RNA–Protein interactions for RNA: ENST00000543997.1

NPIPB5-223, Transcript of nuclear pore complex interacting protein family member B5, human

TSL 4

Gene NPIPB5, Length 573 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB5-223	ENST00000543997	CAMSAP1	Q5T5Y3	1602 aa		8.4	□□□□□ -1.07
NPIPB5-223	ENST00000543997	KDM5C	P41229	1560 aa		8.39	□□□□□ -1.07
NPIPB5-223	ENST00000543997	AGL	P35573	1532 aa		8.39	□□□□□ -1.07
NPIPB5-223	ENST00000543997	NPAT	Q14207	1427 aa		8.39	□□□□□ -1.07
NPIPB5-223	ENST00000543997	PLA2R1	Q13018	1463 aa		8.38	□□□□□ -1.07
NPIPB5-223	ENST00000543997	ZNF518A	Q6AHZ1	1483 aa		8.38	□□□□□ -1.07
NPIPB5-223	ENST00000543997	OTUD5	Q96G74	571 aa		8.38	□□□□□ -1.07
NPIPB5-223	ENST00000543997	TCOF1	Q13428	1488 aa	Known RBP	8.38	□□□□□ -1.07
NPIPB5-223	ENST00000543997	CNTLN	Q9NXG0	1405 aa		8.37	□□□□□ -1.07
NPIPB5-223	ENST00000543997	DIP2C	Q9Y2E4	1556 aa		8.37	□□□□□ -1.07
NPIPB5-223	ENST00000543997	PKD2	Q13563	968 aa		8.37	□□□□□ -1.07
NPIPB5-223	ENST00000543997	NCKAP5L	Q9HCH0	1330 aa		8.35	□□□□□ -1.07
NPIPB5-223	ENST00000543997	MLH3	Q9UHC1	1453 aa		8.35	□□□□□ -1.07
NPIPB5-223	ENST00000543997	EFCAB2	Q5VUJ9	269 aa		8.35	□□□□□ -1.07
NPIPB5-223	ENST00000543997	CSRNP3	Q8WYN3	585 aa		8.35	□□□□□ -1.07
NPIPB5-223	ENST00000543997	SPDYE4	A6NLX3	237 aa		8.34	□□□□□ -1.07
NPIPB5-223	ENST00000543997	ZNF142	P52746	1687 aa	Predicted RBP	8.34	□□□□□ -1.08
NPIPB5-223	ENST00000543997	POTEB2	H3BUK9	544 aa		8.33	□□□□□ -1.08
NPIPB5-223	ENST00000543997	TOM1	O60784	492 aa		8.33	□□□□□ -1.08
NPIPB5-223	ENST00000543997	AFAP1	Q8N556	730 aa		8.33	□□□□□ -1.08
NPIPB5-223	ENST00000543997	MROH2A	A6NES4	1674 aa		8.33	□□□□□ -1.08
NPIPB5-223	ENST00000543997	CPS1	P31327	1500 aa		8.33	□□□□□ -1.08
NPIPB5-223	ENST00000543997	ABCA6	Q8N139	1617 aa		8.32	□□□□□ -1.08
NPIPB5-223	ENST00000543997	PIP4K2B	P78356	416 aa		8.32	□□□□□ -1.08
NPIPB5-223	ENST00000543997	PHF12	Q96QT6	1004 aa		8.32	□□□□□ -1.08
NPIPB5-223	ENST00000543997	ESF1	Q9H501	851 aa	Known RBP	8.32	□□□□□ -1.08
NPIPB5-223	ENST00000543997	ALK	Q9UM73	1620 aa		8.32	□□□□□ -1.08
NPIPB5-223	ENST00000543997	RGS17	Q9UGC6	210 aa	Predicted RBP	8.31	□□□□□ -1.08
NPIPB5-223	ENST00000543997	ZMYM3	Q14202	1370 aa		8.31	□□□□□ -1.08
NPIPB5-223	ENST00000543997	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	8.31	□□□□□ -1.08
NPIPB5-223	ENST00000543997	PTPRK	Q15262	1439 aa		8.3	□□□□□ -1.08
NPIPB5-223	ENST00000543997	CDK13	Q14004	1512 aa	Known RBP	8.3	□□□□□ -1.08
NPIPB5-223	ENST00000543997	MYO3A	Q8NEV4	1616 aa		8.29	□□□□□ -1.08
NPIPB5-223	ENST00000543997	MYO5C	Q9NQX4	1742 aa		8.29	□□□□□ -1.08
NPIPB5-223	ENST00000543997	POTEM	A6NI47	508 aa		8.29	□□□□□ -1.08
NPIPB5-223	ENST00000543997	MNX1	P50219	401 aa	Predicted RBP	8.29	□□□□□ -1.08
NPIPB5-223	ENST00000543997	SHANK2	Q9UPX8	1470 aa		8.29	□□□□□ -1.08
NPIPB5-223	ENST00000543997	SRCAP	Q6ZRS2	3230 aa		8.29	□□□□□ -1.08
NPIPB5-223	ENST00000543997	ASTL	Q6HA08	431 aa	Predicted RBP	8.27	□□□□□ -1.09
NPIPB5-223	ENST00000543997	ARHGAP5	Q13017	1502 aa		8.27	□□□□□ -1.09
NPIPB5-223	ENST00000543997	ABCC1	P33527	1531 aa		8.26	□□□□□ -1.09
NPIPB5-223	ENST00000543997	C7	P10643	843 aa		8.26	□□□□□ -1.09
NPIPB5-223	ENST00000543997	PELP1	Q8IZL8	1130 aa	Known RBP	8.26	□□□□□ -1.09
NPIPB5-223	ENST00000543997	PCDH10	Q9P2E7	1040 aa		8.26	□□□□□ -1.09
NPIPB5-223	ENST00000543997	VWDE	Q8N2E2	1590 aa		8.26	□□□□□ -1.09
NPIPB5-223	ENST00000543997	NEURL4	Q96JN8	1562 aa		8.26	□□□□□ -1.09
NPIPB5-223	ENST00000543997	A2ML1	A8K2U0	1454 aa		8.26	□□□□□ -1.09
NPIPB5-223	ENST00000543997	KIDINS220	Q9ULH0	1771 aa		8.25	□□□□□ -1.09
NPIPB5-223	ENST00000543997	POTEG	Q6S5H5	508 aa		8.25	□□□□□ -1.09
NPIPB5-223	ENST00000543997	SLC39A7	Q92504	469 aa		8.25	□□□□□ -1.09
NPIPB5-223	ENST00000543997	METRN	Q9UJH8	293 aa		8.25	□□□□□ -1.09
NPIPB5-223	ENST00000543997	KIF14	Q15058	1648 aa		8.25	□□□□□ -1.09
NPIPB5-223	ENST00000543997	TRO	Q12816	1431 aa	Predicted RBP	8.24	□□□□□ -1.09
NPIPB5-223	ENST00000543997	MAMSTR	Q6ZN01	415 aa		8.24	□□□□□ -1.09
NPIPB5-223	ENST00000543997	MYT1L	Q9UL68	1186 aa		8.24	□□□□□ -1.09
NPIPB5-223	ENST00000543997	DNMT1	P26358	1616 aa	Known RBP	8.23	□□□□□ -1.09
NPIPB5-223	ENST00000543997	PLXNC1	O60486	1568 aa		8.22	□□□□□ -1.09
NPIPB5-223	ENST00000543997	MED14	O60244	1454 aa		8.22	□□□□□ -1.09
NPIPB5-223	ENST00000543997	ATMIN	O43313	823 aa	Predicted RBP	8.22	□□□□□ -1.09
NPIPB5-223	ENST00000543997	POTEA	Q6S8J7	498 aa		8.22	□□□□□ -1.09
NPIPB5-223	ENST00000543997	MS4A3	Q96HJ5	214 aa		8.22	□□□□□ -1.09
NPIPB5-223	ENST00000543997	CDK11A	Q9UQ88	783 aa	Predicted RBP	8.22	□□□□□ -1.09
NPIPB5-223	ENST00000543997	SUPT6H	Q7KZ85	1726 aa	Known RBP	8.22	□□□□□ -1.09
NPIPB5-223	ENST00000543997	ITSN2	Q9NZM3	1697 aa		8.21	□□□□□ -1.09
NPIPB5-223	ENST00000543997	POLR1A	O95602	1720 aa	Predicted RBP	8.21	□□□□□ -1.09
NPIPB5-223	ENST00000543997	SAMD9L	Q8IVG5	1584 aa		8.21	□□□□□ -1.1
NPIPB5-223	ENST00000543997	RNF17	Q9BXT8	1623 aa	Known RBP	8.21	□□□□□ -1.1
NPIPB5-223	ENST00000543997	CLTC	Q00610	1675 aa	Known RBP	8.21	□□□□□ -1.1
NPIPB5-223	ENST00000543997	CLIP1	P30622	1438 aa		8.2	□□□□□ -1.1
NPIPB5-223	ENST00000543997	CDC42BPB	Q9Y5S2	1711 aa		8.2	□□□□□ -1.1
NPIPB5-223	ENST00000543997	LRRC7	Q96NW7	1537 aa		8.2	□□□□□ -1.1
NPIPB5-223	ENST00000543997	PREX2	Q70Z35	1606 aa		8.2	□□□□□ -1.1
NPIPB5-223	ENST00000543997	SYNM	O15061	1565 aa		8.19	□□□□□ -1.1
NPIPB5-223	ENST00000543997	FMN1	Q68DA7	1419 aa		8.19	□□□□□ -1.1
NPIPB5-223	ENST00000543997	DEPDC5	O75140	1603 aa		8.18	□□□□□ -1.1
NPIPB5-223	ENST00000543997	NPHP4	O75161	1426 aa	Predicted RBP	8.18	□□□□□ -1.1
NPIPB5-223	ENST00000543997	RANGAP1	P46060	587 aa	Predicted RBP	8.17	□□□□□ -1.1
NPIPB5-223	ENST00000543997	ANKLE2	Q86XL3	938 aa		8.17	□□□□□ -1.1
NPIPB5-223	ENST00000543997	TNR	Q92752	1358 aa		8.17	□□□□□ -1.1
NPIPB5-223	ENST00000543997	A2M	P01023	1474 aa		8.17	□□□□□ -1.1
NPIPB5-223	ENST00000543997	SPAG9	O60271	1321 aa	Known RBP	8.16	□□□□□ -1.1
NPIPB5-223	ENST00000543997	POTEJ	P0CG39	1038 aa		8.16	□□□□□ -1.1
NPIPB5-223	ENST00000543997	ATP7A	Q04656	1500 aa		8.16	□□□□□ -1.1
NPIPB5-223	ENST00000543997	FAM135B	Q49AJ0	1406 aa		8.16	□□□□□ -1.1
NPIPB5-223	ENST00000543997	INO80	Q9ULG1	1556 aa	Predicted RBP	8.16	□□□□□ -1.1
NPIPB5-223	ENST00000543997	NLRP1	Q9C000	1473 aa		8.15	□□□□□ -1.1
NPIPB5-223	ENST00000543997	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	8.15	□□□□□ -1.1
NPIPB5-223	ENST00000543997	SCUBE2	Q9NQ36	999 aa		8.15	□□□□□ -1.1
NPIPB5-223	ENST00000543997	STRCP1	A6NGW2	1772 aa		8.15	□□□□□ -1.11
NPIPB5-223	ENST00000543997	SETD1A	O15047	1707 aa	Known RBP	8.15	□□□□□ -1.11
NPIPB5-223	ENST00000543997	FAM135A	Q9P2D6	1515 aa		8.14	□□□□□ -1.11
NPIPB5-223	ENST00000543997	PZP	P20742	1482 aa		8.14	□□□□□ -1.11
NPIPB5-223	ENST00000543997	EEA1	Q15075	1411 aa		8.14	□□□□□ -1.11
NPIPB5-223	ENST00000543997	KIAA1107	Q9UPP5	1409 aa		8.14	□□□□□ -1.11
NPIPB5-223	ENST00000543997	GGT6	Q6P531	493 aa		8.14	□□□□□ -1.11
NPIPB5-223	ENST00000543997	THEMIS	Q8N1K5	641 aa	Predicted RBP	8.14	□□□□□ -1.11
NPIPB5-223	ENST00000543997	UPF1	Q92900	1129 aa	Known RBP eCLIP	8.14	□□□□□ -1.11
NPIPB5-223	ENST00000543997	CCDC61	Q9Y6R9	512 aa		8.14	□□□□□ -1.11
NPIPB5-223	ENST00000543997	SYCP2	Q9BX26	1530 aa		8.13	□□□□□ -1.11
NPIPB5-223	ENST00000543997	TSPYL2	Q9H2G4	693 aa	Predicted RBP	8.13	□□□□□ -1.11

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms