RNA–Protein interactions for RNA: ENST00000543486.1

AP003170.4-201, humanhuman

TSL 3 BASIC

Gene AP003170.4, Length 586 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003170.4-201ENST00000543486 RABGEF1Q9UJ41 708 aa13.62□□□□□ -0.23
AP003170.4-201ENST00000543486 RBM33Q96EV2 1170 aaKnown RBP13.61□□□□□ -0.23
AP003170.4-201ENST00000543486 BBXQ8WY36 941 aaPredicted RBP13.6□□□□□ -0.23
AP003170.4-201ENST00000543486 DDX12PQ92771 950 aa13.6□□□□□ -0.23
AP003170.4-201ENST00000543486 KIAA1468Q9P260 1216 aa13.6□□□□□ -0.23
AP003170.4-201ENST00000543486 C6orf132Q5T0Z8 1188 aa13.59□□□□□ -0.23
AP003170.4-201ENST00000543486 BCAMP50895 628 aa13.58□□□□□ -0.24
AP003170.4-201ENST00000543486 ANKK1Q8NFD2 765 aa13.57□□□□□ -0.24
AP003170.4-201ENST00000543486 EPAS1Q99814 870 aa13.57□□□□□ -0.24
AP003170.4-201ENST00000543486 SEPT9Q9UHD8 586 aaPredicted RBP13.55□□□□□ -0.24
AP003170.4-201ENST00000543486 IFFO2Q5TF58 517 aa13.52□□□□□ -0.25
AP003170.4-201ENST00000543486 ZFRQ96KR1 1074 aaKnown RBP13.51□□□□□ -0.25
AP003170.4-201ENST00000543486 A0A0G2JS52 829 aa13.5□□□□□ -0.25
AP003170.4-201ENST00000543486 LAPTM4BQ86VI4 370 aa13.5□□□□□ -0.25
AP003170.4-201ENST00000543486 SOWAHBA6NEL2 793 aa13.49□□□□□ -0.25
AP003170.4-201ENST00000543486 TRIM6-TRIM34B2RNG4 842 aa13.49□□□□□ -0.25
AP003170.4-201ENST00000543486 NBR1Q14596 966 aa13.48□□□□□ -0.25
AP003170.4-201ENST00000543486 SPRYD3Q8NCJ5 442 aa13.48□□□□□ -0.25
AP003170.4-201ENST00000543486 ONECUT3O60422 494 aaPredicted RBP13.47□□□□□ -0.25
AP003170.4-201ENST00000543486 TSR1Q2NL82 804 aaKnown RBP13.47□□□□□ -0.25
AP003170.4-201ENST00000543486 WBP1LQ9NX94 342 aa13.47□□□□□ -0.25
AP003170.4-201ENST00000543486 MAP3K7O43318 606 aa13.45□□□□□ -0.26
AP003170.4-201ENST00000543486 EN1Q05925 392 aaPredicted RBP13.43□□□□□ -0.26
AP003170.4-201ENST00000543486 PDIA6Q15084 440 aa13.43□□□□□ -0.26
AP003170.4-201ENST00000543486 FAM98CQ17RN3 349 aaKnown RBP13.42□□□□□ -0.26
AP003170.4-201ENST00000543486 TSKSQ9UJT2 592 aa13.42□□□□□ -0.26
AP003170.4-201ENST00000543486 RGS20O76081 388 aa13.41□□□□□ -0.26
AP003170.4-201ENST00000543486 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.41□□□□□ -0.26
AP003170.4-201ENST00000543486 ITGBL1O95965 494 aaPredicted RBP13.4□□□□□ -0.26
AP003170.4-201ENST00000543486 CFAP44Q96MT7 982 aa13.4□□□□□ -0.26
AP003170.4-201ENST00000543486 PRIM1P49642 420 aaKnown RBP13.39□□□□□ -0.27
AP003170.4-201ENST00000543486 PAXIP1Q6ZW49 1069 aaPredicted RBP13.39□□□□□ -0.27
AP003170.4-201ENST00000543486 E2F4Q16254 413 aa13.38□□□□□ -0.27
AP003170.4-201ENST00000543486 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.38□□□□□ -0.27
AP003170.4-201ENST00000543486 HPS5Q9UPZ3 1129 aa13.38□□□□□ -0.27
AP003170.4-201ENST00000543486 GRXCR2A6NFK2 248 aa13.37□□□□□ -0.27
AP003170.4-201ENST00000543486 SPDYE16A6NNV3 312 aaPredicted RBP13.37□□□□□ -0.27
AP003170.4-201ENST00000543486 PACS2Q86VP3 889 aa13.37□□□□□ -0.27
AP003170.4-201ENST00000543486 LRCH3Q96II8 777 aa13.37□□□□□ -0.27
AP003170.4-201ENST00000543486 IRX2Q9BZI1 471 aaPredicted RBP13.37□□□□□ -0.27
AP003170.4-201ENST00000543486 SMAPO00193 183 aa13.36□□□□□ -0.27
AP003170.4-201ENST00000543486 TSR3Q9UJK0 312 aaKnown RBP13.35□□□□□ -0.27
AP003170.4-201ENST00000543486 NYAP1Q6ZVC0 841 aa13.34□□□□□ -0.27
AP003170.4-201ENST00000543486 FAM198AQ9UFP1 575 aa13.34□□□□□ -0.27
AP003170.4-201ENST00000543486 CDCA7LQ96GN5 454 aa13.33□□□□□ -0.28
AP003170.4-201ENST00000543486 WDR70Q9NW82 654 aa13.33□□□□□ -0.28
AP003170.4-201ENST00000543486 KCNC4Q03721 635 aa13.32□□□□□ -0.28
AP003170.4-201ENST00000543486 RTN4Q9NQC3 1192 aaKnown RBP13.32□□□□□ -0.28
AP003170.4-201ENST00000543486 C3orf80F5H4A9 247 aa13.31□□□□□ -0.28
AP003170.4-201ENST00000543486 PRSS12P56730 875 aa13.3□□□□□ -0.28
AP003170.4-201ENST00000543486 AMER1Q5JTC6 1135 aaPredicted RBP13.29□□□□□ -0.28
AP003170.4-201ENST00000543486 SAMD7Q7Z3H4 446 aa13.28□□□□□ -0.28
AP003170.4-201ENST00000543486 PPP4CP60510 307 aa13.27□□□□□ -0.29
AP003170.4-201ENST00000543486 CDHR5Q9HBB8 845 aa13.27□□□□□ -0.29
AP003170.4-201ENST00000543486 OSBPP22059 807 aa13.26□□□□□ -0.29
AP003170.4-201ENST00000543486 PNMA3Q9UL41 463 aa13.25□□□□□ -0.29
AP003170.4-201ENST00000543486 ARIH1Q9Y4X5 557 aaPredicted RBP13.25□□□□□ -0.29
AP003170.4-201ENST00000543486 TATDN2Q93075 761 aa13.24□□□□□ -0.29
AP003170.4-201ENST00000543486 CERKQ8TCT0 537 aa13.22□□□□□ -0.29
AP003170.4-201ENST00000543486 NBPF26B4DH59 902 aa13.2□□□□□ -0.3
AP003170.4-201ENST00000543486 NUDT18Q6ZVK8 323 aa13.2□□□□□ -0.3
AP003170.4-201ENST00000543486 RNF40O75150 1001 aa13.18□□□□□ -0.3
AP003170.4-201ENST00000543486 TJAP1Q5JTD0 557 aa13.17□□□□□ -0.3
AP003170.4-201ENST00000543486 MTRQ99707 1265 aa13.13□□□□□ -0.31
AP003170.4-201ENST00000543486 NPDC1Q9NQX5 325 aaPredicted RBP13.13□□□□□ -0.31
AP003170.4-201ENST00000543486 PADI6Q6TGC4 694 aa13.12□□□□□ -0.31
AP003170.4-201ENST00000543486 Q6ZNB5 142 aa13.12□□□□□ -0.31
AP003170.4-201ENST00000543486 ZNF516Q92618 1163 aa13.11□□□□□ -0.31
AP003170.4-201ENST00000543486 APLP1P51693 650 aa13.1□□□□□ -0.31
AP003170.4-201ENST00000543486 HDGFP51858 240 aaKnown RBP13.1□□□□□ -0.31
AP003170.4-201ENST00000543486 IL21Q9HBE4 155 aa13.09□□□□□ -0.31
AP003170.4-201ENST00000543486 TTC13Q8NBP0 860 aa13.08□□□□□ -0.32
AP003170.4-201ENST00000543486 TSHZ2Q9NRE2 1034 aa13.08□□□□□ -0.32
AP003170.4-201ENST00000543486 RBM27Q9P2N5 1060 aaKnown RBP13.08□□□□□ -0.32
AP003170.4-201ENST00000543486 MLLT3P42568 568 aaPredicted RBP13.07□□□□□ -0.32
AP003170.4-201ENST00000543486 SWT1Q5T5J6 900 aaKnown RBP13.07□□□□□ -0.32
AP003170.4-201ENST00000543486 PPP1R18Q6NYC8 613 aa13.05□□□□□ -0.32
AP003170.4-201ENST00000543486 NKX2-3Q8TAU0 364 aa13.04□□□□□ -0.32
AP003170.4-201ENST00000543486 PRKD2Q9BZL6 878 aa13.04□□□□□ -0.32
AP003170.4-201ENST00000543486 COPS2P61201 443 aa13.02□□□□□ -0.33
AP003170.4-201ENST00000543486 GFRA3O60609 400 aa13.01□□□□□ -0.33
AP003170.4-201ENST00000543486 EYA1Q99502 592 aa13□□□□□ -0.33
AP003170.4-201ENST00000543486 SLF2Q8IX21 1173 aa12.99□□□□□ -0.33
AP003170.4-201ENST00000543486 KCNV2Q8TDN2 545 aa12.99□□□□□ -0.33
AP003170.4-201ENST00000543486 ARHGEF1Q92888 912 aaKnown RBP12.98□□□□□ -0.33
AP003170.4-201ENST00000543486 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.98□□□□□ -0.33
AP003170.4-201ENST00000543486 LCE2BO14633 110 aa12.95□□□□□ -0.34
AP003170.4-201ENST00000543486 LAPTM4AQ15012 233 aa12.94□□□□□ -0.34
AP003170.4-201ENST00000543486 PTGDRQ13258 359 aa12.92□□□□□ -0.34
AP003170.4-201ENST00000543486 FAM161AQ3B820 660 aa12.92□□□□□ -0.34
AP003170.4-201ENST00000543486 NECTIN2Q92692 538 aa12.92□□□□□ -0.34
AP003170.4-201ENST00000543486 SLC4A3P48751 1232 aa12.9□□□□□ -0.34
AP003170.4-201ENST00000543486 V9GY48 417 aaPredicted RBP12.9□□□□□ -0.34
AP003170.4-201ENST00000543486 NUTM2FA1L443 756 aa12.89□□□□□ -0.35
AP003170.4-201ENST00000543486 TRAF7Q6Q0C0 670 aa12.89□□□□□ -0.35
AP003170.4-201ENST00000543486 ZPR1O75312 459 aa12.88□□□□□ -0.35
AP003170.4-201ENST00000543486 PCDHB3Q9Y5E6 796 aa12.88□□□□□ -0.35
AP003170.4-201ENST00000543486 BLOC1S3Q6QNY0 202 aa12.87□□□□□ -0.35
AP003170.4-201ENST00000543486 ADGRG1Q9Y653 693 aa12.87□□□□□ -0.35
AP003170.4-201ENST00000543486 NRG2O14511 850 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms