RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 TCOF1Q13428 1488 aaKnown RBP16.74■□□□□ 0.27
TUBGCP2-210ENST00000543663 MYH16Q9H6N6 1097 aa16.74■□□□□ 0.27
TUBGCP2-210ENST00000543663 PTPRKQ15262 1439 aa16.73■□□□□ 0.27
TUBGCP2-210ENST00000543663 GLIPR1L2Q4G1C9 344 aa16.73■□□□□ 0.27
TUBGCP2-210ENST00000543663 KIF7Q2M1P5 1343 aa16.73■□□□□ 0.27
TUBGCP2-210ENST00000543663 C14orf37Q86TY3 774 aa16.72■□□□□ 0.27
TUBGCP2-210ENST00000543663 SOX12O15370 315 aa16.72■□□□□ 0.27
TUBGCP2-210ENST00000543663 DAPK1P53355 1430 aa16.71■□□□□ 0.27
TUBGCP2-210ENST00000543663 CLUAP1Q96AJ1 413 aa16.71■□□□□ 0.27
TUBGCP2-210ENST00000543663 NBPF1Q3BBV0 1214 aa16.71■□□□□ 0.26
TUBGCP2-210ENST00000543663 CCDC146Q8IYE0 955 aa16.7■□□□□ 0.26
TUBGCP2-210ENST00000543663 ERICH6BQ5W0A0 696 aa16.69■□□□□ 0.26
TUBGCP2-210ENST00000543663 SPAG9O60271 1321 aaKnown RBP16.69■□□□□ 0.26
TUBGCP2-210ENST00000543663 USP47Q96K76 1375 aa16.69■□□□□ 0.26
TUBGCP2-210ENST00000543663 KIAA0556O60303 1618 aa16.69■□□□□ 0.26
TUBGCP2-210ENST00000543663 TMF1P82094 1093 aa16.69■□□□□ 0.26
TUBGCP2-210ENST00000543663 CFAP53Q96M91 514 aa16.69■□□□□ 0.26
TUBGCP2-210ENST00000543663 APBB1O00213 710 aa16.68■□□□□ 0.26
TUBGCP2-210ENST00000543663 NUDCQ9Y266 331 aa16.68■□□□□ 0.26
TUBGCP2-210ENST00000543663 IPO9Q96P70 1041 aaKnown RBP16.68■□□□□ 0.26
TUBGCP2-210ENST00000543663 TAOK2Q9UL54 1235 aa16.68■□□□□ 0.26
TUBGCP2-210ENST00000543663 PLCB2Q00722 1185 aa16.67■□□□□ 0.26
TUBGCP2-210ENST00000543663 RAPGEF6Q8TEU7 1601 aa16.67■□□□□ 0.26
TUBGCP2-210ENST00000543663 PLB1Q6P1J6 1458 aa16.67■□□□□ 0.26
TUBGCP2-210ENST00000543663 EXOC6Q8TAG9 804 aa16.66■□□□□ 0.26
TUBGCP2-210ENST00000543663 EIF4G3O43432 1585 aaKnown RBP16.66■□□□□ 0.26
TUBGCP2-210ENST00000543663 KIF15Q9NS87 1388 aa16.66■□□□□ 0.26
TUBGCP2-210ENST00000543663 PANK3Q9H999 370 aa16.66■□□□□ 0.26
TUBGCP2-210ENST00000543663 CDCA8Q53HL2 280 aa16.64■□□□□ 0.25
TUBGCP2-210ENST00000543663 TRAK1Q9UPV9 953 aa16.64■□□□□ 0.25
TUBGCP2-210ENST00000543663 MAPK8IP3Q9UPT6 1336 aa16.63■□□□□ 0.25
TUBGCP2-210ENST00000543663 ANKRD50Q9ULJ7 1429 aa16.63■□□□□ 0.25
TUBGCP2-210ENST00000543663 NUP153P49790 1475 aaKnown RBP16.63■□□□□ 0.25
TUBGCP2-210ENST00000543663 ARID3AQ99856 593 aa16.63■□□□□ 0.25
TUBGCP2-210ENST00000543663 CYB5RLQ6IPT4 315 aa16.63■□□□□ 0.25
TUBGCP2-210ENST00000543663 CCDC7Q96M83 1385 aa16.63■□□□□ 0.25
TUBGCP2-210ENST00000543663 ABCC5O15440 1437 aa16.62■□□□□ 0.25
TUBGCP2-210ENST00000543663 DISP1Q96F81 1524 aa16.62■□□□□ 0.25
TUBGCP2-210ENST00000543663 GOLGA6L22H0YM25 854 aa16.61■□□□□ 0.25
TUBGCP2-210ENST00000543663 PTMAP06454 111 aaKnown RBP16.61■□□□□ 0.25
TUBGCP2-210ENST00000543663 BCL2L13Q9BXK5 485 aa16.61■□□□□ 0.25
TUBGCP2-210ENST00000543663 HSP90AB1P08238 724 aaKnown RBP16.6■□□□□ 0.25
TUBGCP2-210ENST00000543663 DNTTIP2Q5QJE6 756 aaKnown RBP16.6■□□□□ 0.25
TUBGCP2-210ENST00000543663 A0A0G2JS52 829 aa16.6■□□□□ 0.25
TUBGCP2-210ENST00000543663 NUP160Q12769 1436 aa16.6■□□□□ 0.25
TUBGCP2-210ENST00000543663 MORC1Q86VD1 984 aa16.59■□□□□ 0.25
TUBGCP2-210ENST00000543663 POGKQ9P215 609 aa16.59■□□□□ 0.25
TUBGCP2-210ENST00000543663 RRP7AQ9Y3A4 280 aaKnown RBP16.59■□□□□ 0.25
TUBGCP2-210ENST00000543663 ARHGEF11O15085 1522 aa16.59■□□□□ 0.25
TUBGCP2-210ENST00000543663 CCDC144AA2RUR9 1427 aa16.58■□□□□ 0.24
TUBGCP2-210ENST00000543663 TCERG1O14776 1098 aaKnown RBP16.58■□□□□ 0.24
TUBGCP2-210ENST00000543663 CAMSAP2Q08AD1 1489 aa16.58■□□□□ 0.24
TUBGCP2-210ENST00000543663 KTN1Q86UP2 1357 aaKnown RBP16.57■□□□□ 0.24
TUBGCP2-210ENST00000543663 FOXD4L1Q9NU39 408 aa16.57■□□□□ 0.24
TUBGCP2-210ENST00000543663 SRPK2P78362 688 aaKnown RBP16.56■□□□□ 0.24
TUBGCP2-210ENST00000543663 U2AF1L5P0DN76 240 aaPredicted RBP16.56■□□□□ 0.24
TUBGCP2-210ENST00000543663 PDE4AP27815 886 aa16.56■□□□□ 0.24
TUBGCP2-210ENST00000543663 U2AF1Q01081 240 aaKnown RBP eCLIP16.56■□□□□ 0.24
TUBGCP2-210ENST00000543663 ITSN2Q9NZM3 1697 aa16.56■□□□□ 0.24
TUBGCP2-210ENST00000543663 KIF14Q15058 1648 aa16.55■□□□□ 0.24
TUBGCP2-210ENST00000543663 NUTM2FA1L443 756 aa16.55■□□□□ 0.24
TUBGCP2-210ENST00000543663 KIAA1107Q9UPP5 1409 aa16.55■□□□□ 0.24
TUBGCP2-210ENST00000543663 C9orf84Q5VXU9 1444 aa16.54■□□□□ 0.24
TUBGCP2-210ENST00000543663 PLEKHH2Q8IVE3 1493 aa16.54■□□□□ 0.24
TUBGCP2-210ENST00000543663 MAGI3Q5TCQ9 1506 aa16.53■□□□□ 0.24
TUBGCP2-210ENST00000543663 GPATCH8Q9UKJ3 1502 aaKnown RBP16.53■□□□□ 0.24
TUBGCP2-210ENST00000543663 ANKRD30BQ9BXX2 1392 aa16.53■□□□□ 0.24
TUBGCP2-210ENST00000543663 TMEM132EQ6IEE7 984 aa16.53■□□□□ 0.24
TUBGCP2-210ENST00000543663 NCOA1Q15788 1441 aa16.53■□□□□ 0.24
TUBGCP2-210ENST00000543663 MFAP1P55081 439 aaKnown RBP16.53■□□□□ 0.24
TUBGCP2-210ENST00000543663 WASHC2CQ9Y4E1 1318 aa16.52■□□□□ 0.24
TUBGCP2-210ENST00000543663 NLRP13Q86W25 1043 aa16.52■□□□□ 0.24
TUBGCP2-210ENST00000543663 CDCA7LQ96GN5 454 aa16.51■□□□□ 0.23
TUBGCP2-210ENST00000543663 CRBNQ96SW2 442 aa16.51■□□□□ 0.23
TUBGCP2-210ENST00000543663 KANK1Q14678 1352 aa16.5■□□□□ 0.23
TUBGCP2-210ENST00000543663 HSCBQ8IWL3 235 aa16.5■□□□□ 0.23
TUBGCP2-210ENST00000543663 LMOD2Q6P5Q4 547 aa16.5■□□□□ 0.23
TUBGCP2-210ENST00000543663 RALBP1Q15311 655 aa16.49■□□□□ 0.23
TUBGCP2-210ENST00000543663 CFAP70Q5T0N1 1121 aa16.49■□□□□ 0.23
TUBGCP2-210ENST00000543663 GOLGA2Q08379 1002 aa16.49■□□□□ 0.23
TUBGCP2-210ENST00000543663 DNMT1P26358 1616 aaKnown RBP16.49■□□□□ 0.23
TUBGCP2-210ENST00000543663 ITPRIPQ8IWB1 547 aa16.49■□□□□ 0.23
TUBGCP2-210ENST00000543663 RPRD2Q5VT52 1461 aaKnown RBP16.49■□□□□ 0.23
TUBGCP2-210ENST00000543663 PAK3O75914 559 aaPredicted RBP16.49■□□□□ 0.23
TUBGCP2-210ENST00000543663 GCC2Q8IWJ2 1684 aa16.48■□□□□ 0.23
TUBGCP2-210ENST00000543663 CNTLNQ9NXG0 1405 aa16.47■□□□□ 0.23
TUBGCP2-210ENST00000543663 CEP170Q5SW79 1584 aa16.47■□□□□ 0.23
TUBGCP2-210ENST00000543663 ELL2O00472 640 aaPredicted RBP16.46■□□□□ 0.23
TUBGCP2-210ENST00000543663 ATP10BO94823 1461 aa16.46■□□□□ 0.23
TUBGCP2-210ENST00000543663 ZBED9Q6R2W3 1325 aa16.46■□□□□ 0.22
TUBGCP2-210ENST00000543663 RRP1P56182 461 aaKnown RBP16.45■□□□□ 0.22
TUBGCP2-210ENST00000543663 CCDC141Q6ZP82 1450 aa16.45■□□□□ 0.22
TUBGCP2-210ENST00000543663 COG6Q9Y2V7 657 aa16.45■□□□□ 0.22
TUBGCP2-210ENST00000543663 ARHGAP5Q13017 1502 aa16.44■□□□□ 0.22
TUBGCP2-210ENST00000543663 MYBBP1AQ9BQG0 1328 aaKnown RBP16.43■□□□□ 0.22
TUBGCP2-210ENST00000543663 RAPGEF3O95398 923 aa16.43■□□□□ 0.22
TUBGCP2-210ENST00000543663 APAF1O14727 1248 aa16.43■□□□□ 0.22
TUBGCP2-210ENST00000543663 SHANK2Q9UPX8 1470 aa16.43■□□□□ 0.22
TUBGCP2-210ENST00000543663 FANCIQ9NVI1 1328 aa16.42■□□□□ 0.22
TUBGCP2-210ENST00000543663 ADGRL2O95490 1459 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms