RNA–Protein interactions for RNA: ENST00000543415.5

GTF2H3-213, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-213ENST00000543415 GOLGA8CPA6NN73 597 aa8.37□□□□□ -1.07
GTF2H3-213ENST00000543415 NBPF3Q9H094 633 aa8.37□□□□□ -1.07
GTF2H3-213ENST00000543415 TSHZ2Q9NRE2 1034 aa8.37□□□□□ -1.07
GTF2H3-213ENST00000543415 PPP1R3GB7ZBB8 358 aa8.36□□□□□ -1.07
GTF2H3-213ENST00000543415 MRPL50Q8N5N7 158 aaKnown RBP8.36□□□□□ -1.07
GTF2H3-213ENST00000543415 EPAS1Q99814 870 aa8.36□□□□□ -1.07
GTF2H3-213ENST00000543415 DPYSL4O14531 572 aa8.35□□□□□ -1.07
GTF2H3-213ENST00000543415 RABGEF1Q9UJ41 708 aa8.33□□□□□ -1.08
GTF2H3-213ENST00000543415 THSD4Q6ZMP0 1018 aa8.32□□□□□ -1.08
GTF2H3-213ENST00000543415 PTPN5P54829 565 aa8.31□□□□□ -1.08
GTF2H3-213ENST00000543415 WNT2BQ93097 391 aa8.31□□□□□ -1.08
GTF2H3-213ENST00000543415 ONECUT3O60422 494 aaPredicted RBP8.3□□□□□ -1.08
GTF2H3-213ENST00000543415 SPDYE16A6NNV3 312 aaPredicted RBP8.29□□□□□ -1.08
GTF2H3-213ENST00000543415 COL9A1P20849 921 aa8.29□□□□□ -1.08
GTF2H3-213ENST00000543415 C6orf132Q5T0Z8 1188 aa8.29□□□□□ -1.08
GTF2H3-213ENST00000543415 PDIA6Q15084 440 aa8.28□□□□□ -1.08
GTF2H3-213ENST00000543415 PROX2Q3B8N5 592 aa8.28□□□□□ -1.08
GTF2H3-213ENST00000543415 LAPTM4BQ86VI4 370 aa8.28□□□□□ -1.08
GTF2H3-213ENST00000543415 WDR70Q9NW82 654 aa8.28□□□□□ -1.08
GTF2H3-213ENST00000543415 E2F4Q16254 413 aa8.27□□□□□ -1.09
GTF2H3-213ENST00000543415 ANKK1Q8NFD2 765 aa8.27□□□□□ -1.09
GTF2H3-213ENST00000543415 DDX12PQ92771 950 aa8.27□□□□□ -1.09
GTF2H3-213ENST00000543415 IFFO2Q5TF58 517 aa8.25□□□□□ -1.09
GTF2H3-213ENST00000543415 KIAA1468Q9P260 1216 aa8.25□□□□□ -1.09
GTF2H3-213ENST00000543415 ARIH1Q9Y4X5 557 aaPredicted RBP8.25□□□□□ -1.09
GTF2H3-213ENST00000543415 RBM33Q96EV2 1170 aaKnown RBP8.24□□□□□ -1.09
GTF2H3-213ENST00000543415 TRIM6-TRIM34B2RNG4 842 aa8.23□□□□□ -1.09
GTF2H3-213ENST00000543415 EN1Q05925 392 aaPredicted RBP8.23□□□□□ -1.09
GTF2H3-213ENST00000543415 NBR1Q14596 966 aa8.23□□□□□ -1.09
GTF2H3-213ENST00000543415 MAP3K7O43318 606 aa8.22□□□□□ -1.09
GTF2H3-213ENST00000543415 VSIG10Q8N0Z9 540 aa8.22□□□□□ -1.09
GTF2H3-213ENST00000543415 NYAP1Q6ZVC0 841 aa8.21□□□□□ -1.1
GTF2H3-213ENST00000543415 ZFRQ96KR1 1074 aaKnown RBP8.21□□□□□ -1.1
GTF2H3-213ENST00000543415 SOWAHBA6NEL2 793 aa8.2□□□□□ -1.1
GTF2H3-213ENST00000543415 FAM98CQ17RN3 349 aaKnown RBP8.2□□□□□ -1.1
GTF2H3-213ENST00000543415 PACS2Q86VP3 889 aa8.19□□□□□ -1.1
GTF2H3-213ENST00000543415 CERKQ8TCT0 537 aa8.19□□□□□ -1.1
GTF2H3-213ENST00000543415 RGS20O76081 388 aa8.18□□□□□ -1.1
GTF2H3-213ENST00000543415 SEPT9Q9UHD8 586 aaPredicted RBP8.18□□□□□ -1.1
GTF2H3-213ENST00000543415 BCAMP50895 628 aa8.17□□□□□ -1.1
GTF2H3-213ENST00000543415 TSR1Q2NL82 804 aaKnown RBP8.17□□□□□ -1.1
GTF2H3-213ENST00000543415 KCNV2Q8TDN2 545 aa8.17□□□□□ -1.1
GTF2H3-213ENST00000543415 BCANQ96GW7 911 aa8.17□□□□□ -1.1
GTF2H3-213ENST00000543415 GRXCR2A6NFK2 248 aa8.16□□□□□ -1.1
GTF2H3-213ENST00000543415 KDM2AQ9Y2K7 1162 aa8.16□□□□□ -1.1
GTF2H3-213ENST00000543415 LRCH3Q96II8 777 aa8.15□□□□□ -1.1
GTF2H3-213ENST00000543415 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.15□□□□□ -1.1
GTF2H3-213ENST00000543415 A0A0G2JS52 829 aa8.14□□□□□ -1.11
GTF2H3-213ENST00000543415 ITGBL1O95965 494 aaPredicted RBP8.14□□□□□ -1.11
GTF2H3-213ENST00000543415 PRSS12P56730 875 aa8.14□□□□□ -1.11
GTF2H3-213ENST00000543415 CDCA7LQ96GN5 454 aa8.14□□□□□ -1.11
GTF2H3-213ENST00000543415 TSKSQ9UJT2 592 aa8.14□□□□□ -1.11
GTF2H3-213ENST00000543415 TSR3Q9UJK0 312 aaKnown RBP8.13□□□□□ -1.11
GTF2H3-213ENST00000543415 WBP1LQ9NX94 342 aa8.12□□□□□ -1.11
GTF2H3-213ENST00000543415 NBPF26B4DH59 902 aa8.11□□□□□ -1.11
GTF2H3-213ENST00000543415 OSBPP22059 807 aa8.11□□□□□ -1.11
GTF2H3-213ENST00000543415 RBM27Q9P2N5 1060 aaKnown RBP8.11□□□□□ -1.11
GTF2H3-213ENST00000543415 HPS5Q9UPZ3 1129 aa8.11□□□□□ -1.11
GTF2H3-213ENST00000543415 PRIM1P49642 420 aaKnown RBP8.09□□□□□ -1.11
GTF2H3-213ENST00000543415 KCNC4Q03721 635 aa8.09□□□□□ -1.11
GTF2H3-213ENST00000543415 ARHGEF1Q92888 912 aaKnown RBP8.09□□□□□ -1.11
GTF2H3-213ENST00000543415 PPP4CP60510 307 aa8.08□□□□□ -1.12
GTF2H3-213ENST00000543415 TATDN2Q93075 761 aa8.08□□□□□ -1.12
GTF2H3-213ENST00000543415 HDGFP51858 240 aaKnown RBP8.07□□□□□ -1.12
GTF2H3-213ENST00000543415 FAM198AQ9UFP1 575 aa8.07□□□□□ -1.12
GTF2H3-213ENST00000543415 PNMA3Q9UL41 463 aa8.07□□□□□ -1.12
GTF2H3-213ENST00000543415 SMAPO00193 183 aa8.06□□□□□ -1.12
GTF2H3-213ENST00000543415 SAMD7Q7Z3H4 446 aa8.05□□□□□ -1.12
GTF2H3-213ENST00000543415 P3H3Q8IVL6 736 aa8.05□□□□□ -1.12
GTF2H3-213ENST00000543415 CDHR5Q9HBB8 845 aa8.05□□□□□ -1.12
GTF2H3-213ENST00000543415 MLLT3P42568 568 aaPredicted RBP8.04□□□□□ -1.12
GTF2H3-213ENST00000543415 NUDT18Q6ZVK8 323 aa8.03□□□□□ -1.12
GTF2H3-213ENST00000543415 NECTIN2Q92692 538 aa8.03□□□□□ -1.12
GTF2H3-213ENST00000543415 TTC13Q8NBP0 860 aa8.02□□□□□ -1.13
GTF2H3-213ENST00000543415 IRX2Q9BZI1 471 aaPredicted RBP8.02□□□□□ -1.13
GTF2H3-213ENST00000543415 NPDC1Q9NQX5 325 aaPredicted RBP8.02□□□□□ -1.13
GTF2H3-213ENST00000543415 SEMA3EO15041 775 aa8.01□□□□□ -1.13
GTF2H3-213ENST00000543415 C3orf80F5H4A9 247 aa8□□□□□ -1.13
GTF2H3-213ENST00000543415 SLC4A3P48751 1232 aa8□□□□□ -1.13
GTF2H3-213ENST00000543415 PADI6Q6TGC4 694 aa8□□□□□ -1.13
GTF2H3-213ENST00000543415 PRKCSHP14314 528 aaPredicted RBP7.99□□□□□ -1.13
GTF2H3-213ENST00000543415 RNF40O75150 1001 aa7.98□□□□□ -1.13
GTF2H3-213ENST00000543415 TJAP1Q5JTD0 557 aa7.98□□□□□ -1.13
GTF2H3-213ENST00000543415 SLF2Q8IX21 1173 aa7.98□□□□□ -1.13
GTF2H3-213ENST00000543415 IL21Q9HBE4 155 aa7.97□□□□□ -1.13
GTF2H3-213ENST00000543415 SWT1Q5T5J6 900 aaKnown RBP7.95□□□□□ -1.14
GTF2H3-213ENST00000543415 EYA1Q99502 592 aa7.95□□□□□ -1.14
GTF2H3-213ENST00000543415 MTRQ99707 1265 aa7.95□□□□□ -1.14
GTF2H3-213ENST00000543415 TESPA1A2RU30 521 aaPredicted RBP7.94□□□□□ -1.14
GTF2H3-213ENST00000543415 PTGDRQ13258 359 aa7.94□□□□□ -1.14
GTF2H3-213ENST00000543415 TPRNQ4KMQ1 711 aa7.94□□□□□ -1.14
GTF2H3-213ENST00000543415 APLP1P51693 650 aa7.93□□□□□ -1.14
GTF2H3-213ENST00000543415 PRR14Q9BWN1 585 aa7.93□□□□□ -1.14
GTF2H3-213ENST00000543415 NUTM2FA1L443 756 aa7.92□□□□□ -1.14
GTF2H3-213ENST00000543415 RBM46Q8TBY0 533 aaKnown RBP7.92□□□□□ -1.14
GTF2H3-213ENST00000543415 DNAJB2P25686 324 aa7.91□□□□□ -1.14
GTF2H3-213ENST00000543415 FCHSD2O94868 740 aa7.89□□□□□ -1.15
GTF2H3-213ENST00000543415 LAPTM4AQ15012 233 aa7.89□□□□□ -1.15
GTF2H3-213ENST00000543415 GGCXP38435 758 aa7.88□□□□□ -1.15
GTF2H3-213ENST00000543415 RBM26Q5T8P6 1007 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms