMTD1-208ENST00000544451 USP35Q9P2H5 1018 aa16.98■□□□□ 0.31
PCMTD1-208ENST00000544451 DISP3Q9P2K9 1392 aa16.97■□□□□ 0.31
PCMTD1-208ENST00000544451 MFAP1P55081 439 aaKnown RBP16.97■□□□□ 0.31
PCMTD1-208ENST00000544451 CFAP70Q5T0N1 1121 aa16.97■□□□□ 0.31
PCMTD1-208ENST00000544451 EFCAB2Q5VUJ9 269 aa16.96■□□□□ 0.31
PCMTD1-208ENST00000544451 CFAP53Q96M91 514 aa16.96■□□□□ 0.31
PCMTD1-208ENST00000544451 SPATA31E1Q6ZUB1 1445 aa16.96■□□□□ 0.3
PCMTD1-208ENST00000544451 LAMC3Q9Y6N6 1575 aa16.95■□□□□ 0.3
PCMTD1-208ENST00000544451 NUP153P49790 1475 aaKnown RBP16.95■□□□□ 0.3
PCMTD1-208ENST00000544451 TCOF1Q13428 1488 aaKnown RBP16.95■□□□□ 0.3
PCMTD1-208ENST00000544451 SPAG9O60271 1321 aaKnown RBP16.95■□□□□ 0.3
PCMTD1-208ENST00000544451 STAG3Q9UJ98 1225 aa16.94■□□□□ 0.3
PCMTD1-208ENST00000544451 PZPP20742 1482 aa16.94■□□□□ 0.3
PCMTD1-208ENST00000544451 FOXD4L1Q9NU39 408 aa16.94■□□□□ 0.3
PCMTD1-208ENST00000544451 GPATCH8Q9UKJ3 1502 aaKnown RBP16.93■□□□□ 0.3
PCMTD1-208ENST00000544451 KDM5BQ9UGL1 1544 aa16.92■□□□□ 0.3
PCMTD1-208ENST00000544451 TMEM132EQ6IEE7 984 aa16.92■□□□□ 0.3
PCMTD1-208ENST00000544451 ITPRIPQ8IWB1 547 aa16.92■□□□□ 0.3
PCMTD1-208ENST00000544451 PLPPR3Q6T4P5 718 aa16.91■□□□□ 0.3
PCMTD1-208ENST00000544451 KIAA0586Q9BVV6 1533 aa16.91■□□□□ 0.3
PCMTD1-208ENST00000544451 SRPK2P78362 688 aaKnown RBP16.91■□□□□ 0.3
PCMTD1-208ENST00000544451 TPRNQ4KMQ1 711 aa16.9■□□□□ 0.3
PCMTD1-208ENST00000544451 ERBINQ96RT1 1412 aa16.9■□□□□ 0.3
PCMTD1-208ENST00000544451 MAPK8IP3Q9UPT6 1336 aa16.89■□□□□ 0.29
PCMTD1-208ENST00000544451 E9PSI1 815 aa16.89■□□□□ 0.29
PCMTD1-208ENST00000544451 RSPH4AQ5TD94 716 aa16.89■□□□□ 0.29
PCMTD1-208ENST00000544451 DUSP27Q5VZP5 1158 aa16.89■□□□□ 0.29
PCMTD1-208ENST00000544451 PER1O15534 1290 aaPredicted RBP16.89■□□□□ 0.29
PCMTD1-208ENST00000544451 NAP1L5Q96NT1 182 aaPredicted RBP16.89■□□□□ 0.29
PCMTD1-208ENST00000544451 SMC4Q9NTJ3 1288 aa16.89■□□□□ 0.29
PCMTD1-208ENST00000544451 RNF123Q5XPI4 1314 aa16.88■□□□□ 0.29
PCMTD1-208ENST00000544451 ELL2O00472 640 aaPredicted RBP16.88■□□□□ 0.29
PCMTD1-208ENST00000544451 APBB1O00213 710 aa16.87■□□□□ 0.29
PCMTD1-208ENST00000544451 SAMD9Q5K651 1589 aa16.87■□□□□ 0.29
PCMTD1-208ENST00000544451 SLC12A5Q9H2X9 1139 aa16.87■□□□□ 0.29
PCMTD1-208ENST00000544451 SPINK5Q9NQ38 1064 aaPredicted RBP16.86■□□□□ 0.29
PCMTD1-208ENST00000544451 NCLP19338 710 aaKnown RBP16.86■□□□□ 0.29
PCMTD1-208ENST00000544451 WDR62O43379 1518 aa16.85■□□□□ 0.29
PCMTD1-208ENST00000544451 TESK2Q96S53 571 aa16.85■□□□□ 0.29
PCMTD1-208ENST00000544451 IGHDP01880 384 aa16.84■□□□□ 0.29
PCMTD1-208ENST00000544451 NPM1P06748 294 aaKnown RBP eCLIP16.84■□□□□ 0.29
PCMTD1-208ENST00000544451 TCP11L2Q8N4U5 519 aa16.84■□□□□ 0.29
PCMTD1-208ENST00000544451 MRC2Q9UBG0 1479 aa16.84■□□□□ 0.29
PCMTD1-208ENST00000544451 SLFN5Q08AF3 891 aa16.84■□□□□ 0.29
PCMTD1-208ENST00000544451 RWDD1Q9H446 243 aaPredicted RBP16.84■□□□□ 0.29
PCMTD1-208ENST00000544451 POGKQ9P215 609 aa16.83■□□□□ 0.28
PCMTD1-208ENST00000544451 ARHGAP5Q13017 1502 aa16.83■□□□□ 0.28
PCMTD1-208ENST00000544451 SOX12O15370 315 aa16.83■□□□□ 0.28
PCMTD1-208ENST00000544451 TSR2Q969E8 191 aaKnown RBP16.83■□□□□ 0.28
PCMTD1-208ENST00000544451 MTHFSP49914 203 aa16.82■□□□□ 0.28
PCMTD1-208ENST00000544451 KANK1Q14678 1352 aa16.82■□□□□ 0.28
PCMTD1-208ENST00000544451 PLEKHH1Q9ULM0 1364 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms