RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ZNF316A6NFI3 1004 aaPredicted RBP13.47□□□□□ -0.25
GNE-206ENST00000543356 KIF13AQ9H1H9 1805 aa13.46□□□□□ -0.26
GNE-206ENST00000543356 FOXD1Q16676 465 aa13.45□□□□□ -0.26
GNE-206ENST00000543356 PKD2Q13563 968 aa13.45□□□□□ -0.26
GNE-206ENST00000543356 BCORL1Q5H9F3 1711 aa13.45□□□□□ -0.26
GNE-206ENST00000543356 TEX14Q8IWB6 1497 aa13.44□□□□□ -0.26
GNE-206ENST00000543356 PPP1R15AO75807 674 aaPredicted RBP13.44□□□□□ -0.26
GNE-206ENST00000543356 DHX29Q7Z478 1369 aaKnown RBP13.44□□□□□ -0.26
GNE-206ENST00000543356 ABCA6Q8N139 1617 aa13.44□□□□□ -0.26
GNE-206ENST00000543356 PRDM15P57071 1507 aaPredicted RBP13.44□□□□□ -0.26
GNE-206ENST00000543356 VWDEQ8N2E2 1590 aa13.44□□□□□ -0.26
GNE-206ENST00000543356 FRMPD1Q5SYB0 1578 aa13.43□□□□□ -0.26
GNE-206ENST00000543356 FAM69CQ0P6D2 419 aa13.43□□□□□ -0.26
GNE-206ENST00000543356 RNF17Q9BXT8 1623 aaKnown RBP13.43□□□□□ -0.26
GNE-206ENST00000543356 MROH1Q8NDA8 1641 aa13.42□□□□□ -0.26
GNE-206ENST00000543356 ZMYM4Q5VZL5 1548 aa13.42□□□□□ -0.26
GNE-206ENST00000543356 A2MP01023 1474 aa13.42□□□□□ -0.26
GNE-206ENST00000543356 TET3O43151 1660 aa13.41□□□□□ -0.26
GNE-206ENST00000543356 TSPOAP1O95153 1857 aa13.4□□□□□ -0.26
GNE-206ENST00000543356 DIP2CQ9Y2E4 1556 aa13.4□□□□□ -0.26
GNE-206ENST00000543356 ATP10AO60312 1499 aa13.39□□□□□ -0.27
GNE-206ENST00000543356 E9PCH4 1651 aa13.38□□□□□ -0.27
GNE-206ENST00000543356 MYT1LQ9UL68 1186 aa13.38□□□□□ -0.27
GNE-206ENST00000543356 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.37□□□□□ -0.272e-6■□□□□ 8.5
GNE-206ENST00000543356 LMTK2Q8IWU2 1503 aa13.37□□□□□ -0.27
GNE-206ENST00000543356 KANK1Q14678 1352 aa13.37□□□□□ -0.27
GNE-206ENST00000543356 L3MBTL2Q969R5 705 aa13.35□□□□□ -0.27
GNE-206ENST00000543356 PLA2R1Q13018 1463 aa13.35□□□□□ -0.27
GNE-206ENST00000543356 RAPGEF3O95398 923 aa13.35□□□□□ -0.27
GNE-206ENST00000543356 SPHKAPQ2M3C7 1700 aa13.35□□□□□ -0.27
GNE-206ENST00000543356 TRPM2O94759 1503 aa13.34□□□□□ -0.27
GNE-206ENST00000543356 EFCAB6Q5THR3 1501 aa13.34□□□□□ -0.27
GNE-206ENST00000543356 REREQ9P2R6 1566 aa13.34□□□□□ -0.27
GNE-206ENST00000543356 CCDC144AA2RUR9 1427 aa13.34□□□□□ -0.27
GNE-206ENST00000543356 KIF3BO15066 747 aa13.33□□□□□ -0.27
GNE-206ENST00000543356 CEP152O94986 1710 aa13.33□□□□□ -0.28
GNE-206ENST00000543356 PTPRTO14522 1441 aa13.32□□□□□ -0.28
GNE-206ENST00000543356 DIEXFQ68CQ4 756 aaKnown RBP13.31□□□□□ -0.28
GNE-206ENST00000543356 YEATS2Q9ULM3 1422 aa13.31□□□□□ -0.28
GNE-206ENST00000543356 ZC3H13Q5T200 1668 aaKnown RBP13.31□□□□□ -0.28
GNE-206ENST00000543356 UHRF1BP1Q6BDS2 1440 aa13.3□□□□□ -0.28
GNE-206ENST00000543356 ABCC3O15438 1527 aa13.28□□□□□ -0.28
GNE-206ENST00000543356 NEURL4Q96JN8 1562 aa13.28□□□□□ -0.28
GNE-206ENST00000543356 ARHGEF40Q8TER5 1519 aa13.28□□□□□ -0.28
GNE-206ENST00000543356 CLTCL1P53675 1640 aa13.28□□□□□ -0.28
GNE-206ENST00000543356 CAMSAP1Q5T5Y3 1602 aa13.28□□□□□ -0.28
GNE-206ENST00000543356 AGLP35573 1532 aa13.27□□□□□ -0.29
GNE-206ENST00000543356 NBPF8Q3BBV2 869 aa13.26□□□□□ -0.29
GNE-206ENST00000543356 RALGAPBQ86X10 1494 aa13.25□□□□□ -0.29
GNE-206ENST00000543356 COL17A1Q9UMD9 1497 aaPredicted RBP13.25□□□□□ -0.29
GNE-206ENST00000543356 SPATA31E1Q6ZUB1 1445 aa13.24□□□□□ -0.29
GNE-206ENST00000543356 TRPM1Q7Z4N2 1603 aa13.22□□□□□ -0.29
GNE-206ENST00000543356 NPATQ14207 1427 aa13.22□□□□□ -0.29
GNE-206ENST00000543356 ARHGAP31Q2M1Z3 1444 aa13.22□□□□□ -0.29
GNE-206ENST00000543356 PRKCSHP14314 528 aaPredicted RBP13.21□□□□□ -0.29
GNE-206ENST00000543356 SIGLEC1Q9BZZ2 1709 aa13.21□□□□□ -0.3
GNE-206ENST00000543356 KIF1BO60333 1816 aa13.21□□□□□ -0.3
GNE-206ENST00000543356 PRAG1Q86YV5 1406 aa13.21□□□□□ -0.3
GNE-206ENST00000543356 CNTLNQ9NXG0 1405 aa13.21□□□□□ -0.3
GNE-206ENST00000543356 GGT6Q6P531 493 aa13.21□□□□□ -0.3
GNE-206ENST00000543356 LAMC1P11047 1609 aa13.2□□□□□ -0.3
GNE-206ENST00000543356 WASHC2CQ9Y4E1 1318 aa13.19□□□□□ -0.3
GNE-206ENST00000543356 EIF4G2P78344 907 aaKnown RBP eCLIP13.19□□□□□ -0.3
GNE-206ENST00000543356 POLR1AO95602 1720 aaPredicted RBP13.19□□□□□ -0.3
GNE-206ENST00000543356 DCAF11Q8TEB1 546 aa13.19□□□□□ -0.3
GNE-206ENST00000543356 UGGT1Q9NYU2 1555 aa13.18□□□□□ -0.3
GNE-206ENST00000543356 PIK3C2BO00750 1634 aa13.18□□□□□ -0.3
GNE-206ENST00000543356 IFT172Q9UG01 1749 aa13.18□□□□□ -0.3
GNE-206ENST00000543356 MADDQ8WXG6 1647 aa13.18□□□□□ -0.3
GNE-206ENST00000543356 ADGRB3O60242 1522 aa13.18□□□□□ -0.3
GNE-206ENST00000543356 HSPA5P11021 654 aaKnown RBP13.18□□□□□ -0.3
GNE-206ENST00000543356 NOS1P29475 1434 aa13.18□□□□□ -0.3
GNE-206ENST00000543356 MROH2AA6NES4 1674 aa13.17□□□□□ -0.3
GNE-206ENST00000543356 SYNMO15061 1565 aa13.16□□□□□ -0.3
GNE-206ENST00000543356 DNAJC5Q9H3Z4 198 aa13.16□□□□□ -0.3
GNE-206ENST00000543356 PPP6R1Q9UPN7 881 aa13.16□□□□□ -0.3
GNE-206ENST00000543356 PREX1Q8TCU6 1659 aa13.16□□□□□ -0.3
GNE-206ENST00000543356 STAC3Q96MF2 364 aa13.16□□□□□ -0.3
GNE-206ENST00000543356 ZNF326Q5BKZ1 582 aaKnown RBP13.15□□□□□ -0.3
GNE-206ENST00000543356 RGL3Q3MIN7 710 aa13.15□□□□□ -0.3
GNE-206ENST00000543356 MYOM2P54296 1465 aa13.14□□□□□ -0.31
GNE-206ENST00000543356 HIRIP3Q9BW71 556 aaPredicted RBP13.14□□□□□ -0.31
GNE-206ENST00000543356 KDM2AQ9Y2K7 1162 aa13.14□□□□□ -0.31
GNE-206ENST00000543356 GPRASP1Q5JY77 1395 aa13.14□□□□□ -0.31
GNE-206ENST00000543356 CLTCQ00610 1675 aaKnown RBP13.14□□□□□ -0.31
GNE-206ENST00000543356 USP47Q96K76 1375 aa13.14□□□□□ -0.31
GNE-206ENST00000543356 KIAA1210Q9ULL0 1709 aa13.13□□□□□ -0.31
GNE-206ENST00000543356 BCL11AQ9H165 835 aa13.13□□□□□ -0.31
GNE-206ENST00000543356 ROCK2O75116 1388 aaKnown RBP13.11□□□□□ -0.31
GNE-206ENST00000543356 PPLO60437 1756 aa13.11□□□□□ -0.31
GNE-206ENST00000543356 CFAP65Q6ZU64 1925 aaKnown RBP13.1□□□□□ -0.31
GNE-206ENST00000543356 NRXN1Q9ULB1 1477 aa13.1□□□□□ -0.31
GNE-206ENST00000543356 CARD11Q9BXL7 1154 aa13.1□□□□□ -0.31
GNE-206ENST00000543356 ERVK-7P63135 1459 aa13.09□□□□□ -0.31
GNE-206ENST00000543356 MIER1Q8N108 512 aa13.09□□□□□ -0.31
GNE-206ENST00000543356 SPATA31D1Q6ZQQ2 1576 aa13.09□□□□□ -0.31
GNE-206ENST00000543356 WASHC2AQ641Q2 1341 aa13.08□□□□□ -0.31
GNE-206ENST00000543356 IQGAP1P46940 1657 aa13.08□□□□□ -0.32
GNE-206ENST00000543356 TRHP20396 242 aaPredicted RBP13.08□□□□□ -0.32
GNE-206ENST00000543356 CCDC7Q96M83 1385 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms